Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0012 Trochodendron aralioides HOM05D006247 ORTHO05D007684 7.5e-80 300.4 149 100.0
TAR383G1025 Trochodendron aralioides HOM05D006247 ORTHO05D007684 6.8e-73 277.3 143 95.8
Nn2g12713 Nelumbo nucifera HOM05D006247 ORTHO05D007684 1.4e-54 216.5 142 71.1
MBI14_g17363_MAGBIO Magnolia biondii HOM05D006247 ORTHO05D007684 4.0e-49 198.4 143 67.1
PSO170G0820 Papaver somniferum HOM05D006247 ORTHO05D007684 4.4e-48 194.9 143 64.3
PSO017G3786 Papaver somniferum HOM05D006247 ORTHO05D007684 1.3e-47 193.4 143 64.3
GSVIVG01029207001 Vitis vinifera HOM05D006247 ORTHO05D007684 1.1e-46 190.3 146 66.4
Dinv42726 Davidia involucrata HOM05D006247 ORTHO05D007684 2.4e-46 189.1 141 68.8
Dinv43375 Davidia involucrata HOM05D006247 ORTHO05D007684 2.4e-46 189.1 141 68.8
Aqoxy7G02323 Aquilegia oxysepala HOM05D006247 ORTHO05D007684 7.0e-46 187.6 143 63.6
CSS0031352 Camellia sinensis var. sinensis HOM05D006247 ORTHO05D007684 1.6e-45 186.4 141 68.1
CiPaw.07G192000 Carya illinoinensis HOM05D006247 ORTHO05D007684 2.0e-45 186.0 144 66.0
Actinidia04160 Actinidia chinensis HOM05D006247 ORTHO05D007684 1.0e-44 183.7 141 66.0
QL02p097643 Quercus lobata HOM05D006247 ORTHO05D007684 1.0e-44 183.7 144 62.5
Manes.14G152800 Manihot esculenta HOM05D006247 ORTHO05D007684 8.6e-44 180.6 144 61.1
COL.COLO4_07069 Corchorus olitorius HOM05D006247 ORTHO05D007684 1.1e-43 180.3 142 59.9
Potri.006G168900 Populus trichocarpa HOM05D006247 ORTHO05D007684 1.5e-43 179.9 141 63.8
Oeu025222.1 Olea europaea HOM05D006247 ORTHO05D007684 3.3e-43 178.7 144 61.1
Rhsim01G0005000 Rhododendron simsii HOM05D006247 ORTHO05D007684 4.3e-43 178.3 141 64.5
vmacro13121 Vaccinium macrocarpon HOM05D006247 ORTHO05D007684 4.3e-43 178.3 143 62.9
Rhsim01G0005100 Rhododendron simsii HOM05D006247 ORTHO05D007684 5.6e-43 177.9 141 63.8
Cc06_g13290 Coffea canephora HOM05D006247 ORTHO05D007684 7.3e-43 177.6 142 59.9
FAN22G0611 Fragaria x ananassa HOM05D006247 ORTHO05D007684 2.1e-42 176.0 140 61.4
Duzib168G0886 Durio zibethinus HOM05D006247 ORTHO05D007684 4.7e-42 174.9 144 59.7
Lj9A685T58 Lonicera japonica HOM05D006247 ORTHO05D007684 1.1e-41 173.7 138 62.3
Sabra06G0130300 Salix brachista HOM05D006247 ORTHO05D007684 1.8e-41 172.9 141 61.0
TWI34G1331 Tripterygium wilfordii HOM05D006247 ORTHO05D007684 1.8e-41 172.9 144 57.6
arahy.Tifrunner.gnm1.ann1.B1Q0FL Arachis hypogaea HOM05D006247 ORTHO05D007684 2.3e-41 172.6 141 61.0
Thecc.09G172600 Theobroma cacao HOM05D006247 ORTHO05D007684 2.3e-41 172.6 142 58.5
FvH4_4g08310 Fragaria vesca HOM05D006247 ORTHO05D007684 3.1e-41 172.2 140 61.4
FAN12G4057 Fragaria x ananassa HOM05D006247 ORTHO05D007684 3.1e-41 172.2 140 61.4
AUR62033213 Chenopodium quinoa HOM05D006247 ORTHO05D007684 5.2e-41 171.4 141 59.6
Ca_21220_v3 Cicer arietinum L. HOM05D006247 ORTHO05D007684 5.2e-41 171.4 141 60.3
Glyma.17G063800 Glycine max HOM05D006247 ORTHO05D007684 5.2e-41 171.4 141 61.0
Lj4g0017814 Lotus japonicus HOM05D006247 ORTHO05D007684 5.2e-41 171.4 141 58.9
RcHm_v2.0_Chr4g0402581 Rosa chinensis HOM05D006247 ORTHO05D007684 5.2e-41 171.4 141 60.3
