Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.6e-69 265.0 153 100.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.1e-45 186.0 150 68.0
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 7.5e-35 151.0 150 56.7
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 9.8e-35 150.6 150 55.3
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 2.3e-31 139.4 150 61.3
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 1.5e-30 136.7 151 55.6
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.5e-30 136.0 151 51.0
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 7.3e-30 134.4 155 52.3
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 7.3e-30 134.4 151 50.3
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 7.3e-30 134.4 148 52.7
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 4.7e-29 131.7 150 50.0
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.0e-28 130.6 151 51.0
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 3.1e-28 129.0 150 49.3
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 2.6e-27 125.9 150 46.7
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 4.4e-27 125.2 151 56.3
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 7.5e-27 124.4 150 48.0
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.7e-26 123.2 150 50.7
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 2.2e-26 122.9 147 47.6
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 2.9e-26 122.5 150 46.7
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 2.9e-26 122.5 148 56.1
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 8.3e-26 120.9 145 56.6
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 1.4e-25 120.2 150 45.3
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.4e-25 120.2 150 48.0
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 1.4e-25 120.2 149 49.7
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 4.1e-25 118.6 152 47.4
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 7.0e-25 117.9 153 51.0
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.0e-24 116.3 144 52.1
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 2.0e-24 116.3 149 49.7
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 2.0e-24 116.3 151 51.7
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 6.0e-24 114.8 150 43.3
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 2.3e-23 112.8 150 44.7
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 3.9e-23 112.1 158 45.6
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 5.0e-23 111.7 151 49.7
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 6.6e-23 111.3 151 48.3
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 1.1e-22 110.5 150 44.7
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 1.1e-22 110.5 151 49.0
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 1.1e-22 110.5 149 47.0
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.5e-22 110.2 150 51.3
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 1.5e-22 110.2 146 47.3
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.5e-22 109.4 152 45.4
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 2.5e-22 109.4 149 45.6
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 3.3e-22 109.0 147 54.4
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 3.3e-22 109.0 150 50.7
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 3.3e-22 109.0 149 45.6
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 4.3e-22 108.6 146 47.3
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 4.3e-22 108.6 152 53.9
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 4.3e-22 108.6 147 53.7
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.6e-22 108.2 147 51.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.2e-21 107.1 153 45.1
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.1e-21 106.3 150 50.0
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 2.1e-21 106.3 154 41.6
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 2.1e-21 106.3 149 50.3
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.7e-21 105.1 147 51.7
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 4.7e-21 105.1 150 46.0
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 8.1e-21 104.4 155 41.9
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 8.1e-21 104.4 153 42.5
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.8e-20 103.2 139 50.4
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.3e-20 102.8 147 53.7
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 2.3e-20 102.8 150 44.0
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 3.1e-20 102.4 137 42.3
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 3.1e-20 102.4 145 43.4
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 4.0e-20 102.1 156 41.7
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 5.2e-20 101.7 151 40.4
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 5.2e-20 101.7 154 41.6
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 5.2e-20 101.7 147 40.8
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 5.2e-20 101.7 146 45.9
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 1.2e-19 100.5 109 49.5
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 1.2e-19 100.5 153 39.9
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.2e-19 100.5 153 39.9
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 1.2e-19 100.5 151 50.3
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.5e-19 100.1 151 45.0
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.5e-19 100.1 150 42.7
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 2.6e-19 99.4 153 39.9
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 2.6e-19 99.4 150 42.0
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 3.4e-19 99.0 153 39.2
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 3.4e-19 99.0 145 40.0
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 4.4e-19 98.6 151 50.3
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 4.4e-19 98.6 153 47.1
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 5.8e-19 98.2 232 33.2
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 9.8e-19 97.4 113 58.4
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 9.8e-19 97.4 153 39.2
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.3e-18 97.1 154 40.9
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 1.7e-18 96.7 155 39.4
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.7e-18 96.7 90 52.2
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.7e-18 96.7 150 45.3
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 2.9e-18 95.9 152 42.8
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 2.9e-18 95.9 151 46.4
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.7e-18 95.5 139 48.9
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 4.9e-18 95.1 150 48.0
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 6.4e-18 94.7 148 40.5
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 4.1e-17 92.0 153 42.5
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 4.1e-17 92.0 147 43.5
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 5.4e-17 91.7 185 36.8
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 5.4e-17 91.7 164 42.7
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 5.4e-17 91.7 206 33.0
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 7.1e-17 91.3 150 38.7
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 3.5e-16 89.0 113 46.0
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.7e-15 86.7 150 38.0
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 4.3e-14 82.0 80 55.0
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 7.3e-14 81.3 160 35.6
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 7.3e-14 81.3 99 43.4
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.6e-11 72.8 162 38.9
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 6.4e-10 68.2 51 62.7
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.4e-09 65.1 98 50.0
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.7e-08 62.8 104 32.7
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.0e-08 61.6 48 58.3


User provided reference genes

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