Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0180 Trochodendron aralioides HOM05D000068 ORTHO05D004505 2.5e-96 355.5 188 100.0
TAR629G1625 Trochodendron aralioides HOM05D000068 ORTHO05D004505 2.7e-42 176.0 172 66.3
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.6e-42 175.3 175 64.0
Dinv34931 Davidia involucrata HOM05D000068 ORTHO05D004505 1.7e-36 156.8 172 57.0
Nn4g23472 Nelumbo nucifera HOM05D000068 ORTHO05D004505 1.7e-36 156.8 172 57.6
vmacro18139 Vaccinium macrocarpon HOM05D000068 ORTHO05D004505 2.2e-36 156.4 174 53.4
ATR0827G077 Amborella trichopoda HOM05D000068 ORTHO05D004505 2.9e-36 156.0 172 58.1
CiPaw.04G054100 Carya illinoinensis HOM05D000068 ORTHO05D004505 8.3e-36 154.5 174 56.3
Manes.02G056700 Manihot esculenta HOM05D000068 ORTHO05D004505 1.1e-35 154.1 172 55.2
Potri.017G097200 Populus trichocarpa HOM05D000068 ORTHO05D004505 1.4e-35 153.7 172 56.4
CSS0006194 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004505 1.9e-35 153.3 172 54.7
CSS0036214 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004505 1.9e-35 153.3 172 54.7
QL02p067219 Quercus lobata HOM05D000068 ORTHO05D004505 2.4e-35 152.9 172 55.8
QL93p0053_1000 Quercus lobata HOM05D000068 ORTHO05D004505 2.4e-35 152.9 172 55.8
Sabra17G0084600 Salix brachista HOM05D000068 ORTHO05D004505 2.4e-35 152.9 177 53.1
Sc10g0009670 Simmondsia chinensis HOM05D000068 ORTHO05D004505 2.4e-35 152.9 172 56.4
CANSAT64G1179 Cannabis sativa HOM05D000068 ORTHO05D004505 3.2e-35 152.5 172 55.2
CiPaw.03G087300 Carya illinoinensis HOM05D000068 ORTHO05D004505 4.1e-35 152.1 174 55.7
MBI16_g10856_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D004505 5.4e-35 151.8 159 60.4
SabraUnG0001800 Salix brachista HOM05D000068 ORTHO05D004505 9.2e-35 151.0 172 54.1
CDE09G0567 Ceratophyllum demersum HOM05D000068 ORTHO05D004505 1.2e-34 150.6 172 54.7
Rhsim08G0075800 Rhododendron simsii HOM05D000068 ORTHO05D004505 1.2e-34 150.6 172 53.5
Ciclev10019251m.g Citrus clementina HOM05D000068 ORTHO05D004505 1.6e-34 150.2 172 56.4
Actinidia26258 Actinidia chinensis HOM05D000068 ORTHO05D004505 2.1e-34 149.8 174 53.4
Oeu057200.2 Olea europaea HOM05D000068 ORTHO05D004505 2.1e-34 149.8 172 55.8
Peaxi162Scf00201g00424 Petunia axillaris HOM05D000068 ORTHO05D004505 2.1e-34 149.8 172 54.7
Thecc.03G104600 Theobroma cacao HOM05D000068 ORTHO05D004505 2.1e-34 149.8 172 54.7
Duzib187G1812 Durio zibethinus HOM05D000068 ORTHO05D004505 2.7e-34 149.4 172 54.1
Duzib264G0257 Durio zibethinus HOM05D000068 ORTHO05D004505 2.7e-34 149.4 172 54.7
