Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1530 Trochodendron aralioides HOM05D006783 ORTHO05D008330 4.1e-110 401.4 198 100.0
TAR381G1481 Trochodendron aralioides HOM05D006783 ORTHO05D008330 6.2e-90 334.3 180 93.3
Nn5g28554 Nelumbo nucifera HOM05D006783 ORTHO05D008330 1.4e-38 163.7 175 53.7
Aqoxy5G02235 Aquilegia oxysepala HOM05D006783 ORTHO05D008330 3.3e-35 152.5 163 52.1
PSO017G1517 Papaver somniferum HOM05D006783 ORTHO05D008330 2.8e-34 149.4 188 51.1
PSO170G6811 Papaver somniferum HOM05D006783 ORTHO05D008330 2.4e-33 146.4 189 51.3
Rhsim10G0135000 Rhododendron simsii HOM05D006783 ORTHO05D008330 7.0e-33 144.8 184 48.9
Dinv24358 Davidia involucrata HOM05D006783 ORTHO05D008330 5.9e-32 141.7 181 49.2
vmacro12805 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 1.3e-31 140.6 183 46.4
Haze_25231 Corylus avellana HOM05D006783 ORTHO05D008330 2.2e-31 139.8 173 47.4
Hma1.2p1_0050F.1_g029140 Hydrangea macrophylla HOM05D006783 ORTHO05D008330 1.9e-30 136.7 183 43.7
Actinidia06622 Actinidia chinensis HOM05D006783 ORTHO05D008330 4.2e-30 135.6 180 45.0
Duzib264G0694 Durio zibethinus HOM05D006783 ORTHO05D008330 4.2e-30 135.6 180 47.8
QL10p043377 Quercus lobata HOM05D006783 ORTHO05D008330 4.2e-30 135.6 181 47.0
Atru.chr4.894 Acer truncatum HOM05D006783 ORTHO05D008330 3.6e-29 132.5 180 46.7
CiPaw.03G122200 Carya illinoinensis HOM05D006783 ORTHO05D008330 6.7e-28 128.3 181 45.9
COL.COLO4_35737 Corchorus olitorius HOM05D006783 ORTHO05D008330 6.7e-28 128.3 162 47.5
Gohir.D04G022400 Gossypium hirsutum HOM05D006783 ORTHO05D008330 1.1e-27 127.5 159 48.4
Gorai.012G034600 Gossypium raimondii HOM05D006783 ORTHO05D008330 1.1e-27 127.5 159 48.4
Dinv07124 Davidia involucrata HOM05D006783 ORTHO05D008330 2.6e-27 126.3 155 47.1
Gohir.A05G385200 Gossypium hirsutum HOM05D006783 ORTHO05D008330 7.5e-27 124.8 159 45.9
Thecc.01G131600 Theobroma cacao HOM05D006783 ORTHO05D008330 1.7e-26 123.6 163 45.4
Cpa.g.sc42.156 Carica papaya HOM05D006783 ORTHO05D008330 8.2e-26 121.3 160 45.0
FvH4_1g24320 Fragaria vesca HOM05D006783 ORTHO05D008330 1.1e-25 120.9 157 43.3
FAN19G0409 Fragaria x ananassa HOM05D006783 ORTHO05D008330 1.1e-25 120.9 157 43.3
Manes.12G155400 Manihot esculenta HOM05D006783 ORTHO05D008330 3.1e-25 119.4 185 44.9
TWI79G1521 Tripterygium wilfordii HOM05D006783 ORTHO05D008330 1.6e-24 117.1 185 42.2
FAN26G1994 Fragaria x ananassa HOM05D006783 ORTHO05D008330 2.7e-24 116.3 206 38.8
Potri.007G106700 Populus trichocarpa HOM05D006783 ORTHO05D008330 2.7e-24 116.3 183 42.1
Eucgr.H04963 Eucalyptus grandis HOM05D006783 ORTHO05D008330 3.5e-24 115.9 161 42.2
Ciclev10000624m.g Citrus clementina HOM05D006783 ORTHO05D008330 2.9e-23 112.8 161 46.0
