Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1180 Trochodendron aralioides HOM05D000867 ORTHO05D415421 4.2e-121 438.0 208 100.0
TAR625G1120 Trochodendron aralioides HOM05D000867 ORTHO05D000864 3.3e-49 199.1 272 43.8
TAR376G0184 Trochodendron aralioides HOM05D000867 ORTHO05D000864 1.1e-47 194.1 276 42.8
TAR628G1001 Trochodendron aralioides HOM05D000867 ORTHO05D000864 1.6e-43 180.3 244 45.5
Nn1g05337 Nelumbo nucifera HOM05D000867 ORTHO05D000864 1.2e-35 154.1 299 36.5
MBI02_g08729_MAGBIO Magnolia biondii HOM05D000867 ORTHO05D000864 2.5e-25 119.8 169 41.4
Cpa.g.sc42.65 Carica papaya HOM05D000867 ORTHO05D000864 4.0e-23 112.5 279 30.8
MBI05_g15586_MAGBIO Magnolia biondii HOM05D000867 ORTHO05D000864 2.6e-22 109.8 195 39.0
Dinv44766 Davidia involucrata HOM05D000867 ORTHO05D000864 1.0e-18 97.8 127 42.5
Dinv24196 Davidia involucrata HOM05D000867 ORTHO05D000864 5.1e-18 95.5 273 27.8
Lj9A353G64 Lonicera japonica HOM05D000867 ORTHO05D000864 2.5e-17 93.2 265 30.2
Haze_10687 Corylus avellana HOM05D000867 ORTHO05D000864 1.3e-16 90.9 274 25.5
QL11p020619 Quercus lobata HOM05D000867 ORTHO05D000864 2.8e-16 89.7 155 36.1
Aqoxy6G00806 Aquilegia oxysepala HOM05D000867 ORTHO05D000864 8.1e-16 88.2 276 30.1
Dinv13023 Davidia involucrata HOM05D000867 ORTHO05D000864 1.8e-15 87.0 132 40.9
Cfa005606 Carpinus fangiana HOM05D000867 ORTHO05D000864 6.9e-15 85.1 274 25.5
CSS0001819 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 2.0e-14 83.6 282 27.3
Thecc.02G139300 Theobroma cacao HOM05D000867 ORTHO05D000864 2.0e-14 83.6 136 37.5
Dinv09037 Davidia involucrata HOM05D000867 ORTHO05D000864 2.9e-13 79.7 106 45.3
Duzib132G1073 Durio zibethinus HOM05D000867 ORTHO05D000864 3.2e-12 76.3 142 38.7
QL12p036586 Quercus lobata HOM05D000867 ORTHO05D000864 7.1e-12 75.1 139 37.4
Actinidia00264 Actinidia chinensis HOM05D000867 ORTHO05D000864 1.2e-11 74.3 268 27.2
CiPaw.05G036200 Carya illinoinensis HOM05D000867 ORTHO05D000864 2.1e-11 73.6 132 33.3
CiPaw.07G180700 Carya illinoinensis HOM05D000867 ORTHO05D000864 2.7e-11 73.2 180 34.4
Duzib248G0024 Durio zibethinus HOM05D000867 ORTHO05D000864 1.8e-10 70.5 142 36.6
Dinv09036 Davidia involucrata HOM05D000867 ORTHO05D035055 5.1e-10 68.9 47 61.7
Cfa013628 Carpinus fangiana HOM05D000867 ORTHO05D000864 6.7e-10 68.6 132 34.8
Duzib052G0574 Durio zibethinus HOM05D000867 ORTHO05D000864 1.5e-09 67.4 180 33.9
Manes.02G153200 Manihot esculenta HOM05D000867 ORTHO05D000864 1.9e-09 67.0 167 32.9
CSS0021744 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 2.5e-09 66.6 115 38.3
CSS0004913 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 3.3e-09 66.2 150 33.3
Prupe.1G515100 Prunus persica HOM05D000867 ORTHO05D000864 1.3e-08 64.3 133 33.8
Ciclev10000337m.g Citrus clementina HOM05D000867 ORTHO05D000864 2.1e-08 63.5 123 37.4
Actinidia23992 Actinidia chinensis HOM05D000867 ORTHO05D000864 3.7e-08 62.8 128 34.4
Cpa.g.sc36.125 Carica papaya HOM05D000867 ORTHO05D000864 3.7e-08 62.8 196 30.6
VMungo0251G0704 Vigna mungo HOM05D000867 ORTHO05D000864 1.8e-07 60.5 131 32.8
Haze_22258 Corylus avellana HOM05D000867 ORTHO05D000864 2.4e-07 60.1 132 32.6
Hma1.2p1_0120F.1_g057340 Hydrangea macrophylla HOM05D000867 ORTHO05D000864 6.9e-07 58.5 101 39.6
TWI56G0548 Tripterygium wilfordii HOM05D000867 ORTHO05D000864 6.9e-07 58.5 267 27.7
MD08G1181900 Malus domestica HOM05D000867 ORTHO05D000864 1.2e-06 57.8 92 38.0
Manes.18G068100 Manihot esculenta HOM05D000867 ORTHO05D000864 1.2e-06 57.8 102 36.3
vmacro04749 Vaccinium macrocarpon HOM05D000867 ORTHO05D000864 2.6e-06 56.6 146 28.8


User provided reference genes

Program Settings