Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1343 Trochodendron aralioides HOM05D005482 ORTHO05D006502 2.7e-161 572.0 300 100.0
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 2.8e-86 322.8 269 72.9
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 6.5e-75 285.0 277 62.1
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 1.4e-64 250.8 277 59.9
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 9.5e-58 228.0 269 56.1
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 5.7e-55 218.8 276 51.8
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 1.3e-54 217.6 272 53.3
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 3.2e-53 213.0 277 50.5
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 7.0e-53 211.8 275 51.3
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 2.0e-52 210.3 279 50.5
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 6.6e-51 205.3 278 50.0
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 1.9e-50 203.8 309 49.5
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 5.6e-50 202.2 276 51.4
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 1.2e-49 201.1 292 51.0
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 2.1e-49 200.3 276 50.4
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 1.0e-48 198.0 280 47.1
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 3.1e-48 196.4 274 48.9
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 3.1e-48 196.4 274 48.9
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 6.8e-48 195.3 311 46.9
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 8.9e-48 194.9 274 48.5
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 1.2e-47 194.5 277 50.9
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 3.4e-47 193.0 285 46.3
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 4.4e-47 192.6 280 47.9
Actinidia24562 Actinidia chinensis HOM05D005482 ORTHO05D006502 9.8e-47 191.4 280 48.9
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 4.9e-46 189.1 277 48.0
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 6.4e-46 188.7 275 49.1
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 2.4e-45 186.8 288 45.1
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 7.0e-45 185.3 304 43.8
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 2.0e-44 183.7 276 47.8
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 3.0e-43 179.9 283 45.6
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 5.0e-43 179.1 273 48.7
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.9e-42 177.2 289 43.9
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.5e-42 176.8 287 45.3
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 3.3e-42 176.4 287 45.6
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 4.3e-42 176.0 278 48.2
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 2.1e-41 173.7 276 47.1
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 3.6e-41 172.9 280 44.3
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 3.6e-41 172.9 279 47.0
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 8.1e-41 171.8 279 44.1
TAR375G0200 Trochodendron aralioides HOM05D005482 ORTHO05D006502 8.1e-41 171.8 90 98.9
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 2.3e-40 170.2 286 47.2
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 3.1e-40 169.9 286 46.2
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 7.5e-39 165.2 291 44.3
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 1.3e-38 164.5 285 44.6
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 4.9e-38 162.5 275 44.7
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 7.1e-37 158.7 285 43.9
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 1.2e-36 157.9 288 42.7
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 1.2e-36 157.9 284 42.6
GSVIVG01002660001 Vitis vinifera HOM05D005482 ORTHO05D006502 3.5e-36 156.4 168 58.3
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 6.0e-36 155.6 282 43.3
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 2.3e-35 153.7 351 36.8
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 6.6e-35 152.1 291 42.3
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 1.9e-34 150.6 331 36.6
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 1.9e-34 150.6 331 36.6
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 3.3e-34 149.8 282 43.3
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 3.3e-34 149.8 279 40.5
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 1.2e-33 147.9 287 42.2
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 2.8e-33 146.7 289 39.4
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 3.6e-33 146.4 307 40.4
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 6.2e-33 145.6 271 42.8
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 1.8e-32 144.1 275 42.9
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 1.8e-32 144.1 285 41.8
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 3.1e-32 143.3 296 39.9
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 4.0e-32 142.9 276 41.3
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 8.9e-32 141.7 274 39.4
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 1.2e-31 141.4 276 39.1
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 1.2e-31 141.4 292 39.7
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 3.4e-31 139.8 376 35.4
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 3.4e-31 139.8 376 35.4
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 1.7e-30 137.5 266 39.5
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 3.8e-30 136.3 279 40.1
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 1.4e-29 134.4 286 38.5
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 2.4e-29 133.7 280 40.4
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 3.2e-29 133.3 282 40.4
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 3.2e-29 133.3 278 40.3
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 7.1e-29 132.1 288 36.1
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 7.1e-29 132.1 281 39.9
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 7.1e-29 132.1 309 38.2
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 9.2e-29 131.7 279 39.4
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 1.6e-28 131.0 279 38.7
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 2.7e-28 130.2 264 40.2
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 3.5e-28 129.8 288 35.8
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 7.8e-28 128.6 344 34.0
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 7.8e-28 128.6 312 33.7
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 8.6e-27 125.2 279 39.4
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 7.3e-26 122.1 306 38.2
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 2.1e-25 120.6 271 36.5
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 2.1e-25 120.6 305 34.1
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 2.8e-25 120.2 295 35.9
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 8.1e-25 118.6 288 36.5
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 8.1e-25 118.6 288 36.5
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 4.0e-24 116.3 326 32.8
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 3.4e-23 113.2 291 36.4
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 3.4e-23 113.2 291 36.4
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 3.8e-22 109.8 292 34.6
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 8.4e-22 108.6 302 35.4
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 1.4e-21 107.8 308 33.4
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 2.7e-20 103.6 307 35.8
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 1.0e-19 101.7 148 48.0
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 7.3e-18 95.5 174 40.8
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 1.8e-16 90.9 291 34.7
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 6.9e-16 89.0 243 35.8
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 4.5e-15 86.3 273 33.0
Oeu017110.1 Olea europaea HOM05D005482 ORTHO05D006502 5.8e-15 85.9 106 50.0
Actinidia28819 Actinidia chinensis HOM05D000138 ORTHO05D000078 7.6e-15 85.5 225 35.6
ECA246G4867 Erigeron canadensis HOM05D005482 ORTHO05D006502 2.9e-14 83.6 97 52.6
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 4.9e-14 82.8 236 34.3
ATR0767G089 Amborella trichopoda HOM05D005482 ORTHO05D006502 1.6e-12 77.8 68 54.4
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 3.9e-11 73.2 71 59.2
BolC3t18285H Brassica oleracea HOM05D005482 ORTHO05D006502 6.7e-11 72.4 141 39.0
C03p60240 Brassica napus HOM05D005482 ORTHO05D006502 9.6e-10 68.6 195 32.3
CDE07G1566 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 4.8e-09 66.2 108 44.4
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 4.8e-09 66.2 169 34.9
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.7e-06 57.8 54 59.3


User provided reference genes

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