Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1585 Trochodendron aralioides HOM05D007321 ORTHO05D009244 1.0e-47 193.0 91 100.0
Rhsim05G0110900 Rhododendron simsii HOM05D007321 ORTHO05D009244 5.3e-28 127.5 85 72.9
Cfa005577 Carpinus fangiana HOM05D007321 ORTHO05D009244 2.0e-27 125.6 86 72.1
Dinv19324 Davidia involucrata HOM05D007321 ORTHO05D009244 3.4e-27 124.8 72 80.6
CiPaw.05G039000 Carya illinoinensis HOM05D007321 ORTHO05D009244 1.7e-26 122.5 86 70.9
MD03G1054600 Malus domestica HOM05D007321 ORTHO05D009244 2.9e-26 121.7 86 69.8
Actinidia28071 Actinidia chinensis HOM05D007321 ORTHO05D009244 3.8e-26 121.3 72 76.4
DCAR_021840 Daucus carota HOM05D000446 ORTHO05D000321 6.5e-26 120.6 72 79.2
CDE06G0306 Ceratophyllum demersum HOM05D007321 ORTHO05D009244 8.4e-26 120.2 72 72.2
Lj5P243T60 Lonicera japonica HOM05D007321 ORTHO05D009244 1.1e-25 119.8 85 69.4
Nn1g05198 Nelumbo nucifera HOM05D007321 ORTHO05D009244 1.1e-25 119.8 72 77.8
Eucgr.I02693 Eucalyptus grandis HOM05D007321 ORTHO05D009244 1.4e-25 119.4 85 68.2
FAN25G3421 Fragaria x ananassa HOM05D007321 ORTHO05D009244 1.9e-25 119.0 85 68.2
FvH4_3g40270 Fragaria vesca HOM05D007321 ORTHO05D009244 3.2e-25 118.2 85 67.1
FAN11G3563 Fragaria x ananassa HOM05D007321 ORTHO05D009244 4.2e-25 117.9 85 67.1
FAN16G2899 Fragaria x ananassa HOM05D007321 ORTHO05D009244 4.2e-25 117.9 85 67.1
FAN21G2259 Fragaria x ananassa HOM05D007321 ORTHO05D009244 4.2e-25 117.9 85 67.1
TWI59G1034 Tripterygium wilfordii HOM05D007321 ORTHO05D009244 4.2e-25 117.9 72 75.0
Atru.chr6.902 Acer truncatum HOM05D007321 ORTHO05D009244 5.5e-25 117.5 72 73.6
Aqoxy6G00494 Aquilegia oxysepala HOM05D007321 ORTHO05D009244 5.5e-25 117.5 72 77.8
RcHm_v2.0_Chr5g0072531 Rosa chinensis HOM05D007321 ORTHO05D009244 5.5e-25 117.5 85 67.1
GSVIVG01029706001 Vitis vinifera HOM05D007321 ORTHO05D009244 5.5e-25 117.5 72 73.6
Thecc.02G143600 Theobroma cacao HOM05D007321 ORTHO05D009244 9.3e-25 116.7 72 76.4
QL11p019400 Quercus lobata HOM05D007321 ORTHO05D009244 2.1e-24 115.5 86 66.3
ClCG10G015890 Citrullus lanatus HOM05D007321 ORTHO05D009244 2.7e-24 115.2 72 75.0
Sc14g0002750 Simmondsia chinensis HOM05D007321 ORTHO05D009244 2.7e-24 115.2 86 65.1
MBI05_g36588_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 3.5e-24 114.8 72 70.8
MELO3C009790.2 Cucumis melo HOM05D007321 ORTHO05D009244 4.6e-24 114.4 72 72.2
Manes.16G135300 Manihot esculenta HOM05D007321 ORTHO05D009244 4.6e-24 114.4 84 65.5
A05p39470 Brassica napus HOM05D007321 ORTHO05D009244 6.0e-24 114.0 86 67.4
BraA05t22728Z Brassica rapa HOM05D007321 ORTHO05D009244 6.0e-24 114.0 86 67.4
CsaV3_3G040590 Cucumis sativus L. HOM05D007321 ORTHO05D009244 6.0e-24 114.0 72 72.2
Glyma.05G120300 Glycine max HOM05D007321 ORTHO05D009244 6.0e-24 114.0 86 65.1
Phvul.002G206500 Phaseolus vulgaris HOM05D007321 ORTHO05D009244 7.9e-24 113.6 86 64.0