Eucgr.K02537 Eucalyptus grandis HOM05D000068 ORTHO05D004505 2.7e-34 149.4 172 54.1
Gohir.A07G067200 Gossypium hirsutum HOM05D000068 ORTHO05D004505 3.5e-34 149.1 172 56.4
Lj5A134G71 Lonicera japonica HOM05D000068 ORTHO05D004505 4.6e-34 148.7 172 54.7
PGR004G2364 Punica granatum HOM05D000068 ORTHO05D004505 6.0e-34 148.3 172 54.7
GSVIVG01008121001 Vitis vinifera HOM05D000068 ORTHO05D004505 6.0e-34 148.3 172 53.5
Ah.11g047580 Amaranthus hybridus HOM05D000068 ORTHO05D004505 7.8e-34 147.9 172 54.7
PSO339G1772 Papaver somniferum HOM05D000068 ORTHO05D004505 1.0e-33 147.5 172 55.2
PGR044G2190 Punica granatum HOM05D000068 ORTHO05D004505 1.0e-33 147.5 172 55.2
Zm00001eb214670 Zea mays HOM05D000068 ORTHO05D004505 1.0e-33 147.5 172 55.2
PSO478G0123 Papaver somniferum HOM05D000068 ORTHO05D004505 1.3e-33 147.1 172 54.7
Thecc.04G098200 Theobroma cacao HOM05D000068 ORTHO05D004505 1.3e-33 147.1 172 54.7
Cc00_g03450 Coffea canephora HOM05D000068 ORTHO05D004505 1.7e-33 146.7 172 54.7
Os03g0755100 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D004505 1.7e-33 146.7 172 53.5
Phvul.003G183200 Phaseolus vulgaris HOM05D000068 ORTHO05D004505 1.7e-33 146.7 171 53.2
Cc07_g04380 Coffea canephora HOM05D000068 ORTHO05D004505 2.3e-33 146.4 172 54.7
COL.COLO4_24317 Corchorus olitorius HOM05D000068 ORTHO05D004505 2.3e-33 146.4 172 52.3
Manes.02G057050 Manihot esculenta HOM05D000068 ORTHO05D004505 2.3e-33 146.4 167 55.1
AUR62021529 Chenopodium quinoa HOM05D000068 ORTHO05D004505 3.0e-33 146.0 172 53.5
Gohir.D07G071800 Gossypium hirsutum HOM05D000068 ORTHO05D004505 3.0e-33 146.0 172 54.1
Gorai.001G075900 Gossypium raimondii HOM05D000068 ORTHO05D004505 3.0e-33 146.0 172 54.1
Lalb_Chr13g0302771 Lupinus albus HOM05D000068 ORTHO05D004505 3.0e-33 146.0 171 54.4
Solyc03g114950.2 Solanum lycopersicum HOM05D000068 ORTHO05D004505 3.9e-33 145.6 172 51.7
Sopen03g034030 Solanum pennellii HOM05D000068 ORTHO05D004505 3.9e-33 145.6 172 51.7
PGSC0003DMG400024532 Solanum tuberosum HOM05D000068 ORTHO05D004505 3.9e-33 145.6 172 51.7
CAN.G1228.8 Capsicum annuum HOM05D000068 ORTHO05D004505 5.1e-33 145.2 172 51.7
COL.COLO4_02774 Corchorus olitorius HOM05D000068 ORTHO05D004505 6.6e-33 144.8 172 51.2
Sabra15G0085000 Salix brachista HOM05D000068 ORTHO05D004505 8.6e-33 144.4 167 53.3
TWI34G0290 Tripterygium wilfordii HOM05D000068 ORTHO05D004505 8.6e-33 144.4 172 53.5
THA.LOC104822820 Tarenaya hassleriana HOM05D000068 ORTHO05D004505 1.1e-32 144.1 172 51.7
Gohir.A05G381000 Gossypium hirsutum HOM05D000068 ORTHO05D004505 1.5e-32 143.7 172 51.7
