Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 6.4e-227 790.4 401 100.0
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.4e-85 320.1 288 64.6
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.8e-59 234.2 282 49.3
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.5e-58 231.1 286 47.9
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 3.3e-58 229.9 283 48.1
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 2.8e-57 226.9 287 50.2
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 5.9e-55 219.2 283 48.4
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.3e-54 218.0 274 48.2
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.7e-54 217.6 284 46.5
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 2.9e-54 216.9 282 48.6
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 5.0e-54 216.1 283 51.6
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 1.9e-53 214.2 283 47.3
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 4.2e-53 213.0 284 44.0
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 7.2e-53 212.2 287 47.0
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 9.4e-53 211.8 286 46.5
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 4.7e-52 209.5 288 48.3
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 4.7e-52 209.5 283 49.8
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 7.9e-52 208.8 274 46.4
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.0e-51 208.4 266 47.0
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.3e-51 207.2 282 46.8
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 2.3e-51 207.2 287 45.3
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.9e-51 206.5 271 45.8
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 3.9e-51 206.5 284 45.8
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 6.7e-51 205.7 286 44.8
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 6.7e-51 205.7 286 45.1
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 8.8e-51 205.3 283 44.5
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.1e-50 204.9 283 44.9
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 3.3e-50 203.4 291 44.3
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.3e-49 201.4 288 43.4
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.7e-49 201.1 283 44.2
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 2.8e-49 200.3 275 47.6
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.8e-48 197.6 283 42.8
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.8e-48 197.6 340 40.6
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 3.1e-48 196.8 276 45.7
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 2.0e-47 194.1 278 46.0
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 2.6e-47 193.7 286 43.0
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 2.6e-47 193.7 292 43.2
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.7e-46 191.0 280 44.3
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.7e-46 191.0 287 42.9
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.5e-45 187.2 286 40.6
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.5e-45 186.0 284 41.9
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.2e-44 184.9 331 39.3
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 1.6e-44 184.5 286 40.6
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 8.0e-44 182.2 244 44.7
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 3.0e-43 180.3 259 45.2
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 4.0e-43 179.9 276 42.0
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 6.7e-43 179.1 282 42.6
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 6.7e-43 179.1 280 42.5
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 8.8e-43 178.7 281 43.1
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.2e-42 178.3 199 50.8
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.6e-42 177.2 259 45.2
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 7.5e-42 175.6 267 42.7
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 7.5e-42 175.6 267 42.7
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 9.7e-42 175.3 281 40.9
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 4.8e-41 172.9 262 46.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 6.3e-41 172.6 273 41.8
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 1.1e-40 171.8 259 44.4
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.1e-40 171.8 244 41.8
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 1.1e-40 171.8 285 41.4
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 1.8e-40 171.0 270 41.9
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 1.8e-40 171.0 271 41.0
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 3.1e-40 170.2 268 44.8
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 4.1e-40 169.9 268 42.5
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 5.3e-40 169.5 268 42.5
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 5.3e-40 169.5 264 45.1
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 7.0e-40 169.1 262 41.6
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 9.1e-40 168.7 264 44.7
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.7e-39 165.6 273 37.0
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 7.7e-39 165.6 158 55.1
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.0e-38 165.2 269 43.1
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.0e-38 165.2 277 39.0
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 2.9e-38 163.7 275 39.3
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.9e-38 163.7 273 36.6
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 2.9e-38 163.7 292 38.7
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 3.8e-38 163.3 269 41.6
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 6.5e-38 162.5 265 42.6
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.5e-37 161.4 122 67.2
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 3.2e-37 160.2 191 50.3
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 3.2e-37 160.2 285 40.4
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 9.4e-37 158.7 232 44.8
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.2e-36 158.3 260 41.2
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 2.1e-36 157.5 283 38.9
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 2.7e-36 157.1 289 41.2
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 4.7e-36 156.4 259 42.1
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 4.7e-36 156.4 280 38.6
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 1.4e-35 154.8 280 39.3
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 1.8e-35 154.5 291 36.4
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 3.0e-35 153.7 190 45.8
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 3.0e-35 153.7 190 45.8
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 4.0e-35 153.3 278 37.8
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 5.2e-35 152.9 190 45.3
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 8.8e-35 152.1 270 42.2
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 5.7e-34 149.4 385 31.4
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.3e-33 148.3 120 60.0
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 2.2e-33 147.5 207 44.0
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 4.8e-33 146.4 288 35.1
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 6.3e-33 146.0 290 39.0
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 2.4e-32 144.1 254 41.7
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 3.1e-32 143.7 220 44.5
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 9.1e-32 142.1 294 34.7
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 1.2e-31 141.7 266 38.7
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.3e-30 138.3 285 35.8
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 2.9e-30 137.1 282 38.7
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 2.9e-30 137.1 350 31.7
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.5e-29 134.0 122 53.3
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 7.2e-29 132.5 244 39.3
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 9.5e-29 132.1 296 33.4
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 4.7e-28 129.8 272 38.2
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 4.0e-27 126.7 231 39.8
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.0e-26 124.4 139 48.9
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 3.4e-26 123.6 276 34.1
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 9.8e-26 122.1 175 47.4
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 9.8e-26 122.1 175 47.4
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 9.8e-26 122.1 175 47.4
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 9.8e-26 122.1 175 47.4
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 9.8e-26 122.1 175 47.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 1.7e-25 121.3 288 33.3
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 3.1e-24 117.1 258 36.0
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 9.2e-24 115.5 207 39.6
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 3.5e-23 113.6 292 31.8
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.0e-22 112.1 134 43.3
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 1.7e-22 111.3 177 40.7
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 1.7e-22 111.3 117 47.9
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 1.5e-18 98.2 147 43.5
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.8e-11 74.7 66 53.0
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.9e-09 67.4 69 55.1
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 6.4e-09 66.2 317 22.7
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 1.9e-08 64.7 42 76.2
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.7e-06 58.2 99 34.3


User provided reference genes

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