Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1488 Trochodendron aralioides HOM05D012309 ORTHO05D014791 6.6e-27 123.2 60 100.0
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 6.4e-22 106.7 54 96.3
Nitab4.5_0020169g0010 Nicotiana tabacum HOM05D012309 ORTHO05D014791 7.8e-20 99.8 54 90.7
CAN.G1126.3 Capsicum annuum HOM05D012309 ORTHO05D014791 6.6e-19 96.7 54 87.0
CAN.G1321.12 Capsicum annuum HOM05D012309 ORTHO05D014791 1.5e-18 95.5 54 85.2
CAN.G72.15 Capsicum annuum HOM05D012309 ORTHO05D014791 3.3e-18 94.4 54 85.2
CAN.G502.13 Capsicum annuum HOM05D012309 ORTHO05D014791 2.1e-17 91.7 54 83.3
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 3.6e-17 90.9 54 83.3
Sopen06g007660 Solanum pennellii HOM05D008609 ORTHO05D014791 1.4e-16 89.0 54 83.3
ATR0661G063 Amborella trichopoda HOM05D012309 ORTHO05D014791 2.0e-15 85.1 51 80.4
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.6e-15 84.7 48 85.4
Lj2C1229G13 Lonicera japonica HOM05D012309 ORTHO05D014791 9.8e-15 82.8 38 100.0
CAN.G72.9 Capsicum annuum HOM05D012309 ORTHO05D014791 2.9e-14 81.3 54 75.9
CAN.G108.65 Capsicum annuum HOM05D012309 ORTHO05D014791 5.4e-13 77.0 52 73.1
CsaV3_UNG208180 Cucumis sativus L. HOM05D012309 ORTHO05D020467 4.6e-12 73.9 40 85.0
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 4.6e-12 73.9 44 79.5
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.0e-11 71.2 50 68.0
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 5.1e-11 70.5 36 94.4
Nitab4.5_0001152g0380 Nicotiana tabacum HOM05D012309 ORTHO05D011202 4.3e-10 67.4 40 82.5
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.5e-07 58.9 26 100.0
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 2.9e-06 54.7 26 92.3


User provided reference genes

Program Settings