Gorai.012G038700 Gossypium raimondii HOM05D000068 ORTHO05D004505 1.5e-32 143.7 172 51.7
Ca_21761_v3 Cicer arietinum L. HOM05D000068 ORTHO05D004505 1.9e-32 143.3 171 53.8
Psat4g046360 Pisum sativum HOM05D000068 ORTHO05D004505 4.3e-32 142.1 171 53.2
arahy.Tifrunner.gnm1.ann1.6K2AQG Arachis hypogaea HOM05D000068 ORTHO05D004505 5.6e-32 141.7 171 53.2
arahy.Tifrunner.gnm1.ann1.ZGC9F0 Arachis hypogaea HOM05D000068 ORTHO05D004505 5.6e-32 141.7 171 53.2
Glyma.17G080400 Glycine max HOM05D000068 ORTHO05D004505 5.6e-32 141.7 171 52.0
Hma1.2p1_0322F.1_g124590 Hydrangea macrophylla HOM05D000068 ORTHO05D004505 5.6e-32 141.7 172 51.7
Actinidia17594 Actinidia chinensis HOM05D000068 ORTHO05D004505 7.3e-32 141.4 168 52.4
Actinidia35044 Actinidia chinensis HOM05D000068 ORTHO05D004505 7.3e-32 141.4 172 52.3
MSTRG.11332 Avicennia marina HOM05D000068 ORTHO05D004505 7.3e-32 141.4 172 54.1
CAN.G1194.5 Capsicum annuum HOM05D000068 ORTHO05D004505 7.3e-32 141.4 173 52.0
Eucgr.I02042 Eucalyptus grandis HOM05D000068 ORTHO05D004505 7.3e-32 141.4 172 50.0
VMungo1215G0543 Vigna mungo HOM05D000068 ORTHO05D004505 7.3e-32 141.4 171 52.0
CARHR263390 Cardamine hirsuta HOM05D000068 ORTHO05D004505 9.5e-32 141.0 172 50.0
ClCG04G011670 Citrullus lanatus HOM05D000068 ORTHO05D004505 9.5e-32 141.0 172 54.1
Glyma.05G019400 Glycine max HOM05D000068 ORTHO05D004505 9.5e-32 141.0 171 51.5
Gohir.D04G034400 Gossypium hirsutum HOM05D000068 ORTHO05D004505 9.5e-32 141.0 172 51.2
Medtr4g109720 Medicago truncatula HOM05D000068 ORTHO05D004505 9.5e-32 141.0 171 52.0
Potri.015G059800 Populus trichocarpa HOM05D000068 ORTHO05D004505 9.5e-32 141.0 172 52.9
SalBow5G3913 Salvia bowleyana HOM05D000068 ORTHO05D004505 1.2e-31 140.6 172 51.2
Actinidia18979 Actinidia chinensis HOM05D000068 ORTHO05D004505 1.6e-31 140.2 172 52.9
BcaB06g27263 Brassica carinata HOM05D000068 ORTHO05D004505 1.6e-31 140.2 172 51.2
BcaC02g09680 Brassica carinata HOM05D000068 ORTHO05D004505 1.6e-31 140.2 172 51.2
C04p45520 Brassica napus HOM05D000068 ORTHO05D004505 1.6e-31 140.2 172 51.2
BolC4t26136H Brassica oleracea HOM05D000068 ORTHO05D004505 1.6e-31 140.2 172 51.2
CSS0014152 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004505 1.6e-31 140.2 178 50.6
Nitab4.5_0001485g0050 Nicotiana tabacum HOM05D000068 ORTHO05D004505 1.6e-31 140.2 159 53.5
Potri.018G051800 Populus trichocarpa HOM05D000068 ORTHO05D004505 1.6e-31 140.2 173 50.9
Sabra18G0048100 Salix brachista HOM05D000068 ORTHO05D004505 1.6e-31 140.2 172 52.3
CsaV3_1G006130 Cucumis sativus L. HOM05D000068 ORTHO05D004505 2.1e-31 139.8 172 53.5