Sabra07G0087300 Salix brachista HOM05D006783 ORTHO05D008330 5.0e-23 112.1 182 40.7
Cc07_g18470 Coffea canephora HOM05D006783 ORTHO05D008330 6.5e-23 111.7 176 39.8
DCAR_020443 Daucus carota HOM05D006783 ORTHO05D008330 6.5e-23 111.7 150 45.3
RcHm_v2.0_Chr2g0120831 Rosa chinensis HOM05D006783 ORTHO05D008330 8.5e-23 111.3 168 42.3
Oeu004243.1 Olea europaea HOM05D006783 ORTHO05D008330 7.2e-22 108.2 182 39.6
Lj4A842G81 Lonicera japonica HOM05D006783 ORTHO05D008330 4.7e-21 105.5 202 38.1
CANSAT01G2909 Cannabis sativa HOM05D006783 ORTHO05D008330 4.0e-20 102.4 168 40.5
AUR62003560 Chenopodium quinoa HOM05D006783 ORTHO05D008330 2.0e-19 100.1 146 43.8
AL1G31600 Arabidopsis lyrata HOM05D006783 ORTHO05D008330 5.7e-19 98.6 170 41.8
BcaC07g41275 Brassica carinata HOM05D006783 ORTHO05D008330 7.5e-19 98.2 133 45.9
C08p42820 Brassica napus HOM05D006783 ORTHO05D008330 7.5e-19 98.2 133 45.9
AT1G19025 Arabidopsis thaliana HOM05D006783 ORTHO05D008330 1.3e-18 97.4 130 45.4
BolC8t51838H Brassica oleracea HOM05D006783 ORTHO05D008330 1.3e-18 97.4 133 44.4
A09p59540 Brassica napus HOM05D006783 ORTHO05D008330 3.7e-18 95.9 130 42.3
BraA09t41331Z Brassica rapa HOM05D006783 ORTHO05D008330 3.7e-18 95.9 130 42.3
arahy.Tifrunner.gnm1.ann1.GA3CQQ Arachis hypogaea HOM05D006783 ORTHO05D008330 6.3e-18 95.1 139 45.3
GSVIVG01026486001 Vitis vinifera HOM05D006783 ORTHO05D008330 1.1e-17 94.4 180 37.8
Peaxi162Scf00183g00220 Petunia axillaris HOM05D006783 ORTHO05D008330 1.4e-17 94.0 164 39.0
Thhalv10007278m.g Eutrema salsugineum HOM05D006783 ORTHO05D008330 2.4e-17 93.2 157 41.4
arahy.Tifrunner.gnm1.ann1.NV8W9T Arachis hypogaea HOM05D006783 ORTHO05D008330 3.1e-17 92.8 139 43.9
BcaB03g12941 Brassica carinata HOM05D006783 ORTHO05D008330 3.1e-17 92.8 162 40.1
Carub.0001s1866 Capsella rubella HOM05D006783 ORTHO05D008330 4.1e-17 92.4 175 38.9
MELO3C023221.2 Cucumis melo HOM05D006783 ORTHO05D008330 4.1e-17 92.4 181 35.4
CARHR019650 Cardamine hirsuta HOM05D006783 ORTHO05D008330 5.4e-17 92.0 169 36.7
AUR62017874 Chenopodium quinoa HOM05D006783 ORTHO05D008330 5.4e-17 92.0 177 37.9
Sed0010062 Sechium edule HOM05D006783 ORTHO05D008330 5.4e-17 92.0 176 34.7
BcaB03g14467 Brassica carinata HOM05D006783 ORTHO05D008330 9.1e-17 91.3 162 38.3
Lalb_Chr11g0068431 Lupinus albus HOM05D006783 ORTHO05D008330 9.1e-17 91.3 135 43.0
Nitab4.5_0000856g0080 Nicotiana tabacum HOM05D006783 ORTHO05D008330 9.1e-17 91.3 184 34.8
Aa31LG7G3800 Aethionema arabicum HOM05D006783 ORTHO05D008330 1.6e-16 90.5 171 39.2
EL10Ac6g15310 Beta vulgaris HOM05D006783 ORTHO05D008330 2.0e-16 90.1 177 37.9
CsaV3_2G019520 Cucumis sativus L. HOM05D006783 ORTHO05D008330 2.0e-16 90.1 181 34.8
Lj1g0010780 Lotus japonicus HOM05D006783 ORTHO05D008330 2.0e-16 90.1 185 36.2
