Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0116 Trochodendron aralioides HOM05D042336 ORTHO05D003876 4.9e-32 140.6 74 100.0
FAN05G3232 Fragaria x ananassa HOM05D001810 ORTHO05D003876 2.9e-08 61.6 36 86.1
FAN02G1520 Fragaria x ananassa HOM05D001810 ORTHO05D003876 4.9e-08 60.8 33 93.9
FAN09G1684 Fragaria x ananassa HOM05D001810 ORTHO05D003876 4.9e-08 60.8 33 93.9
TAR371G0848 Trochodendron aralioides HOM05D042336 ORTHO05D414721 6.5e-08 60.5 69 47.8
FvH4_6g37010 Fragaria vesca HOM05D001810 ORTHO05D003876 1.9e-07 58.9 32 93.8
Actinidia21885 Actinidia chinensis HOM05D001810 ORTHO05D003876 3.2e-07 58.2 36 80.6
RcHm_v2.0_Chr2g0149551 Rosa chinensis HOM05D001810 ORTHO05D003876 4.2e-07 57.8 32 90.6
COL.COLO4_31159 Corchorus olitorius HOM05D001810 ORTHO05D003876 7.1e-07 57.0 32 90.6
Rhsim03G0090500 Rhododendron simsii HOM05D001810 ORTHO05D003876 7.1e-07 57.0 32 87.5
Rhsim12G0215300 Rhododendron simsii HOM05D001810 ORTHO05D003876 7.1e-07 57.0 32 87.5
PGSC0003DMG400004633 Solanum tuberosum HOM05D001810 ORTHO05D003876 7.1e-07 57.0 31 93.5
Thecc.06G057700 Theobroma cacao HOM05D001810 ORTHO05D003876 7.1e-07 57.0 32 87.5
vmacro17966 Vaccinium macrocarpon HOM05D001810 ORTHO05D003876 7.1e-07 57.0 32 87.5
Atru.chr1.2655 Acer truncatum HOM05D001810 ORTHO05D005662 9.3e-07 56.6 34 79.4
FAN14G2000 Fragaria x ananassa HOM05D001810 ORTHO05D003876 9.3e-07 56.6 30 96.7
Nn8g40872 Nelumbo nucifera HOM05D001810 ORTHO05D003876 9.3e-07 56.6 35 80.0
Gohir.A05G114700 Gossypium hirsutum HOM05D001810 ORTHO05D003876 1.2e-06 56.2 32 87.5
Gohir.D05G115100 Gossypium hirsutum HOM05D001810 ORTHO05D003876 1.2e-06 56.2 32 87.5
Lalb_Chr01g0011711 Lupinus albus HOM05D001810 ORTHO05D003876 1.2e-06 56.2 31 90.3
Actinidia21653 Actinidia chinensis HOM05D001810 ORTHO05D003876 1.6e-06 55.8 32 84.4
CAN.G484.40 Capsicum annuum HOM05D001810 ORTHO05D003876 1.6e-06 55.8 33 84.8
Solyc12g099490.3 Solanum lycopersicum HOM05D001810 ORTHO05D003876 1.6e-06 55.8 31 90.3
TAR626G1359 Trochodendron aralioides HOM05D001810 ORTHO05D003876 1.6e-06 55.8 32 87.5
AL1G28980 Arabidopsis lyrata HOM05D001810 ORTHO05D003876 2.1e-06 55.5 32 81.2
AT1G16810 Arabidopsis thaliana HOM05D001810 ORTHO05D003876 2.1e-06 55.5 32 81.2
Hma1.2p1_0517F.1_g170810 Hydrangea macrophylla HOM05D001810 ORTHO05D003876 2.1e-06 55.5 31 90.3
Hma1.2p1_3612F.1_g337040 Hydrangea macrophylla HOM05D001810 ORTHO05D003876 2.1e-06 55.5 31 90.3
Nitab4.5_0000570g0230 Nicotiana tabacum HOM05D001810 ORTHO05D003876 2.1e-06 55.5 30 93.3
Nitab4.5_0003466g0020 Nicotiana tabacum HOM05D001810 ORTHO05D003876 2.1e-06 55.5 30 93.3
Sopen12g034160 Solanum pennellii HOM05D001810 ORTHO05D003876 2.1e-06 55.5 30 93.3
TWI18G1195 Tripterygium wilfordii HOM05D001810 ORTHO05D005662 2.1e-06 55.5 33 81.8
CSS0035377 Camellia sinensis var. sinensis HOM05D001810 ORTHO05D003876 2.7e-06 55.1 31 87.1
Ciclev10033044m.g Citrus clementina HOM05D001810 ORTHO05D003876 2.7e-06 55.1 32 84.4
Migut.I01198 Erythranthe guttata HOM05D001810 ORTHO05D003876 2.7e-06 55.1 31 90.3
Peaxi162Scf00045g01524 Petunia axillaris HOM05D001810 ORTHO05D003876 2.7e-06 55.1 33 81.8
Cfa002155 Carpinus fangiana HOM05D001810 ORTHO05D003876 3.5e-06 54.7 31 87.1
CiPaw.01G091100 Carya illinoinensis HOM05D001810 ORTHO05D003876 3.5e-06 54.7 31 87.1
Haze_16256 Corylus avellana HOM05D001810 ORTHO05D003876 3.5e-06 54.7 31 87.1
Prupe.3G022600 Prunus persica HOM05D001810 ORTHO05D003876 3.5e-06 54.7 32 84.4
QL03p005885 Quercus lobata HOM05D001810 ORTHO05D003876 3.5e-06 54.7 31 87.1
QL03p006486 Quercus lobata HOM05D001810 ORTHO05D003876 3.5e-06 54.7 31 87.1
Duzib235G1221 Durio zibethinus HOM05D001810 ORTHO05D005662 4.6e-06 54.3 42 69.0
QL05p084549 Quercus lobata HOM05D001810 ORTHO05D003876 4.6e-06 54.3 31 87.1
QL05p084923 Quercus lobata HOM05D001810 ORTHO05D003876 4.6e-06 54.3 31 87.1
GSVIVG01029544001 Vitis vinifera HOM05D001810 ORTHO05D003876 4.6e-06 54.3 32 78.1
DCAR_014051 Daucus carota HOM05D001810 ORTHO05D003876 6.0e-06 53.9 31 83.9
Sed0017404 Sechium edule HOM05D001810 ORTHO05D003876 7.9e-06 53.5 31 83.9
SEGI_29786 Sequoiadendron giganteum HOM05D001810 ORTHO05D003876 7.9e-06 53.5 34 79.4
Sc15g0001110 Simmondsia chinensis HOM05D001810 ORTHO05D003876 7.9e-06 53.5 32 81.2


User provided reference genes

Program Settings