Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 9.4e-209 729.9 369 100.0
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.2e-142 510.4 387 73.1
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 2.6e-118 429.5 386 64.5
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 2.6e-118 429.5 393 63.1
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 4.5e-118 428.7 386 64.5
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 7.7e-118 427.9 395 61.5
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 6.5e-117 424.9 390 63.3
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.4e-116 423.7 384 62.2
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.4e-116 423.7 412 60.2
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 7.2e-116 421.4 385 63.6
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 9.4e-116 421.0 388 62.4
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.4e-114 417.2 401 61.1
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 3.9e-114 415.6 387 62.3
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 5.1e-114 415.2 388 61.6
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 6.7e-114 414.8 380 63.4
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 1.3e-112 410.6 401 60.3
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.7e-112 410.2 401 60.1
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 6.3e-112 408.3 387 60.7
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 7.0e-111 404.8 387 60.7
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 7.0e-111 404.8 385 60.5
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 1.5e-110 403.7 387 58.7
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 4.5e-110 402.1 383 61.9
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 7.7e-110 401.4 387 59.9
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 1.7e-109 400.2 387 58.7
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 2.9e-109 399.4 388 59.5
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 5.0e-109 398.7 382 59.9
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 5.0e-109 398.7 382 59.4
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 1.4e-108 397.1 383 60.1
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 3.2e-108 396.0 388 60.1
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 2.1e-107 393.3 385 59.7
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 3.6e-107 392.5 388 58.2
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 1.8e-106 390.2 401 57.9
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 8.8e-106 387.9 384 58.9
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 1.1e-105 387.5 383 57.4
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 2.6e-105 386.3 387 58.1
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 2.6e-105 386.3 384 60.4
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 5.7e-105 385.2 383 60.1
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 9.7e-105 384.4 384 59.1
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.7e-104 383.6 364 61.8
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 4.1e-103 379.0 389 57.8
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.6e-102 377.1 426 55.4
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 4.5e-102 375.6 387 57.6
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.3e-101 374.0 379 56.5
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.3e-101 374.0 379 56.5
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.3e-101 374.0 377 58.9
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 2.9e-101 372.9 387 55.8
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 6.5e-101 371.7 384 57.3
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 8.5e-101 371.3 389 55.3
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 1.2e-99 367.5 275 72.4
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.6e-99 367.1 382 55.0
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 2.7e-99 366.3 383 58.0
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 2.7e-99 366.3 378 55.8
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 6.1e-99 365.2 405 53.3
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 6.1e-99 365.2 390 55.9
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 8.0e-99 364.8 383 56.9
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 5.2e-98 362.1 382 53.9
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.2e-97 360.9 343 61.8
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 1.5e-97 360.5 383 55.4
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 2.0e-97 360.1 396 53.5
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 2.6e-97 359.8 396 52.3
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 3.4e-97 359.4 383 55.4
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 7.5e-97 358.2 389 54.2
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 1.3e-96 357.5 378 55.8
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 3.7e-96 355.9 381 53.8
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 1.1e-95 354.4 390 53.6
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 3.5e-94 349.4 386 54.1
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 1.0e-93 347.8 388 52.8
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 2.9e-93 346.3 377 54.1
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 3.8e-93 345.9 383 55.1
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.1e-92 344.4 377 52.3
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.5e-92 343.2 388 52.3
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 2.5e-92 343.2 380 54.2
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 4.2e-92 342.4 388 52.3
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 5.5e-92 342.0 388 52.8
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 1.8e-90 337.0 381 52.2
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 2.3e-90 336.7 378 50.8
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 4.0e-90 335.9 381 51.2
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 8.8e-90 334.7 384 51.6
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 1.5e-89 334.0 378 50.5
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 5.7e-89 332.0 376 50.3
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 5.7e-89 332.0 388 49.5
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 7.5e-89 331.6 379 51.7
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 4.8e-88 328.9 380 51.3
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 6.3e-88 328.6 378 50.3
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 6.3e-88 328.6 377 49.9
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 1.2e-86 324.3 412 48.8
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 5.0e-85 318.9 393 51.4
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.9e-84 317.0 392 51.3
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.9e-84 317.0 378 51.6
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 2.8e-83 313.2 378 48.9
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 4.7e-83 312.4 274 63.1
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.8e-82 310.5 358 52.0
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 3.4e-81 306.2 383 49.3
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 2.8e-80 303.1 386 48.7
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 7.0e-79 298.5 381 48.6
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 1.2e-78 297.7 417 47.0
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 3.9e-77 292.7 387 45.5
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 2.2e-72 276.9 416 42.8
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 2.2e-72 276.9 230 62.2
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 8.3e-72 275.0 277 57.8
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 1.6e-70 270.8 265 56.6
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 7.1e-63 245.4 270 51.5
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 5.8e-57 225.7 229 55.5
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 1.5e-52 211.1 221 52.9
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 5.6e-52 209.1 404 41.1
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 3.8e-48 196.4 391 36.1
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 8.4e-48 195.3 468 32.5
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 3.0e-45 186.8 411 37.2
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.6e-43 181.0 168 60.7
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 1.5e-41 174.5 336 39.9
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 2.2e-40 170.6 179 52.5
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 4.9e-40 169.5 266 42.1
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 7.1e-39 165.6 195 49.7
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 6.9e-34 149.1 113 64.6
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 3.4e-33 146.7 389 33.2
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 2.3e-29 134.0 178 47.8
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.6e-27 127.9 280 37.1
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 8.4e-24 115.5 197 39.6
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 7.6e-17 92.4 61 73.8
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 5.5e-15 86.3 122 44.3
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 3.0e-13 80.5 63 65.1
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 5.1e-13 79.7 440 26.4
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 8.7e-13 79.0 101 43.6
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 9.7e-12 75.5 111 46.8
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 1.3e-11 75.1 58 70.7
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.6e-11 74.7 258 27.5
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 3.7e-11 73.6 63 60.3
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.1e-10 72.0 93 43.0
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 3.1e-10 70.5 111 44.1
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 9.0e-10 68.9 53 58.5
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 7.7e-09 65.9 162 32.7
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.9e-07 61.2 77 50.6
GSVIVG01036155001 Vitis vinifera HOM05D005709 ORTHO05D006306 2.7e-06 57.4 53 49.1


User provided reference genes

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