Sp1g16990 Schrenkiella parvula HOM05D006783 ORTHO05D008330 2.0e-16 90.1 157 40.1
Nitab4.5_0008132g0010 Nicotiana tabacum HOM05D006783 ORTHO05D008330 1.3e-15 87.4 147 38.1
Ca_16945_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.7e-15 87.0 173 37.0
Ca_16964_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.7e-15 87.0 173 37.0
Ah.03g147820 Amaranthus hybridus HOM05D006783 ORTHO05D008330 3.8e-15 85.9 143 40.6
Migut.H00705 Erythranthe guttata HOM05D006783 ORTHO05D008330 6.5e-15 85.1 183 34.4
Hund25583 Selenicereus undatus HOM05D006783 ORTHO05D008330 6.5e-15 85.1 128 43.8
Sopen11g001950 Solanum pennellii HOM05D006783 ORTHO05D008330 6.5e-15 85.1 171 36.8
ClCG02G000310 Citrullus lanatus HOM05D006783 ORTHO05D008330 8.5e-15 84.7 176 35.2
MSTRG.2651 Avicennia marina HOM05D006783 ORTHO05D008330 1.9e-14 83.6 170 41.8
Solyc11g006010.3 Solanum lycopersicum HOM05D006783 ORTHO05D008330 1.9e-14 83.6 171 36.3
HanXRQChr06g0180641 Helianthus annuus HOM05D006783 ORTHO05D008330 3.2e-14 82.8 146 37.7
THA.LOC104808567 Tarenaya hassleriana HOM05D006783 ORTHO05D008330 3.2e-14 82.8 181 34.8
CDE06G2516 Ceratophyllum demersum HOM05D006783 ORTHO05D008330 4.2e-14 82.4 177 37.3
Zm00001eb145740 Zea mays HOM05D006783 ORTHO05D008330 4.2e-14 82.4 153 36.6
Os01g0881400 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 2.7e-13 79.7 129 34.9
HPP92_013423 Vanilla planifolia HOM05D006783 ORTHO05D008330 3.6e-13 79.3 141 38.3
CAN.G582.7 Capsicum annuum HOM05D006783 ORTHO05D008330 6.1e-13 78.6 169 36.7
Medtr3g096240 Medicago truncatula HOM05D006783 ORTHO05D008330 6.1e-13 78.6 169 34.3
SHI11470 Sapria himalayana HOM05D006783 ORTHO05D008330 6.1e-13 78.6 159 36.5
Glyma.06G153300 Glycine max HOM05D006783 ORTHO05D008330 1.8e-12 77.0 137 38.7
Psat5g062360 Pisum sativum HOM05D006783 ORTHO05D008330 8.8e-12 74.7 172 32.6
TPR.G20746 Trifolium pratense HOM05D006783 ORTHO05D008330 8.8e-12 74.7 163 34.4
unitig_0.g1207 Utricularia gibba HOM05D006783 ORTHO05D008330 2.0e-11 73.6 152 36.8
Os08g0107600 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 4.4e-11 72.4 158 33.5
Lsat_1_v5_gn_2_37361 Lactuca sativa HOM05D006783 ORTHO05D008330 9.8e-11 71.2 139 36.0
ECA246G4425 Erigeron canadensis HOM05D006783 ORTHO05D008330 1.7e-10 70.5 175 29.7
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 2.2e-10 70.1 130 40.8
ATR1136G115 Amborella trichopoda HOM05D006783 ORTHO05D008330 7.0e-09 65.1 48 58.3
Psat7g194880 Pisum sativum HOM05D006783 ORTHO05D008330 7.0e-09 65.1 124 36.3
Zm00001eb174320 Zea mays HOM05D006783 ORTHO05D008330 3.5e-08 62.8 123 35.8
MBI06_g29674_MAGBIO Magnolia biondii HOM05D006783 ORTHO05D008330 8.6e-07 58.2 50 56.0


User provided reference genes

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