Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1307 Trochodendron aralioides HOM05D002788 ORTHO05D003199 8.8e-34 146.4 73 100.0
TAR625G0979 Trochodendron aralioides HOM05D002788 ORTHO05D003199 1.6e-27 125.6 71 87.3
GSVIVG01000215001 Vitis vinifera HOM05D002788 ORTHO05D003199 9.8e-25 116.3 71 81.7
Actinidia36459 Actinidia chinensis HOM05D002788 ORTHO05D003199 2.5e-20 101.7 71 74.6
Actinidia12014 Actinidia chinensis HOM05D002788 ORTHO05D003199 3.3e-20 101.3 73 74.0
MD02G1179200 Malus domestica HOM05D002788 ORTHO05D003199 3.3e-20 101.3 71 70.4
CSS0024021 Camellia sinensis var. sinensis HOM05D002788 ORTHO05D003199 4.2e-20 100.9 71 73.2
MD15G1289100 Malus domestica HOM05D002788 ORTHO05D003199 1.2e-19 99.4 71 69.0
Hund13915 Selenicereus undatus HOM05D002788 ORTHO05D003199 1.2e-19 99.4 73 69.9
Prupe.6G228700 Prunus persica HOM05D002788 ORTHO05D003199 1.6e-19 99.0 64 71.9
RcHm_v2.0_Chr2g0106701 Rosa chinensis HOM05D002788 ORTHO05D003199 3.6e-19 97.8 72 69.4
EL10Ac6g15687 Beta vulgaris HOM05D002788 ORTHO05D003199 8.0e-19 96.7 73 71.2
Manes.13G117900 Manihot esculenta HOM05D002788 ORTHO05D003199 8.0e-19 96.7 71 69.0
Cpa.g.sc6.94 Carica papaya HOM05D002788 ORTHO05D003199 2.3e-18 95.1 71 66.2
AUR62038257 Chenopodium quinoa HOM05D002788 ORTHO05D003199 2.3e-18 95.1 74 66.2
HanXRQChr16g0529941 Helianthus annuus HOM05D002788 ORTHO05D003199 2.3e-18 95.1 73 69.9
Gohir.A11G047700 Gossypium hirsutum HOM05D002788 ORTHO05D003199 4.0e-18 94.4 71 66.2
Gohir.D11G051300 Gossypium hirsutum HOM05D002788 ORTHO05D003199 4.0e-18 94.4 71 66.2
Lalb_Chr09g0333921 Lupinus albus HOM05D002788 ORTHO05D003199 4.0e-18 94.4 64 73.4
MELO3C007587.2 Cucumis melo HOM05D002788 ORTHO05D003199 5.2e-18 94.0 64 68.8
Gorai.007G055700 Gossypium raimondii HOM05D002788 ORTHO05D003199 5.2e-18 94.0 71 66.2
Potri.007G049300 Populus trichocarpa HOM05D002788 ORTHO05D003199 5.2e-18 94.0 71 67.6
ECA232G1505 Erigeron canadensis HOM05D002788 ORTHO05D003199 8.9e-18 93.2 74 68.9
Ah.02g125730 Amaranthus hybridus HOM05D002788 ORTHO05D003199 1.2e-17 92.8 73 68.5
CDE06G0383 Ceratophyllum demersum HOM05D002788 ORTHO05D003199 1.2e-17 92.8 71 64.8
Lalb_Chr05g0226181 Lupinus albus HOM05D002788 ORTHO05D003199 1.2e-17 92.8 71 67.6
Thecc.01G063800 Theobroma cacao HOM05D002788 ORTHO05D003199 1.5e-17 92.4 71 64.8
Ca_28705_v3 Cicer arietinum L. HOM05D002788 ORTHO05D003199 2.6e-17 91.7 46 87.0
Ciclev10026104m.g Citrus clementina HOM05D002788 ORTHO05D003199 2.6e-17 91.7 71 66.2
Lj4C156T11 Lonicera japonica HOM05D002788 ORTHO05D003199 2.6e-17 91.7 67 68.7
Medtr4g094988 Medicago truncatula HOM05D002788 ORTHO05D003199 2.6e-17 91.7 71 67.6