Atru.chr7.645 Acer truncatum HOM05D006247 ORTHO05D007684 6.8e-41 171.0 140 61.4
Gorai.004G100200 Gossypium raimondii HOM05D006247 ORTHO05D007684 6.8e-41 171.0 142 58.5
Hund09028 Selenicereus undatus HOM05D006247 ORTHO05D007684 6.8e-41 171.0 140 60.0
MSTRG.10736 Avicennia marina HOM05D006247 ORTHO05D007684 8.9e-41 170.6 140 62.9
AUR62021296 Chenopodium quinoa HOM05D006247 ORTHO05D007684 8.9e-41 170.6 141 58.9
AUR62040315 Chenopodium quinoa HOM05D006247 ORTHO05D007684 8.9e-41 170.6 141 58.9
Gohir.A08G084700 Gossypium hirsutum HOM05D006247 ORTHO05D007684 1.2e-40 170.2 142 57.7
EL10Ac4g10218 Beta vulgaris HOM05D006247 ORTHO05D007684 2.0e-40 169.5 141 58.2
EL10Ac4g10223 Beta vulgaris HOM05D006247 ORTHO05D007684 2.0e-40 169.5 141 58.2
PGR102G2305 Punica granatum HOM05D006247 ORTHO05D007684 2.6e-40 169.1 141 58.9
Cpa.g.sc95.55 Carica papaya HOM05D006247 ORTHO05D007684 3.4e-40 168.7 144 59.0
VMungo1215G1070 Vigna mungo HOM05D006247 ORTHO05D007684 3.4e-40 168.7 142 57.7
Prupe.1G086300 Prunus persica HOM05D006247 ORTHO05D007684 4.4e-40 168.3 141 61.7
Gohir.D08G094300 Gossypium hirsutum HOM05D006247 ORTHO05D007684 5.8e-40 167.9 142 57.7
Phvul.003G146300 Phaseolus vulgaris HOM05D006247 ORTHO05D007684 7.5e-40 167.5 141 58.2
Ah.09g229830 Amaranthus hybridus HOM05D006247 ORTHO05D007684 2.2e-39 166.0 141 56.0
Lalb_Chr12g0199361 Lupinus albus HOM05D006247 ORTHO05D007684 2.9e-39 165.6 141 58.2
Sc18g0007480 Simmondsia chinensis HOM05D006247 ORTHO05D007684 2.9e-39 165.6 140 57.1
Eucgr.C02305 Eucalyptus grandis HOM05D006247 ORTHO05D007684 8.3e-39 164.1 143 56.6
TPR.G5375 Trifolium pratense HOM05D006247 ORTHO05D007684 8.3e-39 164.1 141 56.7
ClCG11G012190 Citrullus lanatus HOM05D006247 ORTHO05D007684 1.1e-38 163.7 140 58.6
MELO3C004030.2 Cucumis melo HOM05D006247 ORTHO05D007684 2.4e-38 162.5 140 56.4
Medtr4g128240 Medicago truncatula HOM05D006247 ORTHO05D007684 2.4e-38 162.5 141 56.0
CANSAT11G2703 Cannabis sativa HOM05D006247 ORTHO05D007684 3.2e-38 162.2 141 57.4
CDE05G3038 Ceratophyllum demersum HOM05D006247 ORTHO05D007684 4.1e-38 161.8 144 54.9
MD16G1258400 Malus domestica HOM05D006247 ORTHO05D007684 4.1e-38 161.8 141 58.9
Psat4g012560 Pisum sativum HOM05D006247 ORTHO05D007684 7.1e-38 161.0 141 55.3
ECA234G4502 Erigeron canadensis HOM05D006247 ORTHO05D007684 1.2e-37 160.2 143 55.9
HanXRQChr10g0308211 Helianthus annuus HOM05D006247 ORTHO05D007684 1.2e-37 160.2 143 53.8
Solyc02g014520.4 Solanum lycopersicum HOM05D006247 ORTHO05D007684 1.6e-37 159.8 141 54.6
Migut.K00244 Erythranthe guttata HOM05D006247 ORTHO05D007684 2.7e-37 159.1 140 58.6
ATR0580G346 Amborella trichopoda HOM05D006247 ORTHO05D007684 6.0e-37 157.9 142 52.8
Sed0001652 Sechium edule HOM05D006247 ORTHO05D007684 7.8e-37 157.5 140 56.4
EL10Ac8g18280 Beta vulgaris HOM05D006247 ORTHO05D007684 1.0e-36 157.1 141 54.6
Sopen02g003860 Solanum pennellii HOM05D006247 ORTHO05D007684 3.0e-36 155.6 141 53.2
CsaV3_2G008340 Cucumis sativus L. HOM05D006247 ORTHO05D007684 8.6e-36 154.1 140 53.6
Ciclev10007836m.g Citrus clementina HOM05D006247 ORTHO05D007684 3.3e-35 152.1 144 52.8
