Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 4.9e-84 314.3 146 100.0
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 3.1e-78 295.0 133 99.2
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 4.6e-74 281.2 131 95.4
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 6.0e-74 280.8 131 94.7
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 1.7e-73 279.3 131 94.7
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 3.0e-73 278.5 131 94.7
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 3.9e-73 278.1 131 94.7
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 5.1e-73 277.7 131 94.7
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 6.6e-73 277.3 131 94.7
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 8.7e-73 276.9 132 92.4
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 1.5e-72 276.2 131 93.9
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 1.5e-72 276.2 131 93.9
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 1.5e-72 276.2 131 93.9
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.5e-72 276.2 131 93.9
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 1.9e-72 275.8 131 93.1
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 1.9e-72 275.8 131 93.1
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 4.3e-72 274.6 131 92.4
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 4.3e-72 274.6 131 93.9
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 5.6e-72 274.2 131 93.1
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 5.6e-72 274.2 131 93.1
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 5.6e-72 274.2 131 92.4
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 5.6e-72 274.2 131 93.1
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 5.6e-72 274.2 131 92.4
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 5.6e-72 274.2 131 92.4
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 7.3e-72 273.9 133 89.5
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 7.3e-72 273.9 131 92.4
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 7.3e-72 273.9 131 92.4
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 7.3e-72 273.9 131 92.4
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 7.3e-72 273.9 131 93.1
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 7.3e-72 273.9 131 93.1
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 9.6e-72 273.5 131 92.4
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 9.6e-72 273.5 131 93.1
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 1.2e-71 273.1 131 91.6
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 1.2e-71 273.1 131 92.4
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 1.2e-71 273.1 131 91.6
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.2e-71 273.1 131 93.1
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.6e-71 272.7 131 91.6
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 1.6e-71 272.7 131 92.4
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 2.1e-71 272.3 131 93.1
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 2.1e-71 272.3 131 91.6
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 2.1e-71 272.3 131 91.6
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 2.1e-71 272.3 131 91.6
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 2.1e-71 272.3 131 91.6
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 2.8e-71 271.9 131 92.4
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 2.8e-71 271.9 131 91.6
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 2.8e-71 271.9 131 92.4
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 2.8e-71 271.9 131 91.6
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 2.8e-71 271.9 131 91.6
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 3.6e-71 271.6 131 91.6
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 3.6e-71 271.6 131 91.6
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 4.7e-71 271.2 131 91.6
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 4.7e-71 271.2 131 91.6
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 4.7e-71 271.2 131 90.8
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 4.7e-71 271.2 131 90.8
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 4.7e-71 271.2 131 91.6
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 8.1e-71 270.4 131 90.8
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 8.1e-71 270.4 131 91.6
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 8.1e-71 270.4 131 90.8
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 8.1e-71 270.4 139 88.5
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 8.1e-71 270.4 131 92.4
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 1.1e-70 270.0 131 90.8
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.1e-70 270.0 131 90.8
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.1e-70 270.0 131 90.8
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 1.4e-70 269.6 131 90.8
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 1.4e-70 269.6 131 90.8
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.8e-70 269.2 131 90.1
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 1.8e-70 269.2 131 91.6
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 1.8e-70 269.2 131 90.8
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 2.4e-70 268.9 131 88.5
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 2.4e-70 268.9 131 88.5
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 2.4e-70 268.9 131 88.5
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 2.4e-70 268.9 131 89.3
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.1e-70 268.5 131 90.1
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.1e-70 268.5 131 90.1
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 4.0e-70 268.1 131 90.1
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 4.0e-70 268.1 131 89.3
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 5.2e-70 267.7 131 90.1
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 5.2e-70 267.7 131 90.1
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 5.2e-70 267.7 131 90.1
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 5.2e-70 267.7 131 90.1
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 6.9e-70 267.3 131 89.3
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 6.9e-70 267.3 131 90.1
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 9.0e-70 266.9 131 87.8
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 1.2e-69 266.5 131 88.5
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 1.2e-69 266.5 131 89.3
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 1.2e-69 266.5 131 87.8
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 1.5e-69 266.2 131 88.5
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 2.0e-69 265.8 131 88.5
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 2.0e-69 265.8 131 87.8
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 2.0e-69 265.8 131 89.3
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 2.6e-69 265.4 131 87.8
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 3.4e-69 265.0 131 87.8
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 3.4e-69 265.0 131 87.8
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 3.4e-69 265.0 131 87.8
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 3.4e-69 265.0 131 87.8
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 3.4e-69 265.0 131 87.8
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 4.4e-69 264.6 131 87.0
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 4.4e-69 264.6 131 87.0
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 4.4e-69 264.6 131 88.5
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 5.8e-69 264.2 131 87.0
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 7.6e-69 263.8 131 88.5
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 7.6e-69 263.8 131 88.5
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 7.6e-69 263.8 131 89.3
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 7.6e-69 263.8 131 89.3
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 9.9e-69 263.5 131 87.0
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 1.7e-68 262.7 131 87.0
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 2.2e-68 262.3 131 90.8
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 2.9e-68 261.9 131 87.0
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 2.9e-68 261.9 131 88.5
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 2.4e-67 258.8 131 88.5
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 1.2e-66 256.5 131 86.3
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 2.7e-66 255.4 131 86.3
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 5.1e-65 251.1 131 83.2
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 3.6e-63 245.0 131 81.7
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 1.1e-62 243.4 131 80.2
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 1.8e-62 242.7 125 87.2
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 2.0e-61 239.2 129 82.9
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 1.7e-60 236.1 131 78.6
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 1.1e-59 233.4 131 77.1
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 1.6e-58 229.6 124 83.1
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 3.0e-57 225.3 112 89.3
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 1.1e-56 223.4 131 74.0
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 1.5e-56 223.0 112 87.5
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 9.6e-56 220.3 106 89.6
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 2.8e-55 218.8 114 87.7
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 1.4e-54 216.5 131 67.9
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 5.3e-54 214.5 125 76.0
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 2.4e-51 205.7 135 73.3
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 9.3e-51 203.8 112 77.7
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 4.6e-50 201.4 130 66.9
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 7.4e-48 194.1 104 83.7
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 1.4e-43 179.9 91 89.0
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 4.1e-38 161.8 131 56.5
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 7.2e-35 151.0 75 85.3
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 7.9e-34 147.5 113 65.5
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 4.7e-26 121.7 63 81.0
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 1.2e-18 97.1 88 52.3
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 8.0e-18 94.4 89 52.8
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 1.0e-17 94.0 85 60.0
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 2.0e-16 89.7 92 54.3


User provided reference genes

Program Settings