ATR0736G213 Amborella trichopoda HOM05D002788 ORTHO05D003199 3.4e-17 91.3 71 64.8
THA.LOC104804199 Tarenaya hassleriana HOM05D002788 ORTHO05D003199 4.4e-17 90.9 72 62.5
TPR.G23902 Trifolium pratense HOM05D002788 ORTHO05D003199 4.4e-17 90.9 71 66.2
TWI53G1439 Tripterygium wilfordii HOM05D002788 ORTHO05D003199 4.4e-17 90.9 71 66.2
CARHR245670 Cardamine hirsuta HOM05D002788 ORTHO05D003199 5.7e-17 90.5 72 63.9
CANSAT25G1175 Cannabis sativa HOM05D002788 ORTHO05D003199 9.8e-17 89.7 71 63.4
Phvul.003G239950 Phaseolus vulgaris HOM05D002788 ORTHO05D003199 9.8e-17 89.7 71 64.8
CsaV3_6G043580 Cucumis sativus L. HOM05D002788 ORTHO05D003199 1.7e-16 89.0 64 65.6
AL7G13564 Arabidopsis lyrata HOM05D002788 ORTHO05D003199 2.2e-16 88.6 72 62.5
AT4G37280 Arabidopsis thaliana HOM05D002788 ORTHO05D003199 2.2e-16 88.6 72 62.5
BcaNung02534 Brassica carinata HOM05D002788 ORTHO05D003199 2.2e-16 88.6 72 61.1
Duzib187G1145 Durio zibethinus HOM05D002788 ORTHO05D003199 2.2e-16 88.6 71 63.4
Thhalv10025747m.g Eutrema salsugineum HOM05D002788 ORTHO05D003199 2.2e-16 88.6 72 62.5
Sp7g34940 Schrenkiella parvula HOM05D002788 ORTHO05D003199 2.2e-16 88.6 72 62.5
Solyc02g092910.3 Solanum lycopersicum HOM05D002788 ORTHO05D003199 2.8e-16 88.2 71 64.8
Sopen02g037470 Solanum pennellii HOM05D002788 ORTHO05D003199 2.8e-16 88.2 71 64.8
CDE04G1693 Ceratophyllum demersum HOM05D002788 ORTHO05D003199 3.7e-16 87.8 71 62.0
Pp3c7_24000 Physcomitrium patens HOM05D002788 ORTHO05D003199 4.9e-16 87.4 71 59.2
DCAR_010851 Daucus carota HOM05D002788 ORTHO05D003199 6.3e-16 87.0 67 70.1
Migut.L00184 Erythranthe guttata HOM05D002788 ORTHO05D003199 8.3e-16 86.7 67 62.7
Glyma.05G099000 Glycine max HOM05D002788 ORTHO05D003199 8.3e-16 86.7 67 62.7
Glyma.17G166700 Glycine max HOM05D002788 ORTHO05D003199 8.3e-16 86.7 67 62.7
Hma1.2p1_0239F.1_g100000 Hydrangea macrophylla HOM05D002788 ORTHO05D003199 1.1e-15 86.3 60 71.7
Psat4g082600 Pisum sativum HOM05D002788 ORTHO05D003199 1.4e-15 85.9 71 64.8
Carub.0007s0301 Capsella rubella HOM05D002788 ORTHO05D003199 1.8e-15 85.5 72 61.1
Duzib147G0609 Durio zibethinus HOM05D002788 ORTHO05D003199 1.8e-15 85.5 71 60.6
PGR004G1569 Punica granatum HOM05D002788 ORTHO05D003199 1.8e-15 85.5 71 66.2
Nitab4.5_0001373g0010 Nicotiana tabacum HOM05D002788 ORTHO05D003199 2.4e-15 85.1 80 56.2
CBR_g29291 Chara braunii HOM05D002788 ORTHO05D000231 4.1e-15 84.3 70 62.9
Pp3c11_2210 Physcomitrium patens HOM05D002788 ORTHO05D003199 4.1e-15 84.3 71 59.2
Sed0000616 Sechium edule HOM05D002788 ORTHO05D003199 7.0e-15 83.6 60 68.3
