Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0011 Trochodendron aralioides HOM05D000126 ORTHO05D000085 4.0e-38 161.0 85 100.0
TAR626G1494 Trochodendron aralioides HOM05D000126 ORTHO05D000085 2.2e-20 102.1 82 70.7
Potri.018G093600 Populus trichocarpa HOM05D000126 ORTHO05D000085 3.2e-19 98.2 82 64.6
Nn2g12704 Nelumbo nucifera HOM05D000126 ORTHO05D000085 6.0e-18 94.0 82 65.9
Sabra18G0080500 Salix brachista HOM05D000126 ORTHO05D000085 1.5e-16 89.4 82 61.0
Duzib168G0786 Durio zibethinus HOM05D000126 ORTHO05D000085 8.2e-15 83.6 82 61.0
Haze_22105 Corylus avellana HOM05D000126 ORTHO05D000085 3.1e-14 81.6 84 58.3
Duzib170G1021 Durio zibethinus HOM05D000126 ORTHO05D000085 3.1e-14 81.6 82 62.2
Cfa013512 Carpinus fangiana HOM05D000126 ORTHO05D000085 9.0e-14 80.1 88 55.7
Duzib150G1202 Durio zibethinus HOM05D000126 ORTHO05D000085 9.0e-14 80.1 81 60.5
Haze_22108 Corylus avellana HOM05D000126 ORTHO05D000085 2.0e-13 79.0 84 57.1
Hma1.2p1_1025F.1_g249240 Hydrangea macrophylla HOM05D000126 ORTHO05D000085 4.5e-13 77.8 90 61.1
Oeu042160.1 Olea europaea HOM05D000126 ORTHO05D000085 5.9e-13 77.4 83 59.0
Thecc.09G172300 Theobroma cacao HOM05D000126 ORTHO05D000085 7.7e-13 77.0 82 59.8
MSTRG.10735 Avicennia marina HOM05D000126 ORTHO05D000085 1.0e-12 76.6 78 61.5
SalBow6G3180 Salvia bowleyana HOM05D000126 ORTHO05D000085 1.0e-12 76.6 80 66.2
Aqoxy7G02320 Aquilegia oxysepala HOM05D000126 ORTHO05D000085 1.3e-12 76.3 89 55.1
Medtr4g128260 Medicago truncatula HOM05D000126 ORTHO05D000085 1.3e-12 76.3 89 56.2
MSTRG.6210 Avicennia marina HOM05D000126 ORTHO05D000085 1.7e-12 75.9 82 63.4
Oeu056515.1 Olea europaea HOM05D000126 ORTHO05D000085 1.7e-12 75.9 81 58.0
GSVIVG01029202001 Vitis vinifera HOM05D000126 ORTHO05D000085 2.9e-12 75.1 76 60.5
ClCG06G013300 Citrullus lanatus HOM05D000126 ORTHO05D000085 3.8e-12 74.7 82 52.4
Peaxi162Scf00113g00182 Petunia axillaris HOM05D000126 ORTHO05D000085 5.0e-12 74.3 82 62.2
QL02p097626 Quercus lobata HOM05D000126 ORTHO05D000085 5.0e-12 74.3 87 52.9
Potri.006G169000 Populus trichocarpa HOM05D000126 ORTHO05D000085 6.5e-12 73.9 86 51.2
Ca_21219_v3 Cicer arietinum L. HOM05D000126 ORTHO05D000085 1.1e-11 73.2 84 57.1
MBI16_g35929_MAGBIO Magnolia biondii HOM05D000126 ORTHO05D000085 1.4e-11 72.8 86 51.2
Migut.J01474 Erythranthe guttata HOM05D000126 ORTHO05D000085 1.9e-11 72.4 86 59.3
CiPaw.07G191900 Carya illinoinensis HOM05D000126 ORTHO05D000085 2.5e-11 72.0 84 54.8