VMungo0251G3312 Vigna mungo HOM05D007321 ORTHO05D009244 7.9e-24 113.6 86 62.8
Prupe.6G043200 Prunus persica HOM05D007321 ORTHO05D009244 1.0e-23 113.2 72 73.6
AUR62027387 Chenopodium quinoa HOM05D007321 ORTHO05D009244 1.3e-23 112.8 85 61.2
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 1.3e-23 112.8 72 72.2
Cpa.g.sc52.12 Carica papaya HOM05D007321 ORTHO05D009244 1.8e-23 112.5 85 64.7
BcaC05g29686 Brassica carinata HOM05D007321 ORTHO05D009244 2.3e-23 112.1 86 65.1
Cc02_g21870 Coffea canephora HOM05D007321 ORTHO05D009244 2.3e-23 112.1 86 61.6
Duzib052G0820 Durio zibethinus HOM05D007321 ORTHO05D009244 2.3e-23 112.1 72 73.6
Thhalv10003042m.g Eutrema salsugineum HOM05D007321 ORTHO05D009244 2.3e-23 112.1 86 65.1
PSO675G7953 Papaver somniferum HOM05D007321 ORTHO05D009244 3.0e-23 111.7 72 75.0
PGR142G0984 Punica granatum HOM05D007321 ORTHO05D009244 3.0e-23 111.7 85 61.2
C05p58490 Brassica napus HOM05D007321 ORTHO05D009244 3.9e-23 111.3 86 65.1
BolC5t34500H Brassica oleracea HOM05D007321 ORTHO05D009244 3.9e-23 111.3 86 65.1
Ciclev10004047m.g Citrus clementina HOM05D007321 ORTHO05D009244 3.9e-23 111.3 72 69.4
Lsat_1_v5_gn_7_80180 Lactuca sativa HOM05D007321 ORTHO05D009244 5.1e-23 110.9 73 71.2
AT3G09580 Arabidopsis thaliana HOM05D007321 ORTHO05D009244 6.7e-23 110.5 86 64.0
Sed0000618 Sechium edule HOM05D007321 ORTHO05D009244 6.7e-23 110.5 76 68.4
SEGI_02418 Sequoiadendron giganteum HOM05D007321 ORTHO05D009244 6.7e-23 110.5 72 70.8
HanXRQChr11g0337111 Helianthus annuus HOM05D007321 ORTHO05D009244 1.1e-22 109.8 86 60.5
Lj4g0025169 Lotus japonicus HOM05D007321 ORTHO05D009244 1.1e-22 109.8 72 68.1
PSO541G5651 Papaver somniferum HOM05D007321 ORTHO05D009244 1.1e-22 109.8 72 73.6
AL3G20750 Arabidopsis lyrata HOM05D007321 ORTHO05D009244 1.5e-22 109.4 86 64.0
Lalb_Chr07g0189441 Lupinus albus HOM05D007321 ORTHO05D009244 1.5e-22 109.4 72 69.4
Gohir.A04G112300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 1.9e-22 109.0 72 69.4
Gohir.D04G153300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 1.9e-22 109.0 72 69.4
Gorai.012G140200 Gossypium raimondii HOM05D007321 ORTHO05D009244 1.9e-22 109.0 72 69.4
MBI05_g44826_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 2.5e-22 108.6 72 68.1
Sp3g07930 Schrenkiella parvula HOM05D007321 ORTHO05D009244 2.5e-22 108.6 86 64.0
Mapoly0005s0009 Marchantia polymorpha HOM05D007321 ORTHO05D009244 4.3e-22 107.8 72 70.8
Potri.001G344800 Populus trichocarpa HOM05D007321 ORTHO05D009244 4.3e-22 107.8 72 66.7
CARHR083990 Cardamine hirsuta HOM05D007321 ORTHO05D009244 5.7e-22 107.5 86 62.8
MSTRG.16564 Avicennia marina HOM05D007321 ORTHO05D009244 7.4e-22 107.1 72 68.1
AUR62031301 Chenopodium quinoa HOM05D007321 ORTHO05D009244 7.4e-22 107.1 75 65.3
Medtr4g094295 Medicago truncatula HOM05D007321 ORTHO05D009244 7.4e-22 107.1 72 63.9
THA.LOC104826997 Tarenaya hassleriana HOM05D007321 ORTHO05D009244 7.4e-22 107.1 86 65.1
