Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.5e-194 682.6 328 100.0
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 3.6e-175 618.2 328 88.4
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.4e-171 605.5 328 85.7
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.7e-169 599.4 328 84.1
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.1e-168 596.7 328 84.1
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 3.2e-168 595.1 328 85.7
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 2.1e-167 592.4 327 83.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 3.9e-166 588.2 328 83.8
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 2.0e-165 585.9 328 82.9
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.6e-165 585.5 326 83.4
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.7e-165 584.3 328 82.0
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 7.4e-165 583.9 328 82.0
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 9.7e-165 583.6 328 81.4
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 9.7e-165 583.6 326 82.8
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.8e-164 582.0 328 82.3
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.8e-164 582.0 326 82.2
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 2.8e-164 582.0 328 82.0
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 4.8e-164 581.3 329 83.0
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.4e-163 579.7 326 82.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.8e-163 579.3 328 82.9
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.1e-163 578.6 327 82.3
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 3.1e-163 578.6 326 81.6
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 9.1e-163 577.0 326 80.1
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.2e-162 576.6 322 83.2
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 1.2e-162 576.6 322 83.2
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 7.7e-162 573.9 328 81.4
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.0e-161 573.5 327 80.4
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.0e-161 573.5 328 80.8
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 5.0e-161 571.2 327 80.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 5.0e-161 571.2 328 82.0
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 8.5e-161 570.5 327 81.0
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 8.5e-161 570.5 328 80.5
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 3.2e-160 568.5 328 81.1
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 4.2e-160 568.2 328 79.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 4.2e-160 568.2 328 80.8
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.0e-158 563.5 326 81.6
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.8e-158 562.8 328 80.5
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.7e-158 560.8 329 79.6
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 8.8e-158 560.5 328 80.8
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 8.8e-158 560.5 328 79.6
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.5e-157 559.7 325 78.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 7.5e-157 557.4 328 78.4
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 9.7e-157 557.0 327 78.9
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 3.7e-156 555.1 330 79.1
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.7e-156 555.1 329 79.3
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 3.7e-156 555.1 328 79.6
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 4.8e-156 554.7 325 78.5
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.1e-155 553.5 327 78.9
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.1e-155 552.0 329 79.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 4.1e-155 551.6 330 78.8
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 4.1e-155 551.6 328 79.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 9.1e-155 550.4 328 77.4
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.6e-154 549.7 331 78.9
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 2.7e-154 548.9 317 80.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 3.5e-154 548.5 330 77.6
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 4.5e-154 548.1 330 78.2
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 5.9e-154 547.7 327 79.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.7e-153 546.2 341 78.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.9e-153 545.4 328 78.0
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 3.8e-153 545.0 330 78.2
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.1e-152 543.5 328 78.0
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 2.5e-152 542.3 308 80.2
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 7.2e-152 540.8 330 77.9
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 9.4e-152 540.4 335 75.5
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 9.4e-152 540.4 328 77.1
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 8.0e-151 537.3 346 74.9
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 6.8e-150 534.3 341 74.8
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 3.4e-149 531.9 330 76.4
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 4.4e-149 531.6 338 75.1
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 3.7e-148 528.5 328 76.5
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 4.8e-148 528.1 318 77.0
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.1e-147 526.9 326 77.0
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.1e-147 526.9 328 75.9
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.8e-147 526.2 326 76.7
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.4e-147 525.8 328 76.2
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 5.4e-147 524.6 328 75.3
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 3.5e-146 521.9 310 78.1
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.0e-145 520.4 328 74.7
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 2.5e-144 515.8 305 79.0
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.6e-143 513.1 313 76.7
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 6.1e-143 511.1 328 71.6
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 8.8e-142 507.3 328 72.3
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 2.6e-141 505.8 328 75.9
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 8.3e-140 500.7 326 72.4
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 8.3e-140 500.7 328 73.8
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.1e-139 498.8 312 75.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.5e-138 495.4 328 72.3
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.3e-132 476.9 325 68.3
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.2e-132 476.1 325 68.0
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.5e-130 468.8 253 85.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 2.6e-125 452.6 317 68.8
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.4e-125 451.8 255 81.2
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 8.3e-124 447.6 306 67.6
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 3.5e-122 442.2 328 62.8
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.3e-121 440.3 256 78.9
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.7e-121 439.9 254 79.1
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.8e-118 429.9 309 64.4
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.3e-118 429.5 241 80.9
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 4.0e-118 428.7 277 72.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 7.5e-117 424.5 328 64.3
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 2.8e-111 406.0 254 75.2
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 3.6e-111 405.6 309 61.2
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 8.9e-110 401.0 317 58.7
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 5.8e-101 371.7 220 80.0
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.6e-95 353.6 198 83.3
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.9e-91 340.1 312 53.2
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 7.9e-82 308.1 166 80.7
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 3.7e-63 246.1 144 82.6
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 3.0e-57 226.5 132 80.3
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 5.2e-49 199.1 142 61.3
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 5.7e-48 195.7 311 39.2
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.2e-45 188.0 287 37.3
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 8.5e-44 181.8 115 73.0
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 2.6e-40 170.2 306 34.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-31 140.6 111 67.6
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.4e-30 137.9 109 56.0
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.4e-30 137.9 133 55.6
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 5.4e-30 136.0 82 72.0
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-28 130.2 78 79.5
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.5e-27 127.1 68 76.5
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 3.5e-21 106.7 72 69.4
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 5.0e-20 102.8 58 81.0
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 7.0e-14 82.4 69 56.5
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.3e-07 61.6 61 52.5
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.2e-07 60.8 36 72.2
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-07 60.8 40 65.0


User provided reference genes

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