Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.1e-73 278.5 151 100.0
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 1.3e-50 203.4 149 75.2
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 4.0e-49 198.4 147 74.8
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 2.9e-47 192.2 149 71.8
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.1e-46 190.3 147 70.7
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 7.1e-46 187.6 145 71.0
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 3.9e-44 181.8 145 71.0
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 4.8e-42 174.9 146 70.5
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 8.2e-42 174.1 146 70.5
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 4.5e-40 168.3 148 64.2
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.7e-39 166.4 148 66.2
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 1.7e-39 166.4 146 67.1
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 5.5e-38 161.4 152 65.8
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 9.3e-38 160.6 143 60.8
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 2.7e-37 159.1 142 64.1
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 6.1e-37 157.9 146 64.4
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 1.3e-36 156.8 140 67.1
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 6.7e-36 154.5 141 61.0
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 8.7e-36 154.1 141 66.0
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 7.4e-35 151.0 106 77.4
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 2.2e-34 149.4 151 57.0
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.2e-34 149.4 151 57.0
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.2e-34 149.4 145 58.6
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 8.2e-34 147.5 146 61.0
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 8.2e-34 147.5 144 58.3
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.4e-33 146.7 143 60.8
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.8e-33 146.4 144 63.9
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.8e-33 146.4 145 57.9
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 3.1e-33 145.6 141 58.2
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 5.3e-33 144.8 146 61.6
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 5.3e-33 144.8 145 58.6
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 5.3e-33 144.8 146 62.3
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 2.0e-32 142.9 141 56.7
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 7.7e-32 141.0 143 57.3
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.0e-31 140.6 144 61.1
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.3e-31 140.2 151 55.6
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 1.7e-31 139.8 148 59.5
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 2.2e-31 139.4 134 61.9
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.1e-30 137.1 141 55.3
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.4e-30 136.7 144 57.6
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.9e-30 136.3 144 56.9
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.9e-30 136.3 145 57.2
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.9e-30 136.3 141 59.6
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 4.2e-30 135.2 137 62.0
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 5.5e-30 134.8 147 53.7
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 5.5e-30 134.8 144 56.9
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 7.2e-30 134.4 143 61.5
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 9.4e-30 134.0 145 55.9
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 2.1e-29 132.9 144 56.9
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 3.6e-29 132.1 136 56.6
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 7.9e-29 131.0 93 78.5
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 2.3e-28 129.4 146 57.5
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 2.3e-28 129.4 147 53.7
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.0e-28 129.0 144 57.6
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 6.7e-28 127.9 139 57.6
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 1.1e-27 127.1 140 59.3
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.5e-27 126.7 145 54.5
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 2.0e-27 126.3 145 54.5
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 7.4e-27 124.4 144 52.8
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 7.4e-27 124.4 136 54.4
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.7e-26 123.2 88 78.4
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 1.7e-26 123.2 145 53.8
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.8e-26 121.7 146 52.1
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 8.2e-26 120.9 151 49.0
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.1e-25 120.6 148 54.7
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.2e-24 117.1 146 50.7
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.5e-24 116.7 145 49.0
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 7.7e-24 114.4 148 52.0
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 1.0e-23 114.0 145 50.3
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 2.9e-23 112.5 143 52.4
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.9e-23 112.5 136 50.0
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.9e-23 112.5 149 50.3
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 3.8e-23 112.1 145 49.7
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 6.5e-23 111.3 145 53.8
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 8.5e-23 110.9 142 49.3
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 2.5e-22 109.4 140 50.7
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 3.2e-22 109.0 141 49.6
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 4.2e-22 108.6 140 50.0
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 1.6e-21 106.7 140 49.3
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 2.7e-21 105.9 145 47.6
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 7.9e-21 104.4 141 47.5
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.3e-20 102.8 145 47.6
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.1e-19 100.5 147 46.3
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.4e-19 97.8 148 46.6
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 7.4e-19 97.8 86 67.4
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 9.7e-19 97.4 139 47.5
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.3e-18 97.1 125 48.8
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.3e-18 97.1 145 45.5
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 2.2e-18 96.3 65 73.8
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 6.3e-18 94.7 146 44.5
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 6.3e-18 94.7 145 46.2
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 8.2e-18 94.4 100 60.0
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 9.1e-17 90.9 144 43.8
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.2e-16 90.5 97 57.7
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 3.5e-16 89.0 146 42.5
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 7.2e-14 81.3 143 42.7
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 8.0e-13 77.8 131 43.5
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 2.6e-11 72.8 141 39.0
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 3.3e-11 72.4 145 42.1
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.3e-10 70.5 134 43.3
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 1.4e-09 67.0 104 45.2
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 2.4e-09 66.2 52 67.3
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 5.3e-09 65.1 116 41.4
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 1.2e-08 63.9 73 56.2
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 1.0e-07 60.8 118 41.5
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 2.2e-07 59.7 125 38.4
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 3.8e-07 58.9 97 45.4
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 3.8e-07 58.9 119 37.0
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 1.9e-06 56.6 147 33.3
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 9.4e-06 54.3 147 33.3


User provided reference genes

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