Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0332 Trochodendron aralioides HOM05D005464 ORTHO05D006803 5.9e-65 250.8 129 100.0
Nn8g39510 Nelumbo nucifera HOM05D005464 ORTHO05D006803 4.5e-41 171.4 126 66.7
Dinv30606 Davidia involucrata HOM05D005464 ORTHO05D006803 1.0e-40 170.2 127 66.9
PSO170G0224 Papaver somniferum HOM05D005464 ORTHO05D006803 1.1e-39 166.8 114 70.2
PSO017G6540 Papaver somniferum HOM05D005464 ORTHO05D006803 2.5e-39 165.6 113 70.8
Aqoxy7G02293 Aquilegia oxysepala HOM05D005464 ORTHO05D006803 9.4e-39 163.7 126 67.5
Nn2g12091 Nelumbo nucifera HOM05D000467 ORTHO05D000379 3.6e-38 161.8 126 65.1
Actinidia15983 Actinidia chinensis HOM05D005464 ORTHO05D006803 4.8e-35 151.4 126 57.1
QL05p029765 Quercus lobata HOM05D005464 ORTHO05D006803 4.8e-35 151.4 119 62.2
QL05p030112 Quercus lobata HOM05D005464 ORTHO05D006803 4.8e-35 151.4 119 62.2
COL.COLO4_11947 Corchorus olitorius HOM05D005464 ORTHO05D006803 3.1e-34 148.7 114 62.3
Rhsim12G0191100 Rhododendron simsii HOM05D005464 ORTHO05D006803 3.1e-34 148.7 113 65.5
Gohir.D05G124200 Gossypium hirsutum HOM05D005464 ORTHO05D006803 1.2e-33 146.7 117 59.8
Thecc.06G025100 Theobroma cacao HOM05D000467 ORTHO05D000379 1.6e-33 146.4 116 62.1
Gohir.A05G123300 Gossypium hirsutum HOM05D005464 ORTHO05D006803 7.7e-33 144.1 116 59.5
Gorai.009G128200 Gossypium raimondii HOM05D005464 ORTHO05D006803 7.7e-33 144.1 116 59.5
CiPaw.02G157400 Carya illinoinensis HOM05D005464 ORTHO05D006803 1.7e-32 142.9 121 62.8
GSVIVG01017342001 Vitis vinifera HOM05D005464 ORTHO05D006803 2.3e-32 142.5 114 64.9
RcHm_v2.0_Chr2g0135251 Rosa chinensis HOM05D005464 ORTHO05D006803 3.8e-32 141.7 117 58.1
Duzib160G0683 Durio zibethinus HOM05D005464 ORTHO05D006803 5.0e-32 141.4 116 58.6
FAN05G5161 Fragaria x ananassa HOM05D005464 ORTHO05D006803 6.5e-32 141.0 130 53.8
Cc04_g04410 Coffea canephora HOM05D005464 ORTHO05D006803 8.6e-32 140.6 126 54.8
DCAR_021346 Daucus carota HOM05D005464 ORTHO05D006803 8.6e-32 140.6 112 62.5
Lsat_1_v5_gn_4_89921 Lactuca sativa HOM05D005464 ORTHO05D006803 2.5e-31 139.0 109 60.6
Manes.11G057000 Manihot esculenta HOM05D005464 ORTHO05D006803 2.5e-31 139.0 116 58.6
Oeu045134.1 Olea europaea HOM05D005464 ORTHO05D006803 2.5e-31 139.0 126 52.4
Sc06g0005910 Simmondsia chinensis HOM05D005464 ORTHO05D006803 4.2e-31 138.3 125 50.4
MD17G1212300 Malus domestica HOM05D005464 ORTHO05D006803 5.5e-31 137.9 120 60.0
Cfa001959 Carpinus fangiana HOM05D005464 ORTHO05D006803 1.2e-30 136.7 119 59.7
FvH4_6g29660 Fragaria vesca HOM05D005464 ORTHO05D006803 2.1e-30 136.0 117 55.6
FAN09G2673 Fragaria x ananassa HOM05D005464 ORTHO05D006803 2.1e-30 136.0 117 55.6