Lj4g0022546 Lotus japonicus HOM05D000068 ORTHO05D004505 2.8e-31 139.4 171 53.2
AL7G51410 Arabidopsis lyrata HOM05D000068 ORTHO05D004505 3.6e-31 139.0 172 50.0
TPR.G1996 Trifolium pratense HOM05D000068 ORTHO05D004505 3.6e-31 139.0 171 49.7
AT5G39040 Arabidopsis thaliana HOM05D000068 ORTHO05D004505 4.7e-31 138.7 172 50.0
A04p11850 Brassica napus HOM05D000068 ORTHO05D004505 4.7e-31 138.7 172 50.6
BraA04t16851Z Brassica rapa HOM05D000068 ORTHO05D004505 4.7e-31 138.7 172 50.6
ATR0827G053 Amborella trichopoda HOM05D000068 ORTHO05D004505 6.2e-31 138.3 172 50.0
ECA232G3845 Erigeron canadensis HOM05D000068 ORTHO05D004505 6.2e-31 138.3 172 52.3
Lsat_1_v5_gn_4_172260 Lactuca sativa HOM05D000068 ORTHO05D004505 6.2e-31 138.3 172 52.9
Nitab4.5_0007160g0040 Nicotiana tabacum HOM05D000068 ORTHO05D004505 8.1e-31 137.9 161 52.8
EL10Ac5g11160 Beta vulgaris HOM05D000068 ORTHO05D004505 1.1e-30 137.5 172 50.6
Carub.0007s3682 Capsella rubella HOM05D000068 ORTHO05D004505 1.1e-30 137.5 172 49.4
Aa31LG9G16750 Aethionema arabicum HOM05D000068 ORTHO05D004505 1.4e-30 137.1 172 49.4
MELO3C002042.2 Cucumis melo HOM05D000068 ORTHO05D004505 1.4e-30 137.1 172 52.9
HanXRQChr15g0489081 Helianthus annuus HOM05D000068 ORTHO05D004505 1.4e-30 137.1 172 52.3
HPP92_019346 Vanilla planifolia HOM05D000068 ORTHO05D004505 1.4e-30 137.1 172 52.9
Thhalv10027684m.g Eutrema salsugineum HOM05D000068 ORTHO05D004505 1.8e-30 136.7 172 48.8
ECA233G1111 Erigeron canadensis HOM05D000068 ORTHO05D004505 2.4e-30 136.3 172 49.4
Sp7g02870 Schrenkiella parvula HOM05D000068 ORTHO05D004505 2.4e-30 136.3 172 49.4
Sed0027691 Sechium edule HOM05D000068 ORTHO05D004505 2.4e-30 136.3 172 52.3
Potri.015G059600 Populus trichocarpa HOM05D000068 ORTHO05D004505 3.1e-30 136.0 172 51.2
unitig_748.g8419 Utricularia gibba HOM05D000068 ORTHO05D004505 3.1e-30 136.0 140 59.3
HanXRQChr08g0212891 Helianthus annuus HOM05D000068 ORTHO05D004505 5.2e-30 135.2 172 50.6
Aqoxy3G00519 Aquilegia oxysepala HOM05D000068 ORTHO05D004505 6.8e-30 134.8 172 50.6
Lsat_1_v5_gn_8_42700 Lactuca sativa HOM05D000068 ORTHO05D004505 6.8e-30 134.8 172 50.6
SGA_v2.0_scaffold733G53532 Striga asiatica HOM05D000068 ORTHO05D004505 6.8e-30 134.8 172 50.0
Atru.chr9.515 Acer truncatum HOM05D000068 ORTHO05D004505 1.5e-29 133.7 172 51.7
Psat4g046400 Pisum sativum HOM05D000068 ORTHO05D004505 1.5e-29 133.7 170 48.8
Potri.015G059700 Populus trichocarpa HOM05D000068 ORTHO05D004505 2.0e-29 133.3 172 51.2
GSVIVG01032898001 Vitis vinifera HOM05D000068 ORTHO05D004505 2.0e-29 133.3 172 47.7