CSS0045604 Camellia sinensis var. sinensis HOM05D000126 ORTHO05D000085 3.2e-11 71.6 81 60.5
CSS0013894 Camellia sinensis var. sinensis HOM05D000126 ORTHO05D000085 4.2e-11 71.2 85 61.2
CiPaw.08G036700 Carya illinoinensis HOM05D000126 ORTHO05D000085 5.5e-11 70.9 86 52.3
Gorai.004G100300 Gossypium raimondii HOM05D000126 ORTHO05D000085 7.2e-11 70.5 85 52.9
Lalb_Chr13g0300261 Lupinus albus HOM05D000126 ORTHO05D000085 7.2e-11 70.5 84 54.8
MSTRG.19703 Avicennia marina HOM05D000126 ORTHO05D000085 1.2e-10 69.7 83 56.6
CAN.G390.37 Capsicum annuum HOM05D000126 ORTHO05D000085 1.2e-10 69.7 85 56.5
Sed0007066 Sechium edule HOM05D000126 ORTHO05D000085 1.6e-10 69.3 86 52.3
CANSAT11G2063 Cannabis sativa HOM05D000126 ORTHO05D000085 2.1e-10 68.9 83 53.0
Cpa.g.sc95.56 Carica papaya HOM05D000126 ORTHO05D000085 2.1e-10 68.9 75 54.7
Ciclev10008017m.g Citrus clementina HOM05D000126 ORTHO05D000085 2.1e-10 68.9 84 52.4
Oeu002543.1 Olea europaea HOM05D000126 ORTHO05D000085 2.1e-10 68.9 91 50.5
Oeu004192.1 Olea europaea HOM05D000126 ORTHO05D000085 2.7e-10 68.6 71 56.3
PGSC0003DMG400041450 Solanum tuberosum HOM05D000126 ORTHO05D000085 2.7e-10 68.6 81 59.3
Gohir.D08G094400 Gossypium hirsutum HOM05D000126 ORTHO05D000085 3.6e-10 68.2 81 53.1
MSTRG.26223 Avicennia marina HOM05D000126 ORTHO05D000085 4.6e-10 67.8 78 57.7
Eucgr.C02293 Eucalyptus grandis HOM05D000126 ORTHO05D000085 6.1e-10 67.4 68 58.8
Manes.14G151800 Manihot esculenta HOM05D000126 ORTHO05D000085 7.9e-10 67.0 88 52.3
Gohir.A08G084900 Gossypium hirsutum HOM05D000126 ORTHO05D000085 1.0e-09 66.6 81 51.9
Gohir.A05G004400 Gossypium hirsutum HOM05D000126 ORTHO05D000085 1.4e-09 66.2 84 54.8
Gohir.D05G005200 Gossypium hirsutum HOM05D000126 ORTHO05D000085 1.4e-09 66.2 84 53.6
Gorai.009G005100 Gossypium raimondii HOM05D000126 ORTHO05D000085 1.4e-09 66.2 84 53.6
Prupe.1G086500 Prunus persica HOM05D000126 ORTHO05D000085 1.8e-09 65.9 87 51.7
Eucgr.C02294 Eucalyptus grandis HOM05D000126 ORTHO05D000085 3.0e-09 65.1 80 50.0
BcaC09g50740 Brassica carinata HOM05D000126 ORTHO05D000085 3.9e-09 64.7 66 63.6
C01p21420 Brassica napus HOM05D000126 ORTHO05D000085 3.9e-09 64.7 66 63.6
BolC1t02063H Brassica oleracea HOM05D000126 ORTHO05D000085 3.9e-09 64.7 66 63.6
Aa31LG3G13350 Aethionema arabicum HOM05D000126 ORTHO05D000085 5.1e-09 64.3 67 59.7
Nitab4.5_0000018g0150 Nicotiana tabacum HOM05D000126 ORTHO05D000085 5.1e-09 64.3 66 59.1
Oeu025221.1 Olea europaea HOM05D000126 ORTHO05D000085 5.1e-09 64.3 82 51.2