FAN14G5059 Fragaria x ananassa HOM05D005464 ORTHO05D006803 2.1e-30 136.0 117 55.6
Eucgr.F03878 Eucalyptus grandis HOM05D005464 ORTHO05D006803 2.8e-30 135.6 127 52.0
MSTRG.22747 Avicennia marina HOM05D005464 ORTHO05D006803 4.7e-30 134.8 126 50.0
Migut.I00762 Erythranthe guttata HOM05D005464 ORTHO05D006803 6.1e-30 134.4 126 50.0
Prupe.3G087600 Prunus persica HOM05D005464 ORTHO05D006803 8.0e-30 134.0 120 58.3
Atru.chr1.2934 Acer truncatum HOM05D005464 ORTHO05D006803 1.0e-29 133.7 115 54.8
TWI12G0099 Tripterygium wilfordii HOM05D005464 ORTHO05D006803 1.0e-29 133.7 124 52.4
Psat5g302720 Pisum sativum HOM05D005464 ORTHO05D006803 1.4e-29 133.3 131 48.9
CANSAT56G0380 Cannabis sativa HOM05D005464 ORTHO05D006803 1.8e-29 132.9 114 56.1
Cpa.g.sc10.270 Carica papaya HOM05D005464 ORTHO05D006803 1.8e-29 132.9 116 56.0
EL10Ac9g21898 Beta vulgaris HOM05D005464 ORTHO05D006803 2.3e-29 132.5 126 50.8
Lj9P500T36 Lonicera japonica HOM05D005464 ORTHO05D006803 2.3e-29 132.5 111 60.4
VMungo1080G0510 Vigna mungo HOM05D005464 ORTHO05D006803 2.3e-29 132.5 129 50.4
Lj3g0027830 Lotus japonicus HOM05D005464 ORTHO05D006803 6.8e-29 131.0 119 50.4
ECA232G3027 Erigeron canadensis HOM05D005464 ORTHO05D006803 1.2e-28 130.2 106 60.4
Phvul.005G178300 Phaseolus vulgaris HOM05D005464 ORTHO05D006803 1.5e-28 129.8 129 48.8
Lalb_Chr22g0350841 Lupinus albus HOM05D005464 ORTHO05D006803 2.6e-28 129.0 124 50.8
PGR031G2541 Punica granatum HOM05D005464 ORTHO05D006803 2.6e-28 129.0 116 57.8
PGR102G0885 Punica granatum HOM05D005464 ORTHO05D006803 2.6e-28 129.0 117 52.1
Glyma.15G007300 Glycine max HOM05D005464 ORTHO05D006803 3.4e-28 128.6 117 49.6
AUR62016335 Chenopodium quinoa HOM05D005464 ORTHO05D006803 4.4e-28 128.3 126 51.6
Haze_16562 Corylus avellana HOM05D005464 ORTHO05D006803 4.4e-28 128.3 130 55.4
Sopen06g025430 Solanum pennellii HOM05D005464 ORTHO05D006803 7.5e-28 127.5 115 57.4
Eucgr.J03066 Eucalyptus grandis HOM05D005464 ORTHO05D006803 9.8e-28 127.1 126 52.4
AUR62011516 Chenopodium quinoa HOM05D005464 ORTHO05D006803 1.3e-27 126.7 126 49.2
MBI14_g16402_MAGBIO Magnolia biondii HOM05D005464 ORTHO05D006803 1.3e-27 126.7 126 54.8
Medtr2g103910 Medicago truncatula HOM05D005464 ORTHO05D006803 1.3e-27 126.7 120 49.2
Solyc06g068160.3 Solanum lycopersicum HOM05D005464 ORTHO05D006803 1.7e-27 126.3 115 56.5
CAN.G1503.8 Capsicum annuum HOM05D005464 ORTHO05D006803 2.2e-27 125.9 119 52.9
SGA_v2.0_scaffold5G02698 Striga asiatica HOM05D005464 ORTHO05D006803 2.2e-27 125.9 126 46.8
Lalb_Chr14g0373811 Lupinus albus HOM05D005464 ORTHO05D006803 2.8e-27 125.6 120 47.5
HanXRQChr16g0500301 Helianthus annuus HOM05D005464 ORTHO05D006803 4.9e-27 124.8 106 57.5
Peaxi162Scf00207g00638 Petunia axillaris HOM05D005464 ORTHO05D006803 4.9e-27 124.8 112 58.0
