Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.4e-173 612.8 318 100.0
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 5.0e-134 481.5 324 78.4
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.5e-133 479.2 326 77.9
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.5e-133 479.2 320 79.7
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 5.6e-133 478.0 319 80.6
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 9.5e-133 477.2 322 78.9
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.8e-131 473.0 313 79.9
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 2.3e-131 472.6 324 76.2
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.4e-128 463.4 325 75.1
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 5.4e-128 461.5 323 75.5
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 7.0e-128 461.1 329 76.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.3e-126 456.1 329 76.3
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 6.6e-126 454.5 324 75.0
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.9e-125 453.0 323 74.3
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 5.6e-125 451.4 316 75.9
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 5.6e-125 451.4 327 73.1
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 5.6e-125 451.4 327 76.5
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 4.7e-124 448.4 329 75.1
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 4.7e-124 448.4 318 76.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 4.0e-123 445.3 323 75.9
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 4.0e-123 445.3 325 73.5
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 4.0e-123 445.3 321 72.9
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.5e-122 443.4 325 72.9
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.4e-122 441.8 325 72.9
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.7e-121 439.9 321 72.0
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 8.3e-121 437.6 315 74.3
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.4e-120 436.8 319 72.4
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 5.4e-120 434.9 325 73.2
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.2e-119 433.7 338 70.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.6e-119 433.3 326 71.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 3.5e-119 432.2 326 69.0
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 6.0e-119 431.4 323 72.4
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 7.8e-119 431.0 325 72.6
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 7.8e-119 431.0 322 72.7
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.0e-118 430.6 319 71.8
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.3e-118 430.3 323 69.3
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.3e-118 430.3 328 72.0
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.1e-118 428.3 323 72.8
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.5e-117 426.8 321 72.9
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 5.6e-117 424.9 318 72.0
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.2e-116 423.7 259 84.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.2e-116 423.7 322 72.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 4.7e-116 421.8 323 70.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.4e-115 420.2 318 69.8
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.8e-115 419.9 320 71.2
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.8e-115 419.9 325 70.2
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.8e-115 419.9 324 70.1
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 4.0e-115 418.7 320 69.4
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.2e-115 418.3 322 70.2
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 5.2e-115 418.3 319 70.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.2e-114 417.2 236 92.4
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.5e-114 416.8 321 68.8
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.5e-114 416.8 320 70.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.5e-114 416.8 249 86.7
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 2.0e-114 416.4 321 69.5
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.4e-114 415.6 320 69.7
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 3.4e-114 415.6 315 73.3
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 9.9e-114 414.1 321 70.4
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.9e-113 412.5 323 69.0
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 2.9e-113 412.5 277 77.6
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 4.9e-113 411.8 320 69.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 6.4e-113 411.4 320 70.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.1e-112 410.6 342 65.5
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.1e-112 410.6 300 73.0
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.9e-112 409.8 321 68.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 5.4e-112 408.3 322 68.0
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 9.2e-112 407.5 260 80.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.2e-111 407.1 286 74.1
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.2e-111 407.1 325 68.3
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.1e-110 401.7 307 70.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 5.1e-110 401.7 315 69.5
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 6.6e-110 401.4 365 62.5
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 8.7e-110 401.0 250 83.2
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.1e-109 400.6 263 77.6
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.5e-109 400.2 294 71.8
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.3e-109 399.1 317 67.2
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 4.7e-108 395.2 263 76.4
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.1e-107 394.0 348 63.8
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.8e-107 393.3 330 68.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 9.0e-107 391.0 335 65.4
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 9.0e-107 391.0 320 65.6
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 5.8e-106 388.3 329 65.3
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.4e-104 381.7 322 65.8
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 9.3e-104 380.9 320 65.6
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.7e-103 379.4 238 81.1
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 2.5e-101 372.9 331 63.4
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.5e-101 372.9 316 62.0
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 4.0e-99 365.5 325 60.9
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.9e-98 360.9 250 74.8
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.9e-96 356.7 234 77.4
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.3e-93 345.5 325 60.6
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.6e-92 343.6 220 79.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.8e-91 340.1 218 81.2
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 4.0e-91 339.0 235 72.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 2.0e-90 336.7 254 74.0
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 4.3e-85 318.9 216 70.4
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 5.8e-82 308.5 258 66.3
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 5.5e-80 302.0 244 64.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.9e-77 293.5 260 56.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.9e-77 293.5 239 66.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.4e-77 291.6 213 74.6
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.9e-73 279.6 260 54.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 2.7e-71 273.1 277 51.3
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.9e-64 250.4 251 52.2
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.6e-63 247.3 278 49.3
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.7e-61 238.8 272 46.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.7e-60 237.3 249 52.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.0e-57 225.7 253 48.6
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-53 214.5 129 84.5
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 9.7e-53 211.5 264 43.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.2e-47 194.5 250 46.0
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 9.7e-45 184.9 165 65.5
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 3.5e-42 176.4 123 77.2
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.2e-41 173.7 246 38.2
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.7e-28 131.0 313 36.4
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.5e-24 117.9 244 31.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 2.3e-17 94.0 276 29.0
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 5.1e-09 66.2 76 51.3
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 2.5e-08 63.9 143 37.1
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.6e-07 61.2 32 96.9
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 2.8e-07 60.5 52 59.6


User provided reference genes

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