Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 2.3e-139 498.8 235 100.0
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 2.9e-118 428.7 235 84.7
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 2.1e-116 422.5 235 83.0
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 2.1e-116 422.5 232 83.2
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 1.2e-113 413.3 232 81.5
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 3.6e-113 411.8 232 81.5
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 8.1e-113 410.6 234 80.3
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 6.8e-112 407.5 229 81.2
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 6.8e-112 407.5 232 81.0
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.9e-112 407.1 234 79.9
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 2.0e-111 406.0 233 80.3
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 3.4e-111 405.2 231 79.7
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.9e-111 403.7 234 79.5
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 9.9e-111 403.7 230 81.7
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 1.3e-110 403.3 232 81.0
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 2.2e-110 402.5 230 81.7
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 2.9e-110 402.1 236 79.2
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.7e-110 401.7 234 79.1
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 4.9e-110 401.4 235 78.3
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.4e-110 400.6 232 79.7
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.4e-109 399.8 228 81.1
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 4.1e-109 398.3 233 80.7
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 5.4e-109 397.9 228 80.7
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.6e-108 396.4 230 79.1
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 2.3e-107 392.5 232 78.4
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 6.6e-107 391.0 227 79.3
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.1e-106 390.2 226 79.2
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 1.5e-106 389.8 235 75.7
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 2.5e-106 389.0 235 74.9
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 3.3e-106 388.7 224 80.4
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 7.3e-106 387.5 232 80.2
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.4e-104 383.3 211 83.4
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 2.4e-104 382.5 232 75.0
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 2.4e-104 382.5 232 75.0
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 9.9e-103 377.1 230 75.7
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.3e-102 376.7 230 77.8
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.7e-102 376.3 236 72.9
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 2.2e-102 375.9 287 63.8
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 2.9e-102 375.6 221 77.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 6.4e-102 374.4 227 75.8
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 1.6e-100 369.8 226 73.9
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 7.8e-100 367.5 235 71.5
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 8.7e-99 364.0 225 74.2
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 8.7e-99 364.0 237 70.0
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 4.3e-98 361.7 251 68.1
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 1.6e-97 359.8 235 71.1
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 3.1e-96 355.5 235 69.4
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 1.2e-95 353.6 253 65.6
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 4.4e-95 351.7 227 73.1
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 8.4e-94 347.4 237 69.2
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 1.9e-93 346.3 228 71.1
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.7e-91 339.7 235 65.5
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 2.3e-91 339.3 205 75.6
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 8.7e-91 337.4 234 66.2
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 2.8e-89 332.4 229 66.8
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 3.6e-89 332.0 231 66.2
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 1.4e-88 330.1 221 71.0
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 3.1e-88 328.9 236 64.0
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 7.6e-87 324.3 236 66.9
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 4.2e-85 318.5 176 85.2
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 3.0e-83 312.4 231 65.4
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 1.5e-82 310.1 224 60.7
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 1.5e-82 310.1 221 62.9
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.5e-82 310.1 224 62.5
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.1e-77 293.9 220 62.3
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 3.2e-77 292.4 221 59.7
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.6e-76 290.0 233 60.9
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 2.1e-76 289.7 180 76.7
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 7.9e-76 287.7 239 56.9
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 8.7e-75 284.3 225 58.7
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 2.1e-73 279.6 225 57.8
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.1e-72 277.3 182 70.9
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 5.3e-72 275.0 232 56.0
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.4e-71 272.3 156 82.7
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 2.2e-70 269.6 248 54.8
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 2.3e-67 259.6 221 58.4
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 5.7e-58 228.4 135 77.8
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.7e-57 226.9 125 83.2
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 8.2e-57 224.6 146 69.2
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.1e-56 224.2 131 77.9
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 1.0e-51 207.6 110 86.4
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 7.4e-50 201.4 200 52.0
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 9.4e-45 184.5 194 46.4
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 3.6e-44 182.6 132 61.4
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.4e-43 180.6 102 81.4
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 3.2e-37 159.5 124 63.7
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 3.4e-26 122.9 69 72.5
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 4.1e-24 115.9 212 37.7
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 4.5e-23 112.5 96 51.0
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 2.5e-21 106.7 93 47.3
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 4.3e-21 105.9 107 56.1
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 9.5e-21 104.8 86 58.1
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 3.4e-18 96.3 60 70.0
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 2.2e-09 67.0 53 67.9
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 2.4e-08 63.5 49 57.1


User provided reference genes

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