Os08g0244400 Oryza sativa ssp. japonica HOM05D006247 ORTHO05D007684 1.2e-34 150.2 143 53.1
SHI12522 Sapria himalayana HOM05D006247 ORTHO05D007684 1.2e-34 150.2 134 56.0
SGA_v2.0_scaffold12G06066 Striga asiatica HOM05D006247 ORTHO05D007684 1.2e-34 150.2 141 53.9
A07p01840 Brassica napus HOM05D006247 ORTHO05D007684 6.2e-34 147.9 138 54.3
THA.LOC104803499 Tarenaya hassleriana HOM05D006247 ORTHO05D007684 8.1e-34 147.5 143 49.7
SalBow1G0102 Salvia bowleyana HOM05D006247 ORTHO05D007684 1.4e-33 146.7 140 54.3
Thhalv10001950m.g Eutrema salsugineum HOM05D006247 ORTHO05D007684 1.8e-33 146.4 141 51.1
BolC7t40784H Brassica oleracea HOM05D006247 ORTHO05D007684 3.1e-33 145.6 138 53.6
C07p03920 Brassica napus HOM05D006247 ORTHO05D007684 4.0e-33 145.2 138 52.9
BcaC06g36474 Brassica carinata HOM05D006247 ORTHO05D007684 5.2e-33 144.8 138 52.9
Aa31LG8G15940 Aethionema arabicum HOM05D006247 ORTHO05D007684 6.8e-33 144.4 137 54.0
Lsat_1_v5_gn_5_84660 Lactuca sativa HOM05D006247 ORTHO05D007684 6.8e-33 144.4 143 53.8
BcaB03g16669 Brassica carinata HOM05D006247 ORTHO05D007684 8.9e-33 144.1 138 51.4
BraA07t27984Z Brassica rapa HOM05D006247 ORTHO05D007684 8.9e-33 144.1 138 52.9
AL3G53100 Arabidopsis lyrata HOM05D006247 ORTHO05D007684 2.0e-32 142.9 144 50.0
HPP92_015229 Vanilla planifolia HOM05D006247 ORTHO05D007684 3.4e-32 142.1 143 49.0
Sp3g32310 Schrenkiella parvula HOM05D006247 ORTHO05D007684 9.9e-32 140.6 144 49.3
AT2G18850 Arabidopsis thaliana HOM05D006247 ORTHO05D007684 3.8e-31 138.7 144 48.6
MD13G1255300 Malus domestica HOM05D006247 ORTHO05D007684 1.9e-30 136.3 138 54.3
Carub.0003s3308 Capsella rubella HOM05D006247 ORTHO05D007684 4.1e-30 135.2 141 48.9
Zm00001eb414720 Zea mays HOM05D006247 ORTHO05D007684 3.5e-29 132.1 142 46.5
DCAR_014704 Daucus carota HOM05D006247 ORTHO05D007684 1.3e-28 130.2 144 47.9
Glyma.13G096300 Glycine max HOM05D006247 ORTHO05D007684 1.6e-26 123.2 118 55.1
CARHR109410 Cardamine hirsuta HOM05D006247 ORTHO05D007684 1.4e-25 120.2 144 45.8
FAN07G1589 Fragaria x ananassa HOM05D006247 ORTHO05D007684 9.0e-25 117.5 140 48.6
FAN17G2058 Fragaria x ananassa HOM05D006247 ORTHO05D007684 1.5e-24 116.7 271 31.4
AagrBONN_evm.TU.Sc2ySwM_117.653 Anthoceros agrestis HOM05D006247 ORTHO05D007684 1.9e-22 109.8 105 48.6
Mapoly0146s0042 Marchantia polymorpha HOM05D006247 ORTHO05D007684 1.3e-18 97.1 105 43.8
Peaxi162Scf00113g01819 Petunia axillaris HOM05D006247 ORTHO05D007684 3.6e-18 95.5 94 54.3
CBR_g47154 Chara braunii HOM05D006247 ORTHO05D007684 9.3e-14 80.9 113 34.5
Nitab4.5_0004255g0020 Nicotiana tabacum HOM05D006247 ORTHO05D007684 9.3e-14 80.9 102 49.0
Nitab4.5_0000018g0090 Nicotiana tabacum HOM05D006247 ORTHO05D007684 7.9e-13 77.8 95 51.6
Hma1.2p1_3184F.1_g333730 Hydrangea macrophylla HOM05D006247 ORTHO05D007684 1.8e-09 66.6 55 61.8
CBR_g35035 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-07 57.8 66 37.9
SMO172G0104 Selaginella moellendorffii HOM05D006247 ORTHO05D007684 8.4e-07 57.8 62 45.2


User provided reference genes

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