Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 9.4e-130 466.8 234 100.0
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.2e-89 333.6 228 75.0
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.7e-78 296.6 218 67.9
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.1e-77 293.9 231 65.8
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.7e-76 289.3 233 61.4
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 1.8e-75 286.6 214 66.4
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 6.9e-72 274.6 238 62.6
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 2.0e-71 273.1 228 60.1
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 2.9e-70 269.2 233 61.8
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.8e-70 268.9 220 65.0
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 4.9e-70 268.5 222 63.1
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 4.9e-70 268.5 233 57.1
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.4e-69 266.9 215 60.0
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.4e-69 266.2 224 60.3
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 4.2e-69 265.4 233 62.7
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.8e-67 260.0 233 56.2
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 3.0e-67 259.2 219 61.6
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.1e-66 257.3 233 59.2
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.5e-66 256.1 234 58.5
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.1e-65 253.1 233 57.9
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.8e-65 251.9 234 57.3
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 4.8e-65 251.9 228 57.5
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 6.2e-65 251.5 234 56.8
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.1e-64 250.8 221 60.6
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.1e-64 250.8 235 56.6
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 2.4e-64 249.6 234 56.4
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 4.0e-64 248.8 228 56.1
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 9.0e-64 247.7 237 57.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 9.0e-64 247.7 234 56.4
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.0e-64 247.7 215 60.5
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.0e-64 247.7 221 60.2
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.5e-63 246.9 235 57.9
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.5e-63 246.9 232 56.5
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 2.6e-63 246.1 233 57.1
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 2.6e-63 246.1 224 57.1
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 3.4e-63 245.7 227 59.9
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 4.5e-63 245.4 216 63.0
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 7.6e-63 244.6 233 57.5
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 7.6e-63 244.6 216 57.9
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 7.6e-63 244.6 213 58.2
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.3e-62 243.8 211 58.8
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.9e-61 240.0 232 55.6
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 2.5e-61 239.6 213 55.4
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 3.2e-61 239.2 218 55.5
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 3.2e-61 239.2 211 58.3
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 5.5e-61 238.4 217 60.4
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 9.3e-61 237.7 226 53.5
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 9.3e-61 237.7 241 56.0
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 9.3e-61 237.7 240 55.8
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 9.3e-61 237.7 227 54.2
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.2e-60 237.3 239 54.4
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.6e-60 236.9 238 55.0
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 3.5e-60 235.7 225 57.3
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.5e-60 235.7 219 55.7
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.0e-60 235.0 236 54.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 2.3e-59 233.0 225 54.2
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 5.1e-59 231.9 225 53.3
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 4.3e-58 228.8 223 55.2
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 5.7e-58 228.4 217 55.3
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 7.4e-58 228.0 211 55.5
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 7.4e-58 228.0 233 52.8
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 7.4e-58 228.0 233 52.8
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 2.1e-57 226.5 226 54.9
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 4.8e-57 225.3 216 56.9
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.1e-56 224.2 242 52.5
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.4e-56 223.8 216 54.2
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.8e-56 223.4 222 54.1
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.1e-56 222.2 236 53.0
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.8e-54 215.7 222 53.2
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 5.0e-54 215.3 218 53.7
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 8.5e-54 214.5 203 53.2
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 8.5e-54 214.5 219 55.7
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 4.2e-53 212.2 211 58.3
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 4.2e-53 212.2 213 53.1
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 5.5e-53 211.8 213 53.1
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 7.2e-53 211.5 221 49.3
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 1.8e-51 206.8 211 52.6
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.1e-50 204.1 204 51.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 1.1e-50 204.1 221 52.9
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.1e-50 204.1 188 53.7
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.9e-50 203.4 208 50.5
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 7.4e-50 201.4 211 50.7
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 2.2e-49 199.9 184 59.2
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 2.2e-49 199.9 220 48.6
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.7e-49 199.1 237 45.1
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 3.7e-49 199.1 214 50.5
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 8.2e-49 198.0 211 49.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.4e-48 197.2 221 48.9
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 4.1e-48 195.7 224 48.2
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.6e-47 193.0 225 47.1
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.0e-46 191.0 210 48.6
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.7e-46 190.3 215 49.3
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 2.2e-46 189.9 190 52.1
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 3.8e-46 189.1 233 44.6
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 1.1e-45 187.6 216 47.2
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.1e-45 187.6 205 49.8
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.4e-45 187.2 209 49.3
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 1.9e-45 186.8 226 46.5
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 5.5e-45 185.3 226 46.0
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 7.2e-45 184.9 243 46.1
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 3.6e-44 182.6 193 47.7
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.8e-43 180.3 222 45.9
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.3e-43 179.9 234 45.3
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.3e-43 179.9 234 45.3
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 2.3e-43 179.9 223 46.6
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.1e-42 177.6 223 46.2
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 3.3e-42 176.0 250 41.2
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.8e-41 172.9 236 39.8
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 6.9e-40 168.3 251 40.6
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 8.5e-38 161.4 170 52.9
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 8.5e-38 161.4 185 46.5
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 9.4e-37 157.9 211 41.7
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 9.7e-34 147.9 190 43.2
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 1.3e-33 147.5 190 43.2
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.8e-33 146.4 200 45.0
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.8e-32 143.7 192 44.8
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 2.4e-32 143.3 187 41.7
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 4.1e-32 142.5 208 42.3
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 9.1e-32 141.4 153 53.6
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 2.0e-31 140.2 187 41.2
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 2.0e-31 140.2 187 41.2
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.0e-30 137.9 208 46.2
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.1e-29 134.4 237 40.5
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.5e-29 134.0 205 39.0
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 9.4e-29 131.3 172 47.1
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 3.1e-24 116.3 229 37.6
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 7.5e-18 95.1 145 42.1
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 5.4e-16 89.0 81 63.0
HPP92_019356 Vanilla planifolia HOM05D006151 ORTHO05D007487 5.4e-08 62.4 112 40.2
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 7.0e-08 62.0 182 29.1


User provided reference genes

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