AT5G57480 Arabidopsis thaliana HOM05D000126 ORTHO05D000085 8.8e-09 63.5 67 58.2
Dinv41252 Davidia involucrata HOM05D000126 ORTHO05D000085 8.8e-09 63.5 72 58.3
Carub.0008s1798 Capsella rubella HOM05D000126 ORTHO05D000085 1.5e-08 62.8 64 59.4
CARHR271260 Cardamine hirsuta HOM05D000126 ORTHO05D000085 1.5e-08 62.8 65 58.5
Lalb_Chr07g0180441 Lupinus albus HOM05D000126 ORTHO05D000085 1.9e-08 62.4 84 53.6
HanXRQChr10g0308241 Helianthus annuus HOM05D000126 ORTHO05D000085 2.5e-08 62.0 81 51.9
Nitab4.5_0008248g0010 Nicotiana tabacum HOM05D000126 ORTHO05D000085 2.5e-08 62.0 65 56.9
TWI63G1174 Tripterygium wilfordii HOM05D000126 ORTHO05D000085 3.3e-08 61.6 83 50.6
AL8G33430 Arabidopsis lyrata HOM05D000126 ORTHO05D000085 4.3e-08 61.2 67 56.7
BcaB01g04456 Brassica carinata HOM05D000126 ORTHO05D000085 4.3e-08 61.2 75 56.0
A01p17110 Brassica napus HOM05D000126 ORTHO05D000085 4.3e-08 61.2 67 58.2
FAN17G1792 Fragaria x ananassa HOM05D000126 ORTHO05D000085 4.3e-08 61.2 86 48.8
Oeu009837.1 Olea europaea HOM05D000126 ORTHO05D000085 4.3e-08 61.2 76 52.6
BcaNung04104 Brassica carinata HOM05D000126 ORTHO05D000085 5.7e-08 60.8 70 55.7
Eucgr.C02297 Eucalyptus grandis HOM05D000126 ORTHO05D000085 5.7e-08 60.8 65 55.4
Eucgr.C02290 Eucalyptus grandis HOM05D000126 ORTHO05D000085 7.4e-08 60.5 90 52.2
FvH4_4g08330 Fragaria vesca HOM05D000126 ORTHO05D000085 9.7e-08 60.1 86 48.8
FAN12G1698 Fragaria x ananassa HOM05D000126 ORTHO05D000085 9.7e-08 60.1 86 48.8
Lsat_1_v5_gn_5_84581 Lactuca sativa HOM05D000126 ORTHO05D000085 9.7e-08 60.1 85 51.8
PSO675G6893 Papaver somniferum HOM05D000126 ORTHO05D000085 9.7e-08 60.1 90 54.4
PGR102G1159 Punica granatum HOM05D000126 ORTHO05D000085 9.7e-08 60.1 75 53.3
A10p14900 Brassica napus HOM05D000126 ORTHO05D000085 1.3e-07 59.7 67 56.7
BraA10t43569Z Brassica rapa HOM05D000126 ORTHO05D000085 1.3e-07 59.7 67 56.7
Lj4g0005189 Lotus japonicus HOM05D000126 ORTHO05D000085 1.3e-07 59.7 89 50.6
Solyc12g055810.1 Solanum lycopersicum HOM05D000126 ORTHO05D000085 1.3e-07 59.7 90 48.9
BcaC01g06486 Brassica carinata HOM05D000126 ORTHO05D000085 1.7e-07 59.3 84 50.0
C03p14970 Brassica napus HOM05D000126 ORTHO05D000085 1.7e-07 59.3 84 50.0
BolC3t13939H Brassica oleracea HOM05D000126 ORTHO05D000085 1.7e-07 59.3 84 50.0
Thhalv10013277m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 1.7e-07 59.3 64 56.2
MD13G1255400 Malus domestica HOM05D000126 ORTHO05D000085 2.2e-07 58.9 85 48.2