CSS0038061 Camellia sinensis var. sinensis HOM05D002788 ORTHO05D003199 2.7e-14 81.6 82 58.5
unitig_748.g7265 Utricularia gibba HOM05D002788 ORTHO05D003199 3.5e-14 81.3 56 69.6
A01p01690 Brassica napus HOM05D002788 ORTHO05D003199 5.9e-14 80.5 72 56.9
C01p01850 Brassica napus HOM05D002788 ORTHO05D003199 5.9e-14 80.5 72 56.9
BraA01t00160Z Brassica rapa HOM05D002788 ORTHO05D003199 5.9e-14 80.5 72 56.9
PGSC0003DMG400024952 Solanum tuberosum HOM05D002788 ORTHO05D003199 5.9e-14 80.5 79 54.4
MD15G1289300 Malus domestica HOM05D002788 ORTHO05D003199 1.0e-13 79.7 71 60.6
Mapoly0072s0079 Marchantia polymorpha HOM05D002788 ORTHO05D003199 1.0e-13 79.7 63 61.9
FvH4_1g16800 Fragaria vesca HOM05D002788 ORTHO05D003199 1.3e-13 79.3 71 62.0
ClCG01G017100 Citrullus lanatus HOM05D002788 ORTHO05D003199 1.7e-13 79.0 89 48.3
BolC1t00178H Brassica oleracea HOM05D002788 ORTHO05D003199 3.9e-13 77.8 76 53.9
SMO119G0471 Selaginella moellendorffii HOM05D002788 ORTHO05D003199 5.0e-13 77.4 55 61.8
HanXRQChr14g0449701 Helianthus annuus HOM05D002788 ORTHO05D003199 6.6e-13 77.0 64 60.9
SHI15279 Sapria himalayana HOM05D002788 ORTHO05D003199 6.6e-13 77.0 64 57.8
QL06p040039 Quercus lobata HOM05D002788 ORTHO05D003199 8.6e-13 76.6 77 57.1
ECA238G0306 Erigeron canadensis HOM05D002788 ORTHO05D003199 1.1e-12 76.3 63 63.5
GSVIVG01009409001 Vitis vinifera HOM05D002788 ORTHO05D003199 1.1e-12 76.3 49 69.4
CiPaw.15G050600 Carya illinoinensis HOM05D002788 ORTHO05D003199 1.5e-12 75.9 84 54.8
Cc07_g06470 Coffea canephora HOM05D002788 ORTHO05D003199 3.3e-12 74.7 88 48.9
Oeu037164.1 Olea europaea HOM05D002788 ORTHO05D003199 4.3e-12 74.3 63 58.7
Os11g0545600 Oryza sativa ssp. japonica HOM05D002788 ORTHO05D003199 4.3e-12 74.3 51 64.7
Prupe.1G429500 Prunus persica HOM05D002788 ORTHO05D003199 5.6e-12 73.9 57 59.6
Lj4g0006274 Lotus japonicus HOM05D002788 ORTHO05D003199 7.3e-12 73.6 73 57.5
Aqoxy5G01141 Aquilegia oxysepala HOM05D002788 ORTHO05D003199 9.5e-12 73.2 75 58.7
RcHm_v2.0_Chr6g0308521 Rosa chinensis HOM05D002788 ORTHO05D003199 2.8e-11 71.6 89 50.6
PGR083G2469 Punica granatum HOM05D002788 ORTHO05D003199 3.6e-11 71.2 82 47.6
Thecc.08G095900 Theobroma cacao HOM05D002788 ORTHO05D003199 3.6e-11 71.2 45 71.1
Migut.N02722 Erythranthe guttata HOM05D002788 ORTHO05D003199 1.0e-10 69.7 46 67.4
PSO170G3656 Papaver somniferum HOM05D002788 ORTHO05D003199 1.0e-10 69.7 85 54.1
PSO210G1707 Papaver somniferum HOM05D002788 ORTHO05D003199 1.0e-10 69.7 85 54.1
Zm00001eb236910 Zea mays HOM05D002788 ORTHO05D003199 1.0e-10 69.7 63 58.7
MSTRG.22251 Avicennia marina HOM05D002788 ORTHO05D003199 1.4e-10 69.3 78 50.0
FAN15G1867 Fragaria x ananassa HOM05D002788 ORTHO05D003199 1.4e-10 69.3 91 51.6
