Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 2.1e-34 148.7 88 100.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.1e-25 119.8 80 90.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 3.1e-25 118.2 80 87.5
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.1e-25 118.2 80 88.8
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.1e-25 118.2 80 88.8
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.3e-25 117.5 80 83.8
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.9e-25 117.1 79 83.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.0e-25 116.7 80 85.0
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.0e-25 116.7 80 85.0
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 9.0e-25 116.7 80 88.8
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.2e-24 116.3 79 84.8
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.6e-24 115.2 80 86.2
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 3.4e-24 114.8 80 83.8
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 3.4e-24 114.8 80 87.5
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 4.5e-24 114.4 80 80.0
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 4.5e-24 114.4 80 86.2
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.8e-24 114.0 79 84.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 7.6e-24 113.6 80 86.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.7e-23 112.5 76 88.2
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.7e-23 112.5 80 86.2
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.7e-23 112.5 80 85.0
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 2.9e-23 111.7 77 85.7
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 2.9e-23 111.7 80 86.2
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 3.8e-23 111.3 80 81.2
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 4.9e-23 110.9 80 83.8
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 4.9e-23 110.9 80 80.0
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 4.9e-23 110.9 80 83.8
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 6.5e-23 110.5 80 82.5
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 8.4e-23 110.2 80 81.2
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 8.4e-23 110.2 80 80.0
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 8.4e-23 110.2 80 80.0
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 8.4e-23 110.2 80 80.0
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 8.4e-23 110.2 76 89.5
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.1e-22 109.8 80 82.5
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.1e-22 109.8 80 82.5
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.1e-22 109.8 80 85.0
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.4e-22 109.4 77 84.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.4e-22 109.4 79 81.0
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.4e-22 109.4 77 84.4
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.4e-22 109.4 79 75.9
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.9e-22 109.0 80 82.5
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 1.9e-22 109.0 79 82.3
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 2.5e-22 108.6 77 84.4
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 2.5e-22 108.6 77 84.4
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 2.5e-22 108.6 77 84.4
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 2.5e-22 108.6 77 84.4
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 2.5e-22 108.6 77 84.4
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 2.5e-22 108.6 77 84.4
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.5e-22 108.6 80 78.8
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 2.5e-22 108.6 76 84.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 3.2e-22 108.2 80 60.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 3.2e-22 108.2 80 82.5
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 3.2e-22 108.2 76 82.9
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 4.2e-22 107.8 79 78.5
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 4.2e-22 107.8 79 82.3
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 4.2e-22 107.8 79 83.5
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 4.2e-22 107.8 78 82.1
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.2e-22 107.8 77 81.8
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.2e-22 107.8 77 79.2
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.5e-22 107.5 78 79.5
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.5e-22 107.5 78 79.5
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 5.5e-22 107.5 80 81.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 7.1e-22 107.1 77 83.1
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 7.1e-22 107.1 77 83.1
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 7.1e-22 107.1 77 83.1
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 7.1e-22 107.1 75 88.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 7.1e-22 107.1 76 81.6
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 9.3e-22 106.7 87 77.0
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 9.3e-22 106.7 77 83.1
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.2e-21 106.3 79 81.0
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.2e-21 106.3 79 83.5
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.2e-21 106.3 77 84.4
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.6e-21 105.9 80 78.8
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.6e-21 105.9 77 83.1
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.6e-21 105.9 76 81.6
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 2.1e-21 105.5 79 83.5
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 4.6e-21 104.4 79 77.2
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 4.6e-21 104.4 79 77.2
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 6.1e-21 104.0 76 82.9
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 6.1e-21 104.0 79 81.0
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.0e-20 103.2 75 82.7
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.3e-20 102.8 79 70.9
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.8e-20 102.4 75 82.7
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.8e-20 102.4 80 78.8
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.8e-20 102.4 75 80.0
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.8e-20 102.4 76 81.6
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.8e-20 102.4 80 77.5
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.3e-20 102.1 75 82.7
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.0e-20 101.7 80 77.5
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 3.9e-20 101.3 80 76.2
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 5.1e-20 100.9 76 80.3
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 5.1e-20 100.9 75 82.7
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 6.7e-20 100.5 76 77.6
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.1e-19 99.8 77 76.6
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.5e-19 98.6 80 77.5
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.6e-18 95.9 77 77.9
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 3.7e-18 94.7 47 78.7
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 4.8e-18 94.4 75 80.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.8e-17 92.4 75 77.3
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 4.5e-16 87.8 46 71.7
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 5.9e-16 87.4 75 72.0
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.2e-15 85.5 74 73.0
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 2.2e-15 85.5 77 70.1
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 9.4e-14 80.1 72 68.1
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 4.2e-06 54.7 58 44.8


User provided reference genes

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