Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 2.5e-41 171.8 92 100.0
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 3.6e-24 114.8 93 68.8
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 4.7e-24 114.4 91 70.3
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 3.0e-23 111.7 92 67.4
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 2.0e-22 109.0 90 67.8
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 2.0e-22 109.0 91 65.9
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 2.0e-22 109.0 91 65.9
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 3.4e-22 108.2 90 64.4
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 3.4e-22 108.2 90 65.6
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 7.5e-22 107.1 92 63.0
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 7.5e-22 107.1 91 64.8
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 9.8e-22 106.7 91 62.6
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 1.3e-21 106.3 91 62.6
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.3e-21 106.3 90 64.4
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.7e-21 105.9 93 65.6
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 1.7e-21 105.9 91 64.8
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 2.8e-21 105.1 91 64.8
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 6.3e-21 104.0 93 64.5
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 6.3e-21 104.0 92 62.0
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 8.3e-21 103.6 77 71.4
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 1.8e-20 102.4 80 72.5
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 2.4e-20 102.1 90 66.7
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 2.4e-20 102.1 93 64.5
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 4.1e-20 101.3 78 70.5
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 9.1e-20 100.1 80 68.8
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 9.1e-20 100.1 84 66.7
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 1.6e-19 99.4 91 57.1
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.6e-19 99.4 91 60.4
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 1.6e-19 99.4 91 60.4
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 2.0e-19 99.0 84 66.7
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.0e-19 99.0 84 66.7
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.0e-19 99.0 84 65.5
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 2.0e-19 99.0 92 63.0
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 2.7e-19 98.6 90 60.0
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.7e-19 98.6 92 63.0
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 3.5e-19 98.2 82 64.6
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 3.5e-19 98.2 91 59.3
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 7.7e-19 97.1 80 66.2
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 7.7e-19 97.1 91 63.7
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.0e-18 96.7 91 59.3
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 2.2e-18 95.5 91 58.2
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 2.2e-18 95.5 80 67.5
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 3.8e-18 94.7 91 58.2
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 6.5e-18 94.0 80 65.0
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 6.5e-18 94.0 91 59.3
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 1.1e-17 93.2 94 59.6
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 4.2e-17 91.3 93 60.2
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 4.2e-17 91.3 88 58.0
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 7.2e-17 90.5 91 59.3
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 1.2e-16 89.7 88 55.7
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 1.6e-16 89.4 91 57.1
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.8e-16 88.6 81 65.4
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 2.8e-16 88.6 81 65.4
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 2.8e-16 88.6 91 57.1
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 3.6e-16 88.2 90 57.8
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 3.6e-16 88.2 92 57.6
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 4.7e-16 87.8 81 65.4
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 4.7e-16 87.8 91 58.2
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 6.1e-16 87.4 79 68.4
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 6.1e-16 87.4 90 56.7
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 8.0e-16 87.0 90 56.7
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 1.0e-15 86.7 92 53.3
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.4e-15 86.3 92 52.2
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 1.8e-15 85.9 77 61.0
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 2.3e-15 85.5 83 60.2
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 3.0e-15 85.1 81 63.0
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 3.0e-15 85.1 83 54.2
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 6.8e-15 84.0 88 60.2
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 1.2e-14 83.2 92 54.3
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 1.5e-14 82.8 80 56.2
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.6e-14 82.0 77 61.0
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.6e-14 82.0 77 61.0
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 5.7e-14 80.9 83 60.2
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.3e-13 79.7 76 63.2
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 3.7e-13 78.2 77 61.0
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 4.9e-13 77.8 91 49.5
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 4.9e-13 77.8 95 54.7
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 9.2e-12 73.6 83 55.4
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 9.2e-12 73.6 70 58.6
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 2.7e-11 72.0 100 45.0
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 5.9e-11 70.9 92 45.7
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 1.7e-10 69.3 79 51.9
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 1.1e-09 66.6 85 44.7
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 1.9e-09 65.9 71 59.2
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 2.5e-09 65.5 92 46.7
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 3.3e-09 65.1 93 46.2
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 9.5e-09 63.5 95 44.2
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.2e-08 63.2 71 52.1
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 1.2e-08 63.2 92 45.7
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 2.8e-08 62.0 95 45.3
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 6.1e-08 60.8 77 54.5
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 3.0e-07 58.5 94 43.6
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-07 58.5 61 50.8
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 3.4e-06 55.1 60 50.0


User provided reference genes

Program Settings