FAN27G2631 Fragaria x ananassa HOM05D002788 ORTHO05D003199 2.3e-10 68.6 89 51.7
AagrBONN_evm.TU.Sc2ySwM_344.160 Anthoceros agrestis HOM05D002788 ORTHO05D003199 3.1e-10 68.2 68 52.9
FAN19G1412 Fragaria x ananassa HOM05D002788 ORTHO05D025609 3.1e-10 68.2 81 51.9
Lalb_Chr25g0279131 Lupinus albus HOM05D002788 ORTHO05D003199 3.1e-10 68.2 68 50.0
FAN20G2575 Fragaria x ananassa HOM05D002788 ORTHO05D003199 4.0e-10 67.8 89 51.7
Lj4A764T9 Lonicera japonica HOM05D002788 ORTHO05D003199 4.0e-10 67.8 68 52.9
FAN19G2167 Fragaria x ananassa HOM05D002788 ORTHO05D003199 5.2e-10 67.4 127 38.6
AT1G02740 Arabidopsis thaliana HOM05D002788 ORTHO05D003199 6.8e-10 67.0 92 45.7
FAN23G0486 Fragaria x ananassa HOM05D002788 ORTHO05D003199 6.8e-10 67.0 81 50.6
Eucgr.F00003 Eucalyptus grandis HOM05D002788 ORTHO05D003199 8.9e-10 66.6 71 52.1
Cfa018044 Carpinus fangiana HOM05D002788 ORTHO05D003199 1.5e-09 65.9 86 48.8
FAN28G0140 Fragaria x ananassa HOM05D002788 ORTHO05D025609 1.5e-09 65.9 81 49.4
FAN28G0483 Fragaria x ananassa HOM05D002788 ORTHO05D025609 1.5e-09 65.9 81 49.4
Lsat_1_v5_gn_4_164040 Lactuca sativa HOM05D002788 ORTHO05D003199 1.5e-09 65.9 75 54.7
Peaxi162Scf00266g00098 Petunia axillaris HOM05D002788 ORTHO05D003199 1.5e-09 65.9 80 52.5
vmacro05249 Vaccinium macrocarpon HOM05D002788 ORTHO05D003199 1.5e-09 65.9 115 41.7
Solyc04g078400.3 Solanum lycopersicum HOM05D002788 ORTHO05D003199 2.0e-09 65.5 76 50.0
Sopen04g032010 Solanum pennellii HOM05D002788 ORTHO05D003199 2.0e-09 65.5 76 50.0
Lsat_1_v5_gn_2_85480 Lactuca sativa HOM05D002788 ORTHO05D003199 2.6e-09 65.1 116 39.7
FvH4_2g33880 Fragaria vesca HOM05D002788 ORTHO05D003199 3.4e-09 64.7 89 49.4
FAN26G2597 Fragaria x ananassa HOM05D002788 ORTHO05D003199 4.4e-09 64.3 67 55.2
FAN28G2079 Fragaria x ananassa HOM05D002788 ORTHO05D003199 4.4e-09 64.3 123 38.2
QL02p003467 Quercus lobata HOM05D002788 ORTHO05D003199 7.5e-09 63.5 72 52.8
C08p53170 Brassica napus HOM05D002788 ORTHO05D003199 1.3e-08 62.8 90 42.2
BolC8t52832H Brassica oleracea HOM05D002788 ORTHO05D003199 1.3e-08 62.8 90 42.2
CARHR002040 Cardamine hirsuta HOM05D002788 ORTHO05D003199 1.3e-08 62.8 41 63.4
CsaV3_4G034740 Cucumis sativus L. HOM05D002788 ORTHO05D003199 1.3e-08 62.8 69 52.2
AL1G12120 Arabidopsis lyrata HOM05D002788 ORTHO05D003199 1.7e-08 62.4 92 42.4
FAN24G0184 Fragaria x ananassa HOM05D000038 ORTHO05D000612 1.7e-08 62.4 89 48.3
Duzib093G2105 Durio zibethinus HOM05D002788 ORTHO05D003199 2.2e-08 62.0 89 44.9
Carub.0001s0184 Capsella rubella HOM05D002788 ORTHO05D003199 2.9e-08 61.6 68 47.1