EL10Ac8g19338 Beta vulgaris HOM05D007321 ORTHO05D009244 9.7e-22 106.7 86 59.3
ECA236G2671 Erigeron canadensis HOM05D007321 ORTHO05D009244 9.7e-22 106.7 85 58.8
Migut.B00640 Erythranthe guttata HOM05D007321 ORTHO05D009244 9.7e-22 106.7 72 68.1
Nitab4.5_0002105g0030 Nicotiana tabacum HOM05D007321 ORTHO05D009244 1.6e-21 105.9 85 58.8
Oeu037200.1 Olea europaea HOM05D007321 ORTHO05D009244 1.6e-21 105.9 72 66.7
CANSAT80G1420 Cannabis sativa HOM05D007321 ORTHO05D009244 2.2e-21 105.5 77 66.2
Nitab4.5_0007385g0020 Nicotiana tabacum HOM05D007321 ORTHO05D009244 2.2e-21 105.5 85 58.8
Psat1g188000 Pisum sativum HOM05D007321 ORTHO05D009244 2.8e-21 105.1 72 65.3
Sabra16G0223900 Salix brachista HOM05D007321 ORTHO05D009244 2.8e-21 105.1 72 68.1
Sopen02g028190 Solanum pennellii HOM05D007321 ORTHO05D009244 2.8e-21 105.1 85 57.6
CAN.G890.33 Capsicum annuum HOM05D007321 ORTHO05D009244 3.7e-21 104.8 72 65.3
Solyc02g083410.4 Solanum lycopersicum HOM05D007321 ORTHO05D009244 3.7e-21 104.8 85 57.6
Carub.0003s0867 Capsella rubella HOM05D007321 ORTHO05D009244 6.3e-21 104.0 85 58.8
SGA_v2.0_scaffold332G48942 Striga asiatica HOM05D007321 ORTHO05D009244 1.1e-20 103.2 72 65.3
Os07g0626800 Oryza sativa ssp. japonica HOM05D007321 ORTHO05D009244 1.4e-20 102.8 72 66.7
CSS0020188 Camellia sinensis var. sinensis HOM05D007321 ORTHO05D009244 2.4e-20 102.1 72 69.4
PGSC0003DMG400003660 Solanum tuberosum HOM05D007321 ORTHO05D009244 4.1e-20 101.3 72 63.9
Peaxi162Scf00328g00127 Petunia axillaris HOM05D007321 ORTHO05D009244 5.3e-20 100.9 85 56.5
SalBow5G3411 Salvia bowleyana HOM05D007321 ORTHO05D009244 6.9e-20 100.5 85 54.1
Ah.14g085390 Amaranthus hybridus HOM05D007321 ORTHO05D009244 1.2e-19 99.8 86 57.0
TPR.G10452 Trifolium pratense HOM05D007321 ORTHO05D009244 3.4e-19 98.2 72 58.3
Aa31LG3G2030 Aethionema arabicum HOM05D007321 ORTHO05D009244 7.6e-19 97.1 88 58.0
Zm00001eb328010 Zea mays HOM05D007321 ORTHO05D009244 1.0e-18 96.7 72 63.9
Pp3c2_19910 Physcomitrium patens HOM05D007321 ORTHO05D009244 3.8e-18 94.7 72 61.1
unitig_8.g3470 Utricularia gibba HOM05D007321 ORTHO05D009244 3.8e-18 94.7 84 54.8
ATR0580G200 Amborella trichopoda HOM05D007321 ORTHO05D009244 1.1e-17 93.2 72 61.1
Cre12.g560900 Chlamydomonas reinhardtii HOM05D007321 ORTHO05D009244 2.1e-16 89.0 70 58.6
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 3.0e-15 85.1 66 56.1
CBR_g49724 Chara braunii HOM05D007321 ORTHO05D009244 1.1e-14 83.2 72 55.6
SMO116G0156 Selaginella moellendorffii HOM05D007321 ORTHO05D009244 1.1e-12 76.6 85 44.7
MCO04G135 Micromonas commoda HOM05D007321 ORTHO05D009244 1.5e-11 72.8 78 46.2
AagrBONN_evm.TU.Sc2ySwM_344.1849 Anthoceros agrestis HOM05D007321 ORTHO05D009244 5.9e-11 70.9 69 49.3
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 5.7e-06 54.3 35 65.7


User provided reference genes

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