CSS0027570 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004505 5.8e-29 131.7 169 47.9
Migut.K01263 Erythranthe guttata HOM05D000068 ORTHO05D004505 5.8e-29 131.7 174 50.6
DCAR_023160 Daucus carota HOM05D000068 ORTHO05D004505 9.9e-29 131.0 172 48.3
Gohir.A11G061400 Gossypium hirsutum HOM05D000068 ORTHO05D004505 3.8e-28 129.0 172 45.3
Gohir.D11G065300 Gossypium hirsutum HOM05D000068 ORTHO05D004505 8.4e-28 127.9 172 44.2
Duzib147G0173 Durio zibethinus HOM05D000068 ORTHO05D004505 1.1e-27 127.5 172 46.5
Gorai.007G070500 Gossypium raimondii HOM05D000068 ORTHO05D004505 1.9e-27 126.7 172 44.8
Duzib187G1839 Durio zibethinus HOM05D000068 ORTHO05D004505 2.1e-26 123.2 166 46.4
Thecc.04G098000 Theobroma cacao HOM05D000068 ORTHO05D004505 2.1e-26 123.2 167 47.3
unitig_32.g10756 Utricularia gibba HOM05D000068 ORTHO05D004505 2.7e-26 122.9 183 47.0
Peaxi162Scf00555g00915 Petunia axillaris HOM05D000068 ORTHO05D004505 6.0e-26 121.7 132 54.5
DCAR_011561 Daucus carota HOM05D000068 ORTHO05D004505 3.9e-25 119.0 203 43.8
Mapoly0075s0079 Marchantia polymorpha HOM05D000068 ORTHO05D004505 1.9e-24 116.7 172 44.8
Hund02568 Selenicereus undatus HOM05D000068 ORTHO05D004505 4.7e-23 112.1 172 46.5
SMO134G0255 Selaginella moellendorffii HOM05D000068 ORTHO05D004505 9.0e-22 107.8 172 43.0
AagrBONN_evm.TU.Sc2ySwM_117.1927 Anthoceros agrestis HOM05D000068 ORTHO05D004505 2.0e-21 106.7 175 42.9
Pp3c2_36840 Physcomitrium patens HOM05D000068 ORTHO05D004505 2.6e-21 106.3 172 45.3
SEGI_37488 Sequoiadendron giganteum HOM05D000068 ORTHO05D004505 8.4e-20 101.3 75 68.0
Medtr8g032090 Medicago truncatula HOM05D000504 ORTHO05D004505 1.4e-19 100.5 116 48.3
Nitab4.5_0001580g0130 Nicotiana tabacum HOM05D000068 ORTHO05D004505 4.6e-18 95.5 150 43.3
AUR62039654 Chenopodium quinoa HOM05D000068 ORTHO05D004505 1.7e-17 93.6 157 41.4
QL10p019992 Quercus lobata HOM05D000068 ORTHO05D004505 5.6e-16 88.6 198 36.9
CBR_g23255 Chara braunii HOM05D000068 ORTHO05D004505 1.2e-13 80.9 172 33.1
TAR376G0874 Trochodendron aralioides HOM05D000159 ORTHO05D016998 1.8e-09 67.0 40 90.0
Dinv17437 Davidia involucrata HOM05D000068 ORTHO05D004505 1.1e-08 64.3 40 85.0
Nitab4.5_0004846g0010 Nicotiana tabacum HOM05D000068 ORTHO05D004505 1.9e-08 63.5 51 54.9
TAR365G0177 Trochodendron aralioides HOM05D000159 ORTHO05D016998 3.3e-08 62.8 40 87.5
SEGI_02713 Sequoiadendron giganteum HOM05D009513 ORTHO05D004505 4.8e-07 58.9 40 72.5
CDE09G0210 Ceratophyllum demersum HOM05D000068 ORTHO05D004505 4.0e-06 55.8 51 58.8


User provided reference genes

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