Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 4.3e-286 987.3 481 100.0
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.7e-242 842.4 476 84.9
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 8.5e-234 813.5 479 80.8
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 1.1e-225 786.6 482 79.9
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 3.6e-224 781.6 480 78.3
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.8e-215 752.7 459 78.6
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 3.0e-215 751.9 461 77.7
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 5.2e-215 751.1 463 77.5
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 3.2e-209 731.9 460 75.9
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 9.4e-209 730.3 478 73.8
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.2e-208 729.9 460 75.2
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 8.0e-208 727.2 460 75.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.4e-207 726.5 464 76.5
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 2.3e-207 725.7 460 74.8
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 5.2e-207 724.5 460 75.2
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 8.8e-207 723.8 460 74.6
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 2.0e-206 722.6 460 74.3
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 2.6e-206 722.2 482 74.7
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 5.7e-206 721.1 462 75.1
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.7e-205 719.5 459 74.1
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 2.8e-205 718.8 459 73.9
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 2.8e-205 718.8 468 73.9
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 1.1e-204 716.8 488 72.1
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 5.3e-204 714.5 448 75.7
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 7.0e-204 714.1 460 74.3
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 9.1e-204 713.8 458 73.8
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 2.7e-203 712.2 459 73.4
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 5.9e-203 711.1 456 74.8
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 7.7e-203 710.7 462 74.0
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.3e-202 709.9 460 72.4
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 1.3e-202 709.9 458 73.8
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.7e-202 709.5 460 73.9
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.5e-201 705.7 457 72.4
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 7.2e-201 704.1 478 70.7
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.2e-200 703.4 467 73.0
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.6e-200 703.0 462 72.9
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.6e-200 703.0 458 72.7
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 4.7e-200 701.4 457 72.2
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 8.0e-200 700.7 457 73.3
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 3.0e-199 698.7 448 74.8
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.7e-197 691.8 457 72.2
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.1e-196 690.3 459 71.9
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 3.1e-196 688.7 451 73.8
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 4.1e-196 688.3 462 71.2
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 7.0e-196 687.6 459 71.7
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.3e-194 683.3 449 71.3
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 5.0e-194 681.4 459 71.0
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.5e-193 679.9 476 70.4
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 7.2e-193 677.6 461 71.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 9.5e-193 677.2 461 71.1
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.2e-192 676.8 465 70.3
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.6e-192 676.4 460 70.2
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.4e-191 673.3 460 70.7
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.8e-191 672.9 458 70.1
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 2.6e-190 669.1 437 73.7
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 5.7e-190 667.9 444 71.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 1.3e-189 666.8 460 69.1
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.2e-189 666.0 444 70.9
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.6e-187 659.8 465 69.0
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 2.7e-187 659.1 453 70.2
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 2.7e-187 659.1 453 70.2
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 4.5e-187 658.3 429 73.2
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 5.9e-187 657.9 452 69.5
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 7.8e-187 657.5 453 70.0
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.0e-186 657.1 483 66.5
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 5.0e-186 654.8 453 69.5
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.0e-183 647.1 470 68.5
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 6.8e-183 644.4 469 66.7
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 2.6e-182 642.5 368 82.1
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 4.4e-182 641.7 453 70.4
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 4.4e-182 641.7 387 77.0
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.7e-181 638.6 484 65.1
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 6.4e-181 637.9 461 67.0
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.9e-180 636.3 460 67.6
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 4.1e-180 635.2 437 69.6
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 1.7e-178 629.8 434 70.7
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.7e-178 629.8 387 76.5
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 2.3e-178 629.4 393 75.6
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 4.3e-177 625.2 470 64.7
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 7.3e-177 624.4 471 66.2
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 8.0e-176 620.9 365 78.6
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 3.1e-175 619.0 469 66.1
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.5e-174 616.7 450 67.1
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.7e-173 613.2 395 72.7
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.2e-171 607.1 383 74.9
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 2.1e-171 606.3 385 75.1
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.1e-169 600.5 394 73.1
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 5.6e-169 598.2 470 63.8
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 5.8e-166 588.2 468 63.9
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 2.7e-163 579.3 439 62.0
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 6.8e-159 564.7 457 59.5
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 2.2e-157 559.7 435 60.7
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.1e-156 557.4 334 79.9
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.4e-148 530.4 448 59.4
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 3.3e-145 519.2 487 56.7
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.3e-145 519.2 380 63.9
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 8.2e-120 434.9 312 68.9
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 4.7e-107 392.5 213 87.3
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.5e-97 360.9 458 42.4
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 2.6e-94 350.1 384 45.8
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 5.9e-94 349.0 259 70.3
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 7.7e-94 348.6 220 77.3
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.2e-93 347.1 259 65.6
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 4.8e-88 329.3 436 41.5
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 2.0e-78 297.4 321 52.3
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 3.6e-75 286.6 269 53.9
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.6e-70 271.2 159 80.5
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.6e-60 236.1 155 72.9
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.9e-52 211.1 247 49.8
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.8e-42 177.9 128 66.4
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.4e-33 147.1 121 61.2
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 6.0e-30 136.3 123 56.9
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 3.0e-29 134.0 76 82.9
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 6.2e-27 126.3 70 81.4
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.8e-26 124.8 80 75.0
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-18 99.0 101 54.5
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 4.0e-18 97.1 135 45.2
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.5e-17 95.1 79 51.9
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 5.1e-13 80.1 98 51.0


User provided reference genes

Program Settings