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 6.3e-27 124.4 116 49.1
Glyma.13G365800 Glycine max HOM05D005464 ORTHO05D006803 8.3e-27 124.0 105 53.3
PGSC0003DMG400028509 Solanum tuberosum HOM05D005464 ORTHO05D006803 1.1e-26 123.6 112 57.1
Nitab4.5_0000373g0080 Nicotiana tabacum HOM05D005464 ORTHO05D006803 1.4e-26 123.2 117 54.7
TPR.G37199 Trifolium pratense HOM05D005464 ORTHO05D006803 3.1e-26 122.1 148 44.6
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea HOM05D005464 ORTHO05D006803 7.0e-26 120.9 116 50.0
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea HOM05D005464 ORTHO05D006803 7.0e-26 120.9 116 50.0
Nitab4.5_0006769g0010 Nicotiana tabacum HOM05D005464 ORTHO05D006803 1.6e-25 119.8 119 53.8
unitig_0.g1114 Utricularia gibba HOM05D005464 ORTHO05D006803 2.7e-25 119.0 113 50.4
BcaB02g08721 Brassica carinata HOM05D005464 ORTHO05D006803 3.5e-25 118.6 116 48.3
CARHR074410 Cardamine hirsuta HOM05D005464 ORTHO05D006803 4.5e-25 118.2 109 51.4
Atru.chr1.2936 Acer truncatum HOM05D005464 ORTHO05D006803 1.7e-24 116.3 115 49.6
BcaC08g47570 Brassica carinata HOM05D005464 ORTHO05D006803 2.3e-24 115.9 116 48.3
C06p54250 Brassica napus HOM05D005464 ORTHO05D006803 2.3e-24 115.9 116 48.3
BolC6t40438H Brassica oleracea HOM05D005464 ORTHO05D006803 2.3e-24 115.9 116 48.3
Sp5g35710 Schrenkiella parvula HOM05D005464 ORTHO05D006803 2.9e-24 115.5 114 47.4
Hund06557 Selenicereus undatus HOM05D005464 ORTHO05D006803 2.9e-24 115.5 113 49.6
THA.LOC104812509 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 2.9e-24 115.5 127 49.6
Thhalv10019455m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 5.0e-24 114.8 113 48.7
AT1G80090 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 8.6e-24 114.0 109 51.4
A07p45420 Brassica napus HOM05D005464 ORTHO05D006803 1.5e-23 113.2 116 46.6
Ca_01055_v3 Cicer arietinum L. HOM05D005464 ORTHO05D006803 1.5e-23 113.2 120 47.5
MELO3C017863.2 Cucumis melo HOM05D005464 ORTHO05D006803 1.5e-23 113.2 117 47.0
AT1G15330 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 5.6e-23 111.3 111 51.4
Zm00001eb232620 Zea mays HOM05D005464 ORTHO05D006803 9.5e-23 110.5 108 50.9
SHI11227 Sapria himalayana HOM05D005464 ORTHO05D006803 1.2e-22 110.2 113 49.6
ATR0800G035 Amborella trichopoda HOM05D005464 ORTHO05D006803 3.6e-22 108.6 112 54.5
Aa31LG4G370 Aethionema arabicum HOM05D005464 ORTHO05D006803 6.1e-22 107.8 109 47.7
HPP92_016981 Vanilla planifolia HOM05D005464 ORTHO05D006803 6.1e-22 107.8 107 56.1
BcaC05g25495 Brassica carinata HOM05D005464 ORTHO05D006803 8.0e-22 107.5 111 49.5
C05p13460 Brassica napus HOM05D005464 ORTHO05D006803 8.0e-22 107.5 111 50.5
