Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 1.0e-254 882.9 435 100.0
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 4.5e-141 505.4 390 65.6
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 4.9e-140 501.9 396 65.2
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 2.9e-132 476.1 386 62.7
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 6.5e-124 448.4 387 59.4
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 2.5e-123 446.4 389 59.4
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 7.7e-117 424.9 397 54.4
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 1.2e-114 417.5 393 54.2
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.1e-114 416.8 385 54.8
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.8e-113 413.7 386 53.4
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 8.2e-111 404.8 391 54.2
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 9.1e-110 401.4 384 54.9
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 5.9e-109 398.7 381 50.9
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.7e-108 397.1 386 53.4
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 3.8e-108 396.0 381 53.8
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 5.0e-108 395.6 385 54.0
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 3.2e-107 392.9 385 52.2
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 3.2e-107 392.9 387 52.2
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 4.2e-107 392.5 391 52.4
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 9.4e-107 391.3 393 51.9
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 7.9e-106 388.3 386 53.4
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.4e-105 387.5 381 53.0
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 6.7e-105 385.2 391 51.2
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 6.7e-105 385.2 389 51.7
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 2.0e-104 383.6 386 52.8
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 2.0e-104 383.6 398 51.3
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 2.6e-104 383.3 387 53.5
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 5.7e-104 382.1 392 53.1
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 7.4e-104 381.7 388 49.7
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 2.2e-103 380.2 387 52.2
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 6.3e-103 378.6 384 52.3
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 5.3e-102 375.6 382 51.8
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.6e-101 373.2 382 51.6
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.6e-101 373.2 382 51.8
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 3.5e-101 372.9 361 51.5
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 5.9e-101 372.1 403 48.6
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.7e-100 370.5 391 47.6
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 2.9e-100 369.8 384 51.6
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 5.0e-100 369.0 391 47.3
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 5.0e-100 369.0 369 50.4
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 1.1e-99 367.9 381 51.4
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 1.5e-99 367.5 377 50.4
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 9.4e-99 364.8 355 55.2
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 6.1e-98 362.1 384 49.0
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.6e-93 346.7 385 47.8
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 5.9e-93 345.5 381 47.5
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 1.0e-92 344.7 327 54.7
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.7e-92 344.0 310 55.5
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.5e-91 340.9 310 54.8
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.9e-91 340.5 371 48.0
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 2.0e-88 330.5 389 45.0
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 7.5e-88 328.6 389 45.0
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 6.3e-87 325.5 311 53.7
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 4.5e-85 319.3 390 44.1
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.1e-83 314.7 310 52.3
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.9e-83 313.9 393 44.3
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 2.5e-83 313.5 393 44.3
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 2.5e-83 313.5 393 44.3
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 7.2e-83 312.0 393 44.0
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 2.1e-82 310.5 391 43.7
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 2.0e-80 303.9 285 53.0
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 3.1e-78 296.6 361 43.2
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 2.7e-77 293.5 356 43.8
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 3.8e-76 289.7 361 41.3
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 1.6e-74 284.3 368 41.0
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 8.0e-74 282.0 307 52.8
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 1.1e-70 271.6 376 40.7
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.9e-69 265.8 380 41.3
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 1.0e-65 255.0 342 40.1
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 2.3e-44 184.1 197 49.7
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 8.9e-41 172.2 236 41.1
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 1.7e-23 114.8 132 43.2
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.4e-09 68.6 382 22.5
SEGI_09302 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 6.9e-09 66.2 198 28.3
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 1.0e-07 62.4 135 26.7
Mapoly0014s0188 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.3e-07 62.0 366 23.0
Medtr6g004660 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-06 57.8 142 31.7
CSS0035483 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 4.2e-06 57.0 197 26.4
Medtr6g021880 Medicago truncatula HOM05D000007 ORTHO05D000017 5.5e-06 56.6 180 26.1
Ciclev10006734m.g Citrus clementina HOM05D000007 ORTHO05D000017 7.2e-06 56.2 135 30.4


User provided reference genes

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