Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 5.3e-190 667.5 339 100.0
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.7e-109 399.4 314 68.2
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 3.5e-93 345.9 311 62.7
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.9e-87 326.2 312 61.2
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.6e-82 310.5 313 58.1
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 9.9e-80 301.2 312 56.1
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 2.1e-77 293.5 337 53.7
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 2.7e-77 293.1 312 55.8
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 1.8e-73 280.4 287 56.1
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 2.4e-73 280.0 333 53.8
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 3.8e-71 272.7 309 53.7
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 6.5e-71 271.9 313 54.3
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.2e-69 267.7 311 52.7
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 3.5e-69 266.2 323 52.9
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 3.5e-69 266.2 334 50.3
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 6.0e-69 265.4 315 53.0
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 7.9e-69 265.0 328 49.4
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 7.9e-69 265.0 325 52.0
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.0e-68 264.6 334 50.0
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.3e-68 263.5 334 50.0
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 6.7e-68 261.9 311 50.2
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 8.2e-66 255.0 329 49.2
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 6.9e-65 251.9 313 50.8
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 1.2e-64 251.1 314 51.3
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 2.0e-64 250.4 313 49.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.6e-64 250.0 329 50.5
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 3.4e-64 249.6 315 49.5
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 7.7e-64 248.4 321 50.5
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.2e-63 246.9 316 49.7
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 2.2e-63 246.9 312 52.2
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 6.5e-63 245.4 313 48.6
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.6e-61 240.7 312 47.1
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.7e-61 240.0 316 49.4
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 3.6e-61 239.6 322 46.9
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.3e-60 236.9 312 48.4
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 5.1e-60 235.7 311 49.2
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.0e-59 233.8 313 47.3
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 9.7e-59 231.5 320 45.6
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.3e-58 231.1 367 43.9
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.4e-57 226.9 311 47.6
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 2.0e-56 223.8 321 45.2
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.4e-56 223.0 317 46.4
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.4e-56 223.0 317 46.4
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 2.9e-55 219.9 313 44.7
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 6.5e-55 218.8 320 47.8
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 6.5e-55 218.8 323 47.7
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 8.5e-55 218.4 386 41.5
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.5e-54 216.9 346 41.3
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 5.5e-54 215.7 316 44.0
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 9.4e-54 214.9 315 44.8
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.2e-53 214.5 308 47.4
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 1.0e-52 211.5 428 39.5
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.8e-52 210.7 320 46.6
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 3.0e-52 209.9 313 45.0
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 3.9e-52 209.5 316 45.3
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 8.8e-52 208.4 313 44.7
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 6.3e-50 202.2 312 42.0
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 8.0e-45 185.3 337 42.7
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 7.4e-43 178.7 322 42.5
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 8.2e-42 175.3 226 47.8
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.1e-41 174.9 294 44.6
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.2e-40 171.4 316 40.2
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.2e-40 171.4 316 40.2
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 1.6e-40 171.0 336 39.0
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 2.6e-40 170.2 310 39.4
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.3e-39 167.9 323 39.9
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.2e-37 161.4 346 37.3
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 8.0e-37 158.7 345 38.8
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 1.0e-36 158.3 313 41.5
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.8e-36 157.5 274 43.1
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 5.2e-36 156.0 310 41.0
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 6.7e-36 155.6 313 40.3
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 8.8e-36 155.2 326 38.0
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 1.2e-35 154.8 314 40.1
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.3e-34 151.4 334 38.6
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.7e-34 151.0 324 36.7
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 6.3e-34 149.1 297 39.7
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 5.3e-33 146.0 243 42.0
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.2e-32 144.8 324 35.8
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 1.0e-31 141.7 328 34.5
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 5.0e-31 139.4 306 36.6
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 1.5e-30 137.9 314 38.2
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 1.5e-30 137.9 324 35.5
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 4.2e-30 136.3 220 39.5
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 7.2e-30 135.6 315 36.5
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 1.2e-29 134.8 318 34.6
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.7e-29 133.7 306 37.9
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 4.7e-29 132.9 173 45.7
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 3.0e-28 130.2 217 41.5
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 3.0e-28 130.2 293 36.2
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 3.4e-27 126.7 222 41.4
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.7e-26 124.4 230 42.2
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 2.2e-26 124.0 318 36.8
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 2.8e-26 123.6 330 36.7
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.1e-25 121.7 324 35.2
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.4e-25 121.3 152 50.7
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 5.4e-25 119.4 281 35.9
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 9.1e-25 118.6 243 37.0
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 2.0e-24 117.5 210 39.0
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 3.5e-24 116.7 222 40.5
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 5.9e-24 115.9 255 39.2
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 5.9e-24 115.9 211 43.6
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 7.7e-24 115.5 232 36.2
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.3e-23 114.8 327 34.9
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 8.6e-23 112.1 318 34.0
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 3.3e-22 110.2 325 34.2
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.2e-21 108.2 322 34.8
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 4.7e-21 106.3 201 37.8
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.0e-20 103.6 259 33.6
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 6.8e-20 102.4 309 35.0
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 1.5e-19 101.3 297 34.3
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 3.4e-19 100.1 325 32.6
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 2.2e-18 97.4 308 32.5
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.9e-15 87.0 205 36.1
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 3.9e-15 86.7 228 34.2
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 1.5e-14 84.7 300 32.3
MBI19_g46225_MAGBIO Magnolia biondii HOM05D006273 ORTHO05D015157 1.9e-14 84.3 75 61.3
TAR633G1585 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.3e-14 83.2 108 51.9
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 1.2e-13 81.6 218 34.9
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 8.0e-13 79.0 201 33.8
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 3.4e-11 73.6 103 47.6
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 5.8e-11 72.8 98 44.9
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 2.9e-10 70.5 121 41.3
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 6.4e-10 69.3 50 72.0
TAR362G0484 Trochodendron aralioides HOM05D006273 ORTHO05D007607 6.4e-10 69.3 65 60.0
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 8.3e-10 68.9 142 35.2


User provided reference genes

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