BolC5t30083H Brassica oleracea HOM05D005464 ORTHO05D006803 8.0e-22 107.5 111 50.5
Nn1g00750 Nelumbo nucifera HOM05D005464 ORTHO05D006803 8.0e-22 107.5 89 60.7
Sp1g13650 Schrenkiella parvula HOM05D005464 ORTHO05D006803 8.0e-22 107.5 101 49.5
AL1G27420 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.4e-21 106.7 111 49.5
THA.LOC104812511 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 1.4e-21 106.7 116 47.4
BcaC05g25470 Brassica carinata HOM05D005464 ORTHO05D006803 2.3e-21 105.9 103 48.5
A06p11340 Brassica napus HOM05D005464 ORTHO05D006803 2.3e-21 105.9 101 50.5
BraA06t24313Z Brassica rapa HOM05D005464 ORTHO05D006803 2.3e-21 105.9 101 50.5
Carub.0002s2743 Capsella rubella HOM05D005464 ORTHO05D006803 2.3e-21 105.9 104 48.1
VMungo1127G1748 Vigna mungo HOM05D005464 ORTHO05D006803 2.3e-21 105.9 129 41.1
CARHR015860 Cardamine hirsuta HOM05D005464 ORTHO05D006803 5.2e-21 104.8 99 49.5
ClCG07G012450 Citrullus lanatus HOM05D005464 ORTHO05D006803 8.9e-21 104.0 115 47.0
Carub.0001s1508 Capsella rubella HOM05D005464 ORTHO05D006803 1.5e-20 103.2 99 49.5
Aa31LG7G100 Aethionema arabicum HOM05D005464 ORTHO05D006803 2.0e-20 102.8 102 52.9
Thhalv10008048m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 3.4e-20 102.1 99 48.5
HPP92_010901 Vanilla planifolia HOM05D005464 ORTHO05D006803 7.5e-20 100.9 110 50.9
CsaV3_4G001710 Cucumis sativus L. HOM05D005464 ORTHO05D006803 1.7e-19 99.8 117 43.6
Os02g0158900 Oryza sativa ssp. japonica HOM05D005464 ORTHO05D006803 4.9e-19 98.2 125 46.4
vmacro16896 Vaccinium macrocarpon HOM05D005464 ORTHO05D006803 1.8e-18 96.3 113 46.9
Hma1.2p1_1144F.1_g261310 Hydrangea macrophylla HOM05D005464 ORTHO05D006803 1.3e-16 90.1 70 68.6
CBR_g24374 Chara braunii HOM05D005464 ORTHO05D006803 5.6e-15 84.7 110 43.6
Mapoly0007s0086 Marchantia polymorpha HOM05D005464 ORTHO05D006803 9.5e-15 84.0 109 36.7
BraA07t32046Z Brassica rapa HOM05D005464 ORTHO05D006803 1.6e-14 83.2 116 39.7
SMO201G0050 Selaginella moellendorffii HOM05D005464 ORTHO05D006803 6.2e-14 81.3 118 37.3
Pp3c3_23830 Physcomitrium patens HOM05D005464 ORTHO05D006803 1.1e-13 80.5 118 39.8
Pp3c13_16980 Physcomitrium patens HOM05D005464 ORTHO05D006803 1.2e-12 77.0 118 39.0
Ciclev10026304m.g Citrus clementina HOM05D005464 ORTHO05D006803 9.8e-12 73.9 61 59.0
AL2G41440 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.7e-11 73.2 65 52.3
PGR102G1999 Punica granatum HOM05D005464 ORTHO05D006803 8.3e-11 70.9 57 50.9
Psat6g000160 Pisum sativum HOM05D005464 ORTHO05D006803 3.0e-08 62.4 81 40.7
SEGI_39315 Sequoiadendron giganteum HOM05D005464 ORTHO05D006803 9.5e-07 57.4 57 54.4


User provided reference genes

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