Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1353 Trochodendron aralioides HOM05D003138 ORTHO05D030444 6.8e-84 313.9 155 100.0
TAR625G1113 Trochodendron aralioides HOM05D003138 ORTHO05D003789 9.7e-14 80.9 110 46.4
TAR381G0750 Trochodendron aralioides HOM05D003138 ORTHO05D003789 2.4e-12 76.3 74 56.8
TAR381G1576 Trochodendron aralioides HOM05D003138 ORTHO05D003789 2.4e-12 76.3 74 56.8
GSVIVG01002665001 Vitis vinifera HOM05D003138 ORTHO05D003789 1.5e-11 73.6 74 55.4
PGR102G1221 Punica granatum HOM05D003138 ORTHO05D003789 2.0e-11 73.2 58 62.1
GSVIVG01002279001 Vitis vinifera HOM05D003138 ORTHO05D003789 7.7e-11 71.2 74 54.1
CDE07G0037 Ceratophyllum demersum HOM05D003138 ORTHO05D003789 2.9e-10 69.3 53 58.5
MSTRG.15346 Avicennia marina HOM05D003138 ORTHO05D003789 5.0e-10 68.6 84 47.6
Hma1.2p1_0808F.1_g221660 Hydrangea macrophylla HOM05D003138 ORTHO05D003789 6.5e-10 68.2 119 42.9
TWI23G0805 Tripterygium wilfordii HOM05D003138 ORTHO05D003789 6.5e-10 68.2 68 52.9
SEGI_00155 Sequoiadendron giganteum HOM05D003138 ORTHO05D015041 1.1e-09 67.4 44 65.9
Lalb_Chr16g0378911 Lupinus albus HOM05D003138 ORTHO05D003789 1.4e-09 67.0 71 50.7
Potri.014G005000 Populus trichocarpa HOM05D003138 ORTHO05D003789 1.4e-09 67.0 58 56.9
ClCG01G017650 Citrullus lanatus HOM05D003138 ORTHO05D003789 1.9e-09 66.6 95 41.1
Eucgr.B01669 Eucalyptus grandis HOM05D003138 ORTHO05D003789 1.9e-09 66.6 64 51.6
Hma1.2p1_0852F.1_g228610 Hydrangea macrophylla HOM05D003138 ORTHO05D003789 2.5e-09 66.2 55 56.4
RcHm_v2.0_Chr1g0384171 Rosa chinensis HOM05D003138 ORTHO05D003789 2.5e-09 66.2 53 60.4
RcHm_v2.0_Chr2g0108261 Rosa chinensis HOM05D003138 ORTHO05D003789 2.5e-09 66.2 53 60.4
Sed0009166 Sechium edule HOM05D003138 ORTHO05D003789 2.5e-09 66.2 96 42.7
SEGI_18329 Sequoiadendron giganteum HOM05D003138 ORTHO05D003789 2.5e-09 66.2 43 65.1
FAN19G1177 Fragaria x ananassa HOM05D003138 ORTHO05D003789 3.2e-09 65.9 60 56.7
Hund13955 Selenicereus undatus HOM05D003138 ORTHO05D003789 3.2e-09 65.9 50 64.0
Manes.12G115300 Manihot esculenta HOM05D003138 ORTHO05D003789 4.2e-09 65.5 74 45.9
SHI29452 Sapria himalayana HOM05D003138 ORTHO05D003789 4.2e-09 65.5 45 62.2
HPP92_018181 Vanilla planifolia HOM05D003138 ORTHO05D003789 4.2e-09 65.5 48 62.5
ATR0739G017 Amborella trichopoda HOM05D003138 ORTHO05D003789 5.5e-09 65.1 39 69.2
Gohir.A10G089500 Gossypium hirsutum HOM05D003138 ORTHO05D003789 5.5e-09 65.1 49 61.2
Gohir.D10G098600 Gossypium hirsutum HOM05D003138 ORTHO05D003789 5.5e-09 65.1 49 61.2
Gorai.011G108300 Gossypium raimondii HOM05D003138 ORTHO05D003789 5.5e-09 65.1 42 66.7
FvH4_1g17820 Fragaria vesca HOM05D003138 ORTHO05D003789 7.2e-09 64.7 53 60.4
Lj7A107G21 Lonicera japonica HOM05D003138 ORTHO05D003789 7.2e-09 64.7 71 49.3
Haze_15275 Corylus avellana HOM05D003138 ORTHO05D003789 9.4e-09 64.3 71 49.3
FAN26G0633 Fragaria x ananassa HOM05D003138 ORTHO05D003789 9.4e-09 64.3 53 60.4
Lj7A106T18 Lonicera japonica HOM05D003138 ORTHO05D003789 9.4e-09 64.3 102 42.2
SGA_v2.0_scaffold15G07466 Striga asiatica HOM05D003138 ORTHO05D003789 9.4e-09 64.3 50 58.0
Ca_24681_v3 Cicer arietinum L. HOM05D003138 ORTHO05D003789 1.2e-08 63.9 76 44.7
