Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 0.0e+00 1672.1 960 100.0
Nn3g21159 Nelumbo nucifera HOM05D012218 ORTHO05D019306 2.8e-111 407.5 996 35.9
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 7.0e-62 243.4 927 30.4
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 3.4e-40 171.4 1062 27.1
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 3.3e-35 154.8 979 24.8
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.2e-32 146.4 1043 26.1
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 2.9e-31 141.7 1021 26.4
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 8.3e-23 113.6 337 32.3
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 2.1e-21 109.0 298 35.6
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 3.5e-21 108.2 1002 24.2
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 4.6e-21 107.8 970 24.0
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 1.3e-20 106.3 988 24.6
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 3.0e-20 105.1 175 41.1
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 5.1e-20 104.4 340 32.6
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 8.6e-20 103.6 189 43.9
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 1.1e-19 103.2 298 35.6
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.9e-19 102.4 982 25.5
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 2.5e-19 102.1 1007 24.2
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 2.1e-18 99.0 409 31.1
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 2.1e-18 99.0 1018 24.4
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 1.2e-16 93.2 278 36.3
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 1.2e-16 93.2 349 32.1
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 1.2e-16 93.2 187 40.1
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 3.4e-16 91.7 331 31.1
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 5.8e-16 90.9 319 33.5
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 7.6e-16 90.5 175 38.9
PSO017G0880 Papaver somniferum HOM05D022603 ORTHO05D019306 9.9e-16 90.1 174 37.9
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 4.9e-15 87.8 977 26.0
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 4.9e-15 87.8 297 30.6
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.4e-14 86.3 967 22.9
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 2.4e-14 85.5 273 34.1
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 3.5e-13 81.6 183 36.6
SalBow6G5290 Salvia bowleyana HOM05D010873 ORTHO05D013124 1.0e-12 80.1 291 28.2
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 1.7e-12 79.3 279 29.4
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 1.7e-12 79.3 278 34.2
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 2.3e-12 79.0 147 38.8
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 3.0e-12 78.6 134 39.6
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 3.0e-12 78.6 134 39.6
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 3.9e-12 78.2 331 29.9
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 5.1e-12 77.8 975 25.3
HPP92_021115 Vanilla planifolia HOM05D012218 ORTHO05D010844 1.5e-11 76.3 328 28.4
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 1.9e-11 75.9 147 38.1
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 2.5e-11 75.5 140 35.7
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 3.3e-11 75.1 168 36.9
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 5.6e-11 74.3 985 23.2
DCAR_022171 Daucus carota HOM05D010873 ORTHO05D013124 7.3e-11 73.9 472 29.4
Solyc05g008490.2 Solanum lycopersicum HOM05D010873 ORTHO05D013124 9.6e-11 73.6 153 32.7
Sopen05g004330 Solanum pennellii HOM05D010873 ORTHO05D013124 9.6e-11 73.6 153 31.4
ECA233G2412 Erigeron canadensis HOM05D037976 ORTHO05D035162 2.1e-10 72.4 174 35.1
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 2.8e-10 72.0 186 36.0
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 8.1e-10 70.5 342 32.7
PGSC0003DMG400030562 Solanum tuberosum HOM05D010873 ORTHO05D013124 2.4e-09 68.9 153 31.4
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 2.0e-08 65.9 324 27.5
AUR62000557 Chenopodium quinoa HOM05D030946 ORTHO05D010844 4.4e-08 64.7 88 46.6
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 1.7e-07 62.8 86 40.7
FvH4_5g34270 Fragaria vesca HOM05D012473 ORTHO05D010844 2.2e-07 62.4 298 29.9
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 6.4e-07 60.8 321 28.3
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 6.4e-07 60.8 320 26.2
CDE06G2680 Ceratophyllum demersum HOM05D041736 ORTHO05D034253 1.1e-06 60.1 166 35.5
Oeu028233.1 Olea europaea HOM05D010873 ORTHO05D013124 1.1e-06 60.1 288 25.3
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 1.4e-06 59.7 941 23.3
FAN08G2906 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.4e-06 58.9 179 33.0
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 4.2e-06 58.2 426 26.8
PSO384G0752 Papaver somniferum HOM05D022603 ORTHO05D019306 4.2e-06 58.2 280 27.5
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 5.4e-06 57.8 178 30.3


User provided reference genes

Program Settings