Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1423 Trochodendron aralioides HOM05D005065 ORTHO05D005944 6.4e-23 109.8 51 100.0
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 9.2e-14 79.3 50 72.0
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 1.3e-12 75.5 51 72.5
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 7.3e-11 69.7 50 64.0
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 7.3e-11 69.7 49 63.3
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 2.1e-10 68.2 51 64.7
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.8e-10 67.8 53 66.0
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 1.8e-09 65.1 57 59.6
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.4e-09 64.7 53 60.4
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 3.1e-09 64.3 54 59.3
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 4.0e-09 63.9 53 62.3
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 1.2e-08 62.4 51 60.8
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 1.5e-08 62.0 50 62.0
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 2.0e-08 61.6 50 62.0
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 2.6e-08 61.2 53 56.6
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 2.6e-08 61.2 52 59.6
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 3.4e-08 60.8 50 58.0
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 3.4e-08 60.8 54 57.4
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 4.4e-08 60.5 52 57.7
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 5.8e-08 60.1 59 50.8
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 7.6e-08 59.7 52 59.6
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 7.6e-08 59.7 51 54.9
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 7.6e-08 59.7 61 50.8
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 9.9e-08 59.3 53 54.7
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 9.9e-08 59.3 53 54.7
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.3e-07 58.9 50 58.0
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 1.7e-07 58.5 52 59.6
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 2.9e-07 57.8 53 58.5
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 2.9e-07 57.8 52 55.8
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 2.9e-07 57.8 58 50.0
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 3.8e-07 57.4 52 53.8
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 4.9e-07 57.0 53 52.8
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.9e-07 57.0 53 52.8
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 4.9e-07 57.0 62 48.4
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 4.9e-07 57.0 62 48.4
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 6.4e-07 56.6 50 54.0
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 8.4e-07 56.2 55 50.9
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 8.4e-07 56.2 56 53.6
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 1.1e-06 55.8 55 56.4
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-06 55.8 49 57.1
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 1.4e-06 55.5 52 51.9
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.4e-06 55.5 54 55.6
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.9e-06 55.1 53 50.9
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 1.9e-06 55.1 52 57.7
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.9e-06 55.1 51 56.9
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 1.9e-06 55.1 49 51.0
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 2.4e-06 54.7 41 61.0
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 3.2e-06 54.3 63 54.0
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 4.2e-06 53.9 57 49.1
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 4.2e-06 53.9 59 54.2
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 4.2e-06 53.9 53 58.5
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 4.2e-06 53.9 51 52.9
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 5.4e-06 53.5 62 46.8
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 5.4e-06 53.5 49 51.0
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 5.4e-06 53.5 51 54.9
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 5.4e-06 53.5 53 56.6
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 5.4e-06 53.5 53 56.6
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 7.1e-06 53.1 55 54.5
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 9.3e-06 52.8 51 56.9
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 9.3e-06 52.8 58 48.3


User provided reference genes

Program Settings