Lalb_Chr09g0323651 Lupinus albus HOM05D003138 ORTHO05D003789 1.2e-08 63.9 62 51.6
Gohir.D03G029200 Gossypium hirsutum HOM05D003138 ORTHO05D003789 1.6e-08 63.5 42 64.3
PSO541G1195 Papaver somniferum HOM05D003138 ORTHO05D003789 1.6e-08 63.5 67 55.2
PSO675G5167 Papaver somniferum HOM05D003138 ORTHO05D003789 1.6e-08 63.5 67 55.2
Dinv04041 Davidia involucrata HOM05D003138 ORTHO05D003789 2.1e-08 63.2 42 66.7
Oeu017637.1 Olea europaea HOM05D003138 ORTHO05D003789 2.1e-08 63.2 56 55.4
Rhsim08G0093000 Rhododendron simsii HOM05D003138 ORTHO05D003789 2.1e-08 63.2 104 41.3
Lj4C163T19 Lonicera japonica HOM05D003138 ORTHO05D003789 2.7e-08 62.8 75 48.0
MD02G1187100 Malus domestica HOM05D003138 ORTHO05D003789 2.7e-08 62.8 73 46.6
Sed0018224 Sechium edule HOM05D003138 ORTHO05D003789 2.7e-08 62.8 50 56.0
CSS0031065 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 3.6e-08 62.4 58 50.0
Nn5g30613 Nelumbo nucifera HOM05D003138 ORTHO05D003789 3.6e-08 62.4 93 39.8
Oeu014252.1 Olea europaea HOM05D003138 ORTHO05D003789 3.6e-08 62.4 55 58.2
VMungo0251G0604 Vigna mungo HOM05D003138 ORTHO05D015041 3.6e-08 62.4 51 56.9
C07p62550 Brassica napus HOM05D003138 ORTHO05D003789 4.6e-08 62.0 120 35.8
Migut.H00341 Erythranthe guttata HOM05D003138 ORTHO05D003789 4.6e-08 62.0 59 55.9
CARHR246040 Cardamine hirsuta HOM05D003138 ORTHO05D003789 6.1e-08 61.6 55 54.5
Gorai.007G224300 Gossypium raimondii HOM05D003138 ORTHO05D003789 6.1e-08 61.6 49 59.2
THA.LOC104804210 Tarenaya hassleriana HOM05D003138 ORTHO05D003789 6.1e-08 61.6 61 49.2
arahy.Tifrunner.gnm1.ann1.U6I4YS Arachis hypogaea HOM05D003138 ORTHO05D003789 7.9e-08 61.2 71 47.9
A01p01350 Brassica napus HOM05D003138 ORTHO05D003789 7.9e-08 61.2 42 61.9
BraA01t00131Z Brassica rapa HOM05D003138 ORTHO05D003789 7.9e-08 61.2 42 61.9
Eucgr.F03530 Eucalyptus grandis HOM05D003138 ORTHO05D003789 7.9e-08 61.2 70 42.9
Gohir.A11G214300 Gossypium hirsutum HOM05D003138 ORTHO05D003789 7.9e-08 61.2 65 50.8
Lalb_Chr05g0213741 Lupinus albus HOM05D003138 ORTHO05D003789 7.9e-08 61.2 49 55.1
Nitab4.5_0004242g0020 Nicotiana tabacum HOM05D003138 ORTHO05D003789 7.9e-08 61.2 66 45.5
PGSC0003DMG400009061 Solanum tuberosum HOM05D003138 ORTHO05D003789 7.9e-08 61.2 75 48.0
Duzib264G1098 Durio zibethinus HOM05D003138 ORTHO05D003789 1.0e-07 60.8 41 65.9
Nitab4.5_0000142g0190 Nicotiana tabacum HOM05D003138 ORTHO05D003789 1.0e-07 60.8 56 51.8
C01p01500 Brassica napus HOM05D003138 ORTHO05D003789 1.4e-07 60.5 57 54.4
BolC1t00147H Brassica oleracea HOM05D003138 ORTHO05D003789 1.4e-07 60.5 57 54.4
Thhalv10024840m.g Eutrema salsugineum HOM05D003138 ORTHO05D003789 1.4e-07 60.5 42 59.5
Psat2g171720 Pisum sativum HOM05D003138 ORTHO05D003789 1.4e-07 60.5 76 44.7
vmacro18022 Vaccinium macrocarpon HOM05D003138 ORTHO05D003789 1.4e-07 60.5 59 50.8
Thhalv10000095m.g Eutrema salsugineum HOM05D003138 ORTHO05D003789 1.8e-07 60.1 42 59.5
Solyc02g092260.3 Solanum lycopersicum HOM05D003138 ORTHO05D003789 1.8e-07 60.1 73 47.9
Sopen02g036840 Solanum pennellii HOM05D003138 ORTHO05D003789 1.8e-07 60.1 73 47.9
PGSC0003DMG400021414 Solanum tuberosum HOM05D003138 ORTHO05D003789 1.8e-07 60.1 73 47.9
