Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 8.2e-115 417.2 224 100.0
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.9e-80 302.0 236 75.0
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 8.3e-75 284.3 232 71.6
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 2.3e-72 276.2 237 69.6
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 3.9e-72 275.4 238 70.2
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 5.0e-72 275.0 227 71.8
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 7.3e-71 271.2 231 70.1
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 1.2e-70 270.4 227 71.8
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.2e-70 270.4 231 71.0
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 1.6e-70 270.0 228 71.5
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 2.8e-70 269.2 227 70.9
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.8e-69 266.5 231 68.4
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.3e-69 266.2 224 70.1
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 4.0e-69 265.4 230 69.1
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 6.8e-69 264.6 232 69.8
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 6.8e-69 264.6 233 67.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 8.9e-69 264.2 231 68.4
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 2.6e-68 262.7 231 67.1
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.4e-68 262.3 224 69.6
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 4.4e-68 261.9 224 69.6
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.7e-67 260.0 227 69.2
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.7e-67 260.0 221 70.1
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 2.2e-67 259.6 224 69.2
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.9e-67 258.5 221 68.3
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.9e-67 258.5 167 85.0
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.1e-66 257.3 222 67.6
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.4e-66 256.9 179 78.8
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.4e-66 256.1 222 68.0
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.4e-66 256.1 233 66.5
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 3.2e-66 255.8 225 67.1
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 4.1e-66 255.4 171 80.7
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 9.2e-66 254.2 225 67.1
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.2e-65 253.8 171 80.1
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.6e-65 253.4 230 67.0
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.1e-65 253.1 169 81.1
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 2.1e-65 253.1 224 67.4
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 2.1e-65 253.1 182 74.2
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.7e-65 252.7 239 66.1
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.7e-65 252.7 220 68.6
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 3.5e-65 252.3 171 77.8
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 4.6e-65 251.9 214 68.2
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.6e-65 251.9 223 66.8
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 4.6e-65 251.9 168 81.0
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 6.0e-65 251.5 223 67.3
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 6.0e-65 251.5 227 66.5
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.0e-64 250.8 225 66.7
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.3e-64 250.4 234 65.4
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.3e-64 250.4 171 81.9
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.7e-64 250.0 237 65.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 3.0e-64 249.2 171 81.3
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 3.9e-64 248.8 226 66.4
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 3.9e-64 248.8 226 66.4
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 3.9e-64 248.8 171 81.9
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 5.1e-64 248.4 222 66.7
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 6.6e-64 248.1 172 77.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.1e-63 247.3 208 67.3
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 4.3e-63 245.4 175 81.1
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 4.7e-62 241.9 170 80.6
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 6.2e-62 241.5 224 66.1
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.3e-61 239.6 170 78.2
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 2.3e-61 239.6 236 65.3
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.1e-61 239.2 220 63.6
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 6.8e-61 238.0 172 82.0
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 8.9e-61 237.7 213 69.5
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 8.9e-61 237.7 171 79.5
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.2e-60 237.3 178 75.8
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 2.0e-60 236.5 173 76.9
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 3.4e-60 235.7 177 75.1
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.3e-59 233.8 190 71.1
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.7e-59 233.4 211 68.7
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.2e-59 233.0 180 72.8
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 3.7e-59 232.3 190 72.6
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 4.9e-59 231.9 172 72.1
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 6.4e-59 231.5 173 73.4
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 6.4e-59 231.5 227 63.0
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.9e-58 229.9 258 57.8
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 3.2e-58 229.2 174 74.1
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 4.1e-58 228.8 196 67.9
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.2e-57 227.3 182 72.0
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 2.7e-57 226.1 224 62.9
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 4.6e-57 225.3 231 62.8
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 4.6e-57 225.3 206 64.6
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 6.0e-57 224.9 171 74.9
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 7.8e-57 224.6 159 78.6
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.7e-56 223.4 171 74.3
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 2.3e-56 223.0 148 85.1
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 3.9e-56 222.2 205 64.4
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.9e-55 219.9 205 64.4
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 4.3e-55 218.8 192 66.1
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 5.6e-55 218.4 125 91.2
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 1.4e-53 213.8 214 62.6
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 6.8e-53 211.5 181 68.0
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 2.0e-52 209.9 182 69.2
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 2.0e-52 209.9 162 75.9
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.3e-51 207.2 248 56.0
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 1.3e-51 207.2 193 64.2
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 8.4e-51 204.5 149 77.2
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.4e-50 203.0 123 86.2
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.2e-49 200.7 179 64.8
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.2e-49 200.7 179 64.8
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 6.0e-49 198.4 158 74.7
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 7.8e-49 198.0 167 62.3
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.1e-47 194.1 251 51.8
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 6.9e-45 184.9 323 44.6
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.6e-44 183.0 154 62.3
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 4.2e-42 175.6 172 55.8
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 4.2e-42 175.6 150 68.0
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.7e-40 170.2 151 58.9
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 9.6e-39 164.5 140 60.7
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 6.4e-35 151.8 108 76.9
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.1e-31 141.0 167 54.5
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 7.4e-31 138.3 188 45.2
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.2e-27 126.7 98 71.4
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.2e-27 126.7 120 62.5
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.2e-25 120.9 98 62.2
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.8e-24 117.1 93 74.2
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 3.7e-22 109.4 91 68.1
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 1.4e-21 107.5 164 38.4
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 5.3e-21 105.5 196 38.3
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 5.9e-20 102.1 147 47.6
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 2.2e-19 100.1 71 77.5


User provided reference genes

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