Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.2e-129 466.5 231 100.0
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 8.9e-56 221.1 188 62.8
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.0e-51 207.6 227 52.9
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 9.9e-47 191.0 252 45.2
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.7e-46 190.3 269 43.9
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 1.3e-43 180.6 270 38.9
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 1.1e-40 171.0 235 43.8
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 4.0e-40 169.1 257 42.8
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.3e-40 168.7 297 39.1
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 9.0e-40 167.9 278 37.8
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 7.6e-39 164.9 272 43.8
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.9e-38 162.9 249 42.2
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.4e-37 160.6 242 43.4
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 4.2e-37 159.1 226 43.8
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 5.4e-37 158.7 250 41.6
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 7.1e-37 158.3 291 37.1
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 9.3e-37 157.9 288 37.2
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 1.2e-36 157.5 252 43.3
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 3.5e-36 156.0 252 41.3
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 3.5e-36 156.0 187 50.3
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 3.5e-36 156.0 265 40.0
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 7.8e-36 154.8 262 40.5
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.0e-35 154.5 256 39.5
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 3.9e-35 152.5 270 40.4
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 5.1e-35 152.1 251 40.2
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 8.7e-35 151.4 250 42.0
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.1e-34 151.0 243 40.3
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.1e-34 151.0 273 38.1
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.1e-34 151.0 320 34.4
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.5e-34 149.8 273 37.7
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 5.6e-34 148.7 228 37.7
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 5.6e-34 148.7 190 46.8
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 7.3e-34 148.3 269 39.4
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 9.6e-34 147.9 190 46.8
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 2.8e-33 146.4 188 48.4
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 8.1e-33 144.8 251 38.6
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 1.4e-32 144.1 263 39.9
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 1.4e-32 144.1 247 38.1
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 3.1e-32 142.9 247 37.2
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 6.9e-32 141.7 251 36.3
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 9.0e-32 141.4 248 38.7
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 1.5e-31 140.6 258 38.0
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 2.0e-31 140.2 244 36.5
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 2.6e-31 139.8 247 38.9
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.4e-31 139.4 270 37.4
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 7.6e-31 138.3 315 32.7
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.7e-30 137.1 271 37.3
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 2.2e-30 136.7 188 46.3
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 2.9e-30 136.3 239 40.6
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.1e-29 134.4 248 35.9
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.9e-29 133.7 249 37.8
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.9e-29 133.7 250 36.8
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 1.9e-29 133.7 283 34.6
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 1.9e-29 133.7 265 34.0
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 2.4e-29 133.3 258 36.4
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 4.2e-29 132.5 133 57.9
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 4.2e-29 132.5 157 50.3
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 1.6e-28 130.6 246 35.8
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 2.1e-28 130.2 237 38.8
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 7.9e-28 128.3 255 37.3
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 1.3e-27 127.5 249 36.9
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 1.3e-27 127.5 158 48.7
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 1.8e-27 127.1 233 41.2
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 5.1e-27 125.6 233 38.6
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 6.7e-27 125.2 195 42.1
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 1.9e-26 123.6 253 38.3
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 4.3e-26 122.5 293 33.4
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 7.4e-26 121.7 104 63.5
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.3e-25 120.9 218 40.4
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.3e-25 120.9 244 36.5
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.8e-24 117.1 178 42.7
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.8e-24 117.1 291 32.0
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 2.4e-24 116.7 268 33.6
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 4.0e-24 115.9 258 32.6
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 5.3e-24 115.5 204 38.2
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 5.8e-23 112.1 289 32.2
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 3.8e-22 109.4 138 48.6
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 8.4e-22 108.2 208 38.5
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 2.5e-21 106.7 160 44.4
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 4.2e-21 105.9 201 39.3
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 5.5e-21 105.5 100 54.0
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 5.5e-21 105.5 207 38.2
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 2.7e-20 103.2 128 46.9
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 7.4e-18 95.1 185 34.6
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 8.2e-17 91.7 204 32.4
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 1.4e-16 90.9 94 54.3
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 1.8e-16 90.5 103 48.5
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 2.4e-16 90.1 107 44.9
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 3.1e-16 89.7 98 50.0
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.8e-15 85.5 84 57.1
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 7.6e-15 85.1 83 56.6
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.3e-14 84.3 161 37.3
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 2.9e-14 83.2 265 28.7
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 1.6e-12 77.4 145 38.6
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 4.6e-12 75.9 118 39.8
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 4.6e-12 75.9 159 34.6
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 5.1e-11 72.4 140 35.0
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 8.7e-11 71.6 170 31.8
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 3.3e-10 69.7 151 33.1
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 6.3e-09 65.5 206 28.2
Ah.05g168300 Amaranthus hybridus HOM05D007372 ORTHO05D009318 3.1e-08 63.2 227 28.6
Medtr6g040180 Medicago truncatula HOM05D007372 ORTHO05D009318 7.7e-07 58.5 107 29.9
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.3e-06 57.8 98 35.7


User provided reference genes

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