BolC7t46670H Brassica oleracea HOM05D003138 ORTHO05D003789 2.3e-07 59.7 120 35.0
Carub.0004s0206 Capsella rubella HOM05D003138 ORTHO05D003789 2.3e-07 59.7 42 54.8
Carub.0007s0260 Capsella rubella HOM05D003138 ORTHO05D003789 2.3e-07 59.7 57 52.6
CDE04G3372 Ceratophyllum demersum HOM05D003138 ORTHO05D003789 2.3e-07 59.7 45 60.0
Medtr5g015300 Medicago truncatula HOM05D003138 ORTHO05D003789 2.3e-07 59.7 49 57.1
Glyma.01G194700 Glycine max HOM05D003138 ORTHO05D003789 3.0e-07 59.3 65 47.7
FvH4_7g16533 Fragaria vesca HOM05D003138 ORTHO05D003789 3.9e-07 58.9 53 56.6
Lj4g0008440 Lotus japonicus HOM05D003138 ORTHO05D003789 3.9e-07 58.9 43 58.1
Prupe.1G259000 Prunus persica HOM05D003138 ORTHO05D003789 3.9e-07 58.9 53 50.9
CAN.G278.17 Capsicum annuum HOM05D003138 ORTHO05D003789 5.1e-07 58.5 65 49.2
FAN06G0169 Fragaria x ananassa HOM05D003138 ORTHO05D003789 5.1e-07 58.5 53 54.7
Solyc03g043950.4 Solanum lycopersicum HOM05D003138 ORTHO05D003789 5.1e-07 58.5 75 46.7
BcaNung02073 Brassica carinata HOM05D003138 ORTHO05D003789 6.7e-07 58.2 120 34.2
MD15G1298200 Malus domestica HOM05D003138 ORTHO05D003789 6.7e-07 58.2 78 43.6
Aqoxy6G02588 Aquilegia oxysepala HOM05D003138 ORTHO05D003789 8.8e-07 57.8 59 54.2
CiPaw.01G003700 Carya illinoinensis HOM05D003138 ORTHO05D003789 8.8e-07 57.8 58 56.9
Oeu013326.4 Olea europaea HOM05D003138 ORTHO05D003789 8.8e-07 57.8 48 56.2
Sp7g35320 Schrenkiella parvula HOM05D003138 ORTHO05D003789 8.8e-07 57.8 57 49.1
AL4G12540 Arabidopsis lyrata HOM05D003138 ORTHO05D003789 1.1e-06 57.4 42 52.4
AT2G22910 Arabidopsis thaliana HOM05D003138 ORTHO05D003789 1.1e-06 57.4 42 52.4
arahy.Tifrunner.gnm1.ann1.GP9GZC Arachis hypogaea HOM05D003138 ORTHO05D003789 1.1e-06 57.4 89 40.4
PGR004G0610 Punica granatum HOM05D003138 ORTHO05D003789 1.1e-06 57.4 43 65.1
BcaNung02076 Brassica carinata HOM05D003138 ORTHO05D003789 1.5e-06 57.0 62 48.4
BcaNung02080 Brassica carinata HOM05D003138 ORTHO05D003789 1.5e-06 57.0 62 48.4
A03p65450 Brassica napus HOM05D003138 ORTHO05D003789 2.0e-06 56.6 56 50.0
BraA03t15597Z Brassica rapa HOM05D003138 ORTHO05D003789 2.0e-06 56.6 56 50.0
Dinv26939 Davidia involucrata HOM05D003138 ORTHO05D003789 2.5e-06 56.2 118 39.0
AT4G37670 Arabidopsis thaliana HOM05D003138 ORTHO05D003789 3.3e-06 55.8 42 57.1
ECA238G1545 Erigeron canadensis HOM05D003138 ORTHO05D003789 3.3e-06 55.8 68 45.6
Os07g0585600 Oryza sativa ssp. japonica HOM05D003138 ORTHO05D003789 3.3e-06 55.8 63 49.2
Potri.007G005300 Populus trichocarpa HOM05D003138 ORTHO05D003789 3.3e-06 55.8 42 57.1
Peaxi162Scf00118g01811 Petunia axillaris HOM05D003138 ORTHO05D030444 4.3e-06 55.5 67 43.3
Sp4g01950 Schrenkiella parvula HOM05D003138 ORTHO05D003789 4.3e-06 55.5 42 54.8
Sabra07G0003800 Salix brachista HOM05D003138 ORTHO05D003789 5.7e-06 55.1 46 56.5
Gohir.D11G209100 Gossypium hirsutum HOM05D003138 ORTHO05D003789 7.4e-06 54.7 61 47.5
HanXRQChr14g0445291 Helianthus annuus HOM05D003138 ORTHO05D003789 9.7e-06 54.3 78 43.6
SalBow5G4243 Salvia bowleyana HOM05D003138 ORTHO05D003789 9.7e-06 54.3 47 55.3


User provided reference genes

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