Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0271 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.0e-41 172.2 95 100.0
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 9.7e-33 143.3 86 88.4
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 2.8e-32 141.7 86 88.4
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 3.7e-32 141.4 86 87.2
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 6.3e-32 140.6 86 87.2
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 1.4e-31 139.4 86 87.2
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.8e-31 139.0 86 84.9
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.8e-31 139.0 86 84.9
Lj6A103G48 Lonicera japonica HOM05D003653 ORTHO05D004249 1.8e-31 139.0 86 86.0
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 3.1e-31 138.3 86 84.9
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 3.1e-31 138.3 86 84.9
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 3.1e-31 138.3 86 84.9
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 3.1e-31 138.3 86 84.9
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 7.0e-31 137.1 86 84.9
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 7.0e-31 137.1 88 81.8
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 9.1e-31 136.7 86 86.0
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 9.1e-31 136.7 86 82.6
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 9.1e-31 136.7 86 84.9
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 9.1e-31 136.7 86 83.7
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 1.2e-30 136.3 86 83.7
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 1.2e-30 136.3 86 84.9
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 2.0e-30 135.6 86 82.6
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 2.0e-30 135.6 88 79.5
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 2.6e-30 135.2 86 84.9
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 2.6e-30 135.2 86 86.0
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 2.6e-30 135.2 86 81.4
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 2.6e-30 135.2 86 81.4
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 2.6e-30 135.2 88 78.4
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 4.5e-30 134.4 86 83.7
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 5.9e-30 134.0 86 83.7
RcHm_v2.0_Chr2g0096141 Rosa chinensis HOM05D003653 ORTHO05D004249 5.9e-30 134.0 86 82.6
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 5.9e-30 134.0 86 82.6
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 7.7e-30 133.7 86 81.4
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 7.7e-30 133.7 86 84.9
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 7.7e-30 133.7 86 80.2
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 1.7e-29 132.5 86 79.1
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 1.7e-29 132.5 86 79.1
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 1.7e-29 132.5 86 81.4
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 1.7e-29 132.5 86 79.1
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 1.7e-29 132.5 86 82.6
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 2.2e-29 132.1 88 77.3
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 2.2e-29 132.1 88 77.3
CSS0022852 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 2.9e-29 131.7 86 82.6
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.9e-29 131.7 86 79.1
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 2.9e-29 131.7 88 79.5
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 3.8e-29 131.3 86 82.6
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 3.8e-29 131.3 86 80.2
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 5.0e-29 131.0 86 77.9
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 5.0e-29 131.0 86 79.1
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 5.0e-29 131.0 86 77.9
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 5.0e-29 131.0 86 79.1
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 6.5e-29 130.6 86 77.9
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 6.5e-29 130.6 86 77.9
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 6.5e-29 130.6 86 80.2
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 6.5e-29 130.6 86 79.1
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 6.5e-29 130.6 86 77.9
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 8.5e-29 130.2 86 79.1
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 8.5e-29 130.2 86 77.9
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 8.5e-29 130.2 86 81.4
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 1.1e-28 129.8 86 80.2
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 1.1e-28 129.8 86 80.2
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.5e-28 129.4 86 80.2
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 1.5e-28 129.4 86 77.9
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 1.5e-28 129.4 86 77.9
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 1.5e-28 129.4 86 76.7
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.5e-28 129.4 86 76.7
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 1.5e-28 129.4 88 76.1
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 1.9e-28 129.0 86 76.7
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.9e-28 129.0 86 76.7
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 1.9e-28 129.0 86 76.7
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.9e-28 129.0 86 76.7
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 1.9e-28 129.0 86 76.7
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.5e-28 128.6 86 77.9
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 79.1
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 77.9
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 76.7
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 4.2e-28 127.9 86 75.6
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 5.5e-28 127.5 86 79.1
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 7.2e-28 127.1 86 75.6
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 7.2e-28 127.1 86 75.6
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 9.4e-28 126.7 86 76.7
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 9.4e-28 126.7 86 79.1
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 9.4e-28 126.7 86 74.4
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 1.2e-27 126.3 86 75.6
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 1.2e-27 126.3 86 80.2
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.6e-27 125.9 86 76.7
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.6e-27 125.9 86 74.4
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 2.1e-27 125.6 86 75.6
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.1e-27 125.6 86 76.7
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 4.7e-27 124.4 86 74.4
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 4.7e-27 124.4 86 75.6
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 4.7e-27 124.4 86 74.4
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 6.1e-27 124.0 86 74.4
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 1.0e-26 123.2 86 79.1
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.8e-26 122.5 86 79.1
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.8e-26 122.5 86 79.1
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 1.8e-26 122.5 79 79.7
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 1.8e-26 122.5 86 74.4
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 2.3e-26 122.1 86 74.4
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 2.3e-26 122.1 85 76.5
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 3.0e-26 121.7 86 76.7
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 4.0e-26 121.3 86 73.3
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 8.8e-26 120.2 86 75.6
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 1.2e-25 119.8 86 77.9
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 2.0e-25 119.0 86 76.7
Haze_16164 Corylus avellana HOM05D003653 ORTHO05D004249 4.4e-25 117.9 111 62.2
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 5.7e-25 117.5 85 74.1
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 5.7e-25 117.5 85 74.1
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 7.5e-25 117.1 86 74.4
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 2.2e-24 115.5 86 70.9
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 8.2e-24 113.6 85 70.6
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 8.2e-24 113.6 71 81.7
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 2.0e-22 109.0 88 63.6
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 7.2e-20 100.5 90 56.7
SEGI_20750 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 6.1e-19 97.4 71 67.6
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 5.2e-18 94.4 86 64.0
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 4.4e-17 91.3 113 47.8
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 3.1e-15 85.1 66 69.7
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 7.0e-15 84.0 86 51.2
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 2.7e-14 82.0 66 68.2
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.3e-13 79.7 97 45.4
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 3.8e-13 78.2 66 65.2
MBI08_g05369_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 2.8e-11 72.0 51 78.4
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 2.2e-08 62.4 50 66.0
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 2.7e-06 55.5 111 37.8


User provided reference genes

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