Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.8e-76 289.3 154 100.0
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.7e-47 193.0 156 68.6
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 3.0e-39 165.6 155 61.3
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.5e-35 153.3 159 64.2
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 2.1e-32 142.9 154 60.4
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 1.7e-31 139.8 159 50.9
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 1.6e-29 133.3 155 55.5
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 8.1e-29 131.0 162 54.3
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 5.2e-28 128.3 154 49.4
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 8.9e-28 127.5 157 52.9
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 8.4e-26 120.9 158 47.5
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 1.1e-25 120.6 160 48.1
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 2.4e-25 119.4 158 47.5
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 7.1e-25 117.9 162 43.8
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 9.3e-25 117.5 159 44.7
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 7.8e-24 114.4 161 44.1
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 5.6e-22 108.2 160 46.2
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 5.6e-22 108.2 157 46.5
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 7.3e-22 107.8 164 44.5
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 3.1e-20 102.4 183 38.3
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 4.0e-20 102.1 124 49.2
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 5.3e-20 101.7 157 43.9
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 9.0e-20 100.9 157 42.7
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 2.6e-19 99.4 158 43.0
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 9.9e-19 97.4 165 43.0
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 9.9e-19 97.4 163 42.3
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 6.4e-18 94.7 158 41.1
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 3.2e-17 92.4 162 41.4
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 3.2e-17 92.4 162 41.4
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 3.2e-17 92.4 162 39.5
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 4.2e-17 92.0 156 42.3
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 7.1e-17 91.3 164 41.5
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 1.6e-16 90.1 155 44.5
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 2.7e-16 89.4 157 40.8
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 2.7e-16 89.4 162 40.7
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 6.0e-16 88.2 154 40.3
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 1.0e-15 87.4 157 36.9
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 1.3e-15 87.0 164 39.6
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 2.3e-15 86.3 153 44.4
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 8.7e-15 84.3 162 40.1
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 1.1e-14 84.0 161 41.6
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 1.1e-14 84.0 160 36.9
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 2.5e-14 82.8 167 40.7
TAR626G1415 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.5e-14 82.8 86 62.8
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 5.6e-14 81.6 174 39.7
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 7.3e-14 81.3 161 41.0
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 7.3e-14 81.3 162 37.7
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.6e-13 80.1 143 37.8
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 1.6e-13 80.1 157 34.4
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 2.1e-13 79.7 157 38.9
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 2.8e-13 79.3 157 33.8
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 4.8e-13 78.6 158 37.3
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 4.8e-13 78.6 89 48.3
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 1.1e-12 77.4 91 52.7
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 1.8e-12 76.6 170 38.8
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 4.0e-12 75.5 159 38.4
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 4.0e-12 75.5 161 37.9
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 5.3e-12 75.1 156 33.3
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 5.3e-12 75.1 150 37.3
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 6.9e-12 74.7 141 37.6
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 9.0e-12 74.3 205 37.1
DCAR_017766 Daucus carota HOM05D007673 ORTHO05D009278 1.2e-11 73.9 99 48.5
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 2.6e-11 72.8 156 34.0
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 3.4e-11 72.4 157 36.9
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 3.4e-11 72.4 157 36.9
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 4.5e-11 72.0 153 37.9
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 9.9e-11 70.9 156 37.2
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 9.9e-11 70.9 183 33.9
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 1.3e-10 70.5 157 35.0
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 2.2e-10 69.7 157 39.5
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 6.4e-10 68.2 147 40.1
Potri.006G059900 Populus trichocarpa HOM05D012006 ORTHO05D014172 8.4e-10 67.8 82 42.7
Migut.J01263 Erythranthe guttata HOM05D007673 ORTHO05D009278 1.4e-09 67.0 155 39.4
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.4e-09 67.0 184 34.2
Lsat_1_v5_gn_8_63020 Lactuca sativa HOM05D007673 ORTHO05D009278 9.3e-09 64.3 98 43.9
Migut.K00385 Erythranthe guttata HOM05D007673 ORTHO05D009278 2.7e-08 62.8 58 55.2
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 1.3e-07 60.5 168 33.9
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 1.3e-07 60.5 78 43.6
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 1.3e-07 60.5 158 33.5
SalBow1G8253 Salvia bowleyana HOM05D007673 ORTHO05D009278 2.3e-07 59.7 157 36.3
ECA236G3490 Erigeron canadensis HOM05D007673 ORTHO05D009278 6.7e-07 58.2 90 42.2
PGR102G0920 Punica granatum HOM05D007673 ORTHO05D009278 6.7e-07 58.2 171 35.7
AUR62011243 Chenopodium quinoa HOM05D022392 ORTHO05D009278 1.1e-06 57.4 179 30.7
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 1.5e-06 57.0 159 34.0
HPP92_017273 Vanilla planifolia HOM05D007673 ORTHO05D009278 1.9e-06 56.6 150 34.0
CDE05G1811 Ceratophyllum demersum HOM05D007673 ORTHO05D009278 7.4e-06 54.7 138 33.3


User provided reference genes

Program Settings