Sp6g19180 Schrenkiella parvula HOM05D000126 ORTHO05D000085 2.2e-07 58.9 64 56.2
BcaB08g36103 Brassica carinata HOM05D000126 ORTHO05D000085 2.8e-07 58.5 67 55.2
BraA03t10589Z Brassica rapa HOM05D000126 ORTHO05D000085 2.8e-07 58.5 74 51.4
Eucgr.C02298 Eucalyptus grandis HOM05D000126 ORTHO05D000085 2.8e-07 58.5 64 53.1
A03p12810 Brassica napus HOM05D000126 ORTHO05D000085 4.8e-07 57.8 67 55.2
BraA01t01666Z Brassica rapa HOM05D000126 ORTHO05D000085 4.8e-07 57.8 67 56.7
Eucgr.C02465 Eucalyptus grandis HOM05D000126 ORTHO05D000085 4.8e-07 57.8 81 46.9
CDE02G0930 Ceratophyllum demersum HOM05D000126 ORTHO05D000085 8.2e-07 57.0 84 46.4
DCAR_020122 Daucus carota HOM05D000126 ORTHO05D045077 8.2e-07 57.0 82 48.8
FAN07G0207 Fragaria x ananassa HOM05D000126 ORTHO05D000085 8.2e-07 57.0 85 48.2
Phvul.003G146400 Phaseolus vulgaris HOM05D000126 ORTHO05D000085 8.2e-07 57.0 84 48.8
Eucgr.C02301 Eucalyptus grandis HOM05D000126 ORTHO05D000085 1.1e-06 56.6 72 48.6
Psat4g012600 Pisum sativum HOM05D000126 ORTHO05D000085 1.4e-06 56.2 84 46.4
ATR0580G355 Amborella trichopoda HOM05D000126 ORTHO05D000085 2.4e-06 55.5 85 45.9
C09p49320 Brassica napus HOM05D000126 ORTHO05D000085 2.4e-06 55.5 67 52.2
BolC9t57783H Brassica oleracea HOM05D000126 ORTHO05D000085 2.4e-06 55.5 67 52.2
Thhalv10024942m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 2.4e-06 55.5 85 50.6
FAN22G1353 Fragaria x ananassa HOM05D000126 ORTHO05D000085 2.4e-06 55.5 86 46.5
RcHm_v2.0_Chr4g0402591 Rosa chinensis HOM05D000126 ORTHO05D000085 2.4e-06 55.5 80 48.8
Glyma.13G096200 Glycine max HOM05D000126 ORTHO05D000085 3.1e-06 55.1 85 48.2
PSO541G3901 Papaver somniferum HOM05D000126 ORTHO05D000085 3.1e-06 55.1 95 49.5
TWI34G1312 Tripterygium wilfordii HOM05D000126 ORTHO05D000085 3.1e-06 55.1 86 47.7
BolC7t45941H Brassica oleracea HOM05D000126 ORTHO05D000085 5.3e-06 54.3 65 50.8
Sp7g23860 Schrenkiella parvula HOM05D000126 ORTHO05D000085 5.3e-06 54.3 85 45.9
TPR.G5423 Trifolium pratense HOM05D000126 ORTHO05D000085 5.3e-06 54.3 84 47.6
AT4G25835 Arabidopsis thaliana HOM05D000126 ORTHO05D000085 6.9e-06 53.9 81 49.4
C07p54530 Brassica napus HOM05D000126 ORTHO05D000085 6.9e-06 53.9 65 49.2
Carub.0007s1512 Capsella rubella HOM05D000126 ORTHO05D000085 6.9e-06 53.9 82 46.3
Cc06_g13300 Coffea canephora HOM05D000126 ORTHO05D000085 6.9e-06 53.9 52 63.5


User provided reference genes

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