PSO591G0272 Papaver somniferum HOM05D025353 ORTHO05D003199 3.7e-08 61.2 51 54.9
ClCG05G020270 Citrullus lanatus HOM05D002788 ORTHO05D003199 4.9e-08 60.8 69 50.7
BcaC07g42305 Brassica carinata HOM05D002788 ORTHO05D003199 6.4e-08 60.5 45 55.6
Ca_15927_v3 Cicer arietinum L. HOM05D002788 ORTHO05D003199 8.3e-08 60.1 41 56.1
THA.LOC104812581 Tarenaya hassleriana HOM05D002788 ORTHO05D003199 8.3e-08 60.1 91 42.9
Atru.chr13.768 Acer truncatum HOM05D002788 ORTHO05D003199 1.1e-07 59.7 85 40.0
Lalb_Chr23g0267341 Lupinus albus HOM05D002788 ORTHO05D003199 1.1e-07 59.7 65 41.5
Nitab4.5_0007681g0010 Nicotiana tabacum HOM05D002788 ORTHO05D003199 1.4e-07 59.3 69 49.3
Thhalv10008162m.g Eutrema salsugineum HOM05D002788 ORTHO05D003199 2.4e-07 58.5 92 39.1
Nitab4.5_0001984g0110 Nicotiana tabacum HOM05D002788 ORTHO05D003199 2.4e-07 58.5 69 49.3
Nitab4.5_0002578g0030 Nicotiana tabacum HOM05D002788 ORTHO05D003199 2.4e-07 58.5 64 50.0
Sed0011866 Sechium edule HOM05D002788 ORTHO05D003199 2.4e-07 58.5 76 48.7
A09p68560 Brassica napus HOM05D002788 ORTHO05D003199 4.1e-07 57.8 93 39.8
MD15G1076200 Malus domestica HOM05D002788 ORTHO05D003199 4.1e-07 57.8 55 47.3
Medtr3g102460 Medicago truncatula HOM05D002788 ORTHO05D003199 4.1e-07 57.8 41 53.7
Manes.05G178100 Manihot esculenta HOM05D002788 ORTHO05D003199 7.0e-07 57.0 63 49.2
Lj4g0027466 Lotus japonicus HOM05D002788 ORTHO05D003199 1.2e-06 56.2 42 59.5
Sc15g0005830 Simmondsia chinensis HOM05D002788 ORTHO05D003199 1.2e-06 56.2 38 57.9
MD08G1091800 Malus domestica HOM05D002788 ORTHO05D003199 1.6e-06 55.8 51 52.9
Rhsim10G0111800 Rhododendron simsii HOM05D002788 ORTHO05D003199 1.6e-06 55.8 49 67.3
BraA09t42199Z Brassica rapa HOM05D002788 ORTHO05D003199 2.0e-06 55.5 90 41.1
RcHm_v2.0_Chr2g0106721 Rosa chinensis HOM05D002788 ORTHO05D003199 2.0e-06 55.5 71 50.7
arahy.Tifrunner.gnm1.ann1.3R5SIR Arachis hypogaea HOM05D002788 ORTHO05D003199 2.7e-06 55.1 71 47.9
Sabra14G0014800 Salix brachista HOM05D002788 ORTHO05D003199 2.7e-06 55.1 86 41.9
Cre16.g692400 Chlamydomonas reinhardtii HOM05D002788 ORTHO05D003199 3.5e-06 54.7 52 51.9
Dinv26870 Davidia involucrata HOM05D002788 ORTHO05D003199 3.5e-06 54.7 27 81.5
Lj1g0026557 Lotus japonicus HOM05D002788 ORTHO05D003199 3.5e-06 54.7 67 43.3
Os04g0101300 Oryza sativa ssp. japonica HOM05D002788 ORTHO05D003199 4.6e-06 54.3 75 48.0
Haze_15347 Corylus avellana HOM05D002788 ORTHO05D003199 6.0e-06 53.9 67 50.7
PSO832G0699 Papaver somniferum HOM05D002788 ORTHO05D005138 6.0e-06 53.9 46 54.3
Actinidia33352 Actinidia chinensis HOM05D002788 ORTHO05D003199 7.8e-06 53.5 84 45.2


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