Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 8.9e-132 473.8 269 100.0
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 4.8e-93 345.1 266 74.1
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 6.2e-93 344.7 268 73.9
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 1.5e-86 323.6 268 71.6
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 5.6e-86 321.6 261 73.2
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.7e-82 310.1 268 67.9
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.6e-80 302.0 265 64.9
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 4.6e-80 302.0 264 68.6
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 6.0e-80 301.6 264 67.8
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 5.3e-76 288.5 265 61.5
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 5.9e-75 285.0 261 66.3
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.3e-74 283.9 267 60.7
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 2.2e-74 283.1 262 65.3
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 3.8e-74 282.3 263 62.7
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 5.0e-74 282.0 262 63.0
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.4e-73 280.4 263 60.1
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 1.9e-73 280.0 262 63.7
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 2.5e-73 279.6 266 62.0
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.2e-72 277.3 266 60.5
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 6.1e-72 275.0 263 62.4
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.8e-71 273.5 268 62.3
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 3.0e-71 272.7 268 63.4
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.3e-70 268.9 262 62.2
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 7.4e-70 268.1 268 60.8
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.2e-69 266.5 266 62.0
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 2.8e-69 266.2 265 58.1
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.4e-68 263.8 265 59.2
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.8e-68 263.5 258 60.9
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 3.1e-68 262.7 268 62.3
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 6.9e-68 261.5 262 61.5
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 1.2e-67 260.8 268 58.6
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.5e-67 258.8 262 60.7
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.0e-66 257.7 263 56.7
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.3e-66 257.3 263 58.9
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 2.2e-66 256.5 260 58.8
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 3.2e-65 252.7 265 61.1
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 7.2e-65 251.5 265 57.4
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 4.6e-64 248.8 267 56.2
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 6.1e-64 248.4 257 58.4
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.9e-64 248.1 266 59.0
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 2.3e-63 246.5 264 56.4
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.1e-63 245.4 265 55.5
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.5e-62 243.8 260 56.9
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 4.8e-61 238.8 265 53.6
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.4e-60 237.3 266 55.3
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 4.5e-59 232.3 261 55.6
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 2.1e-56 223.4 265 53.6
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.1e-56 223.4 267 50.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 4.7e-56 222.2 264 52.3
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 4.7e-56 222.2 264 52.3
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 1.4e-55 220.7 266 52.6
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.3e-55 219.9 259 50.2
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.5e-54 217.2 263 51.7
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.5e-54 217.2 263 51.7
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.4e-54 214.9 266 54.1
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 7.0e-52 208.4 263 49.4
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.6e-51 207.2 263 50.2
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 2.0e-51 206.8 266 48.9
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.0e-51 206.8 269 48.7
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.0e-51 206.8 269 48.7
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 2.6e-51 206.5 267 51.7
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 4.5e-51 205.7 266 52.6
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.5e-51 205.7 266 52.6
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 5.9e-51 205.3 267 52.1
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 4.7e-48 195.7 268 50.0
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 3.0e-47 193.0 265 47.9
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.5e-46 190.7 263 47.5
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 4.4e-46 189.1 264 47.3
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.7e-45 187.2 188 59.0
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.7e-45 187.2 264 48.9
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 4.8e-45 185.7 267 46.4
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 1.4e-44 184.1 234 51.7
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 4.5e-43 179.1 269 45.4
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.3e-42 177.6 268 45.5
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.9e-41 173.7 265 44.9
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 9.4e-41 171.4 185 54.1
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 3.4e-38 162.9 257 46.3
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 9.8e-38 161.4 265 42.6
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 3.5e-35 152.9 229 45.0
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 2.3e-34 150.2 241 41.5
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 8.6e-34 148.3 266 38.3
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 2.3e-31 140.2 173 52.6
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 8.8e-31 138.3 154 57.1
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 1.2e-30 137.9 264 40.5
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.2e-29 133.7 194 50.0
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 6.3e-29 132.1 222 41.4
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 1.1e-28 131.3 253 41.1
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.1e-28 131.3 193 47.2
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 2.4e-28 130.2 233 39.5
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.7e-21 107.5 125 52.0
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.7e-13 80.9 80 62.5
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 3.7e-13 79.7 72 61.1
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 1.5e-09 67.8 72 52.8
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 7.3e-09 65.5 75 50.7


User provided reference genes

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