Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.7e-117 424.9 209 100.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.0e-103 380.2 205 89.8
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 6.5e-98 360.9 209 82.8
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.1e-97 360.1 209 82.8
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.5e-97 359.8 208 81.2
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.1e-96 355.9 209 82.3
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.7e-96 355.5 208 82.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.1e-96 354.4 209 80.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 6.1e-96 354.4 209 81.3
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 5.2e-95 351.3 209 80.9
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.2e-94 350.1 203 82.8
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-94 349.7 209 80.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.0e-94 349.4 209 80.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 9.7e-94 347.1 207 81.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 3.7e-93 345.1 209 80.4
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.7e-93 345.1 207 79.7
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.7e-93 345.1 206 80.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 6.3e-93 344.4 207 79.7
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 6.3e-93 344.4 206 80.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.4e-92 343.2 204 79.9
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.8e-92 342.8 207 80.2
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 5.3e-92 341.3 203 79.8
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 7.0e-92 340.9 209 78.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.5e-91 338.2 204 78.4
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 4.5e-91 338.2 205 78.0
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.0e-90 337.0 181 90.6
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.2e-90 335.9 198 80.3
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.2e-90 335.9 203 80.8
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.8e-90 335.1 209 78.0
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 3.8e-90 335.1 205 79.5
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.5e-89 332.4 205 77.6
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.2e-89 331.6 207 77.3
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.6e-88 328.6 206 76.7
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 3.0e-87 325.5 206 75.7
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 5.2e-87 324.7 205 73.2
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.8e-87 323.9 203 75.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 8.8e-87 323.9 206 75.2
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.2e-86 323.6 203 75.4
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.5e-86 323.2 204 77.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.0e-86 322.8 206 72.3
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 2.0e-86 322.8 206 74.3
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 2.6e-86 322.4 206 76.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 3.4e-86 322.0 206 71.4
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.4e-86 321.6 205 73.2
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 5.7e-86 321.2 207 72.9
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 9.8e-86 320.5 205 72.2
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 9.8e-86 320.5 207 72.9
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.8e-86 320.5 203 75.9
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.3e-85 320.1 205 74.1
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.3e-85 320.1 208 73.1
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.7e-85 319.7 209 73.7
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 8.3e-85 317.4 206 70.9
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.1e-84 317.0 203 74.9
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.4e-84 315.8 203 73.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.1e-84 315.5 209 74.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.1e-84 315.5 205 72.2
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 5.4e-84 314.7 203 73.9
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 5.4e-84 314.7 203 74.4
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 9.1e-84 313.9 207 72.0
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.0e-83 312.8 205 70.2
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 5.9e-83 311.2 209 74.6
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.0e-82 310.5 207 68.6
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.3e-82 310.1 207 68.6
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.3e-82 310.1 198 75.3
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.7e-82 309.7 209 72.2
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 5.0e-82 308.1 203 73.4
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.5e-81 306.6 205 73.2
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.9e-81 306.2 205 70.2
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.5e-81 303.9 208 70.7
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-80 303.1 204 71.1
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.8e-80 302.4 205 72.2
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.8e-80 302.4 202 71.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 4.7e-80 301.6 203 71.9
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.7e-80 301.6 203 71.9
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.7e-80 301.6 203 71.9
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 6.1e-80 301.2 203 71.9
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.0e-79 300.4 205 70.2
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.3e-79 299.3 203 71.4
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.3e-79 299.3 203 71.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.0e-79 298.9 203 71.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.4e-78 295.4 208 72.1
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 4.4e-78 295.0 206 68.4
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.8e-76 289.7 200 71.0
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 5.4e-76 288.1 204 68.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.4e-76 288.1 206 68.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 5.4e-76 288.1 207 66.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.2e-75 287.0 209 67.5
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.7e-75 285.8 207 70.5
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.3e-74 282.7 203 68.5
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.5e-73 279.3 205 67.3
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.6e-72 276.6 163 81.0
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-68 263.1 188 70.2
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 3.2e-68 262.3 203 63.1
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 9.2e-68 260.8 146 83.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.3e-65 252.3 163 71.8
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 4.3e-65 251.9 177 66.7
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.4e-60 235.0 132 81.8
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.9e-57 226.5 205 57.6
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.7e-56 221.9 157 68.8
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 7.1e-52 208.0 167 63.5
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 8.6e-50 201.1 205 53.2
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.2e-46 190.7 202 50.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.3e-45 187.2 202 50.0
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.5e-41 173.7 92 84.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.5e-41 172.9 129 68.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.4e-36 157.1 199 45.7
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 4.5e-30 135.6 84 77.4
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 7.6e-30 134.8 116 61.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.8e-22 108.6 72 72.2
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.7e-21 107.1 81 64.2
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 9.0e-07 58.2 106 38.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.6e-06 56.6 42 57.1
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 7.7e-06 55.1 109 32.1


User provided reference genes

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