Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 4.2e-202 708.0 403 100.0
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 7.0e-165 584.3 398 82.2
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 2.2e-163 579.3 397 79.6
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 7.5e-159 564.3 375 84.5
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 3.7e-158 562.0 374 84.8
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 5.9e-156 554.7 401 77.6
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.0e-155 553.9 387 80.1
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 2.8e-153 545.8 397 76.1
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 3.0e-152 542.3 374 79.9
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.0e-152 542.0 375 81.1
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 1.7e-150 536.6 385 76.9
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 3.7e-150 535.4 376 80.9
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 1.4e-149 533.5 378 79.4
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 3.5e-148 528.9 397 75.8
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.5e-148 528.9 374 78.3
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 3.5e-148 528.9 374 78.3
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 3.0e-147 525.8 375 76.8
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 5.0e-147 525.0 377 76.7
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 8.6e-147 524.2 374 77.3
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 2.5e-146 522.7 377 79.0
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.2e-145 520.4 376 79.3
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 3.6e-145 518.8 374 79.4
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 6.2e-145 518.1 374 79.1
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 1.4e-144 516.9 374 76.2
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 2.3e-144 516.2 378 77.8
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 3.1e-144 515.8 378 77.8
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.2e-143 513.8 376 76.6
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 5.8e-143 511.5 376 76.1
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 7.5e-143 511.1 375 77.6
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 9.8e-143 510.8 378 75.9
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.3e-142 510.4 400 72.2
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 4.9e-142 508.4 375 77.6
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 6.4e-142 508.1 375 73.6
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 1.1e-141 507.3 374 77.0
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.1e-141 507.3 379 75.7
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 1.1e-141 507.3 375 77.1
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 5.4e-141 505.0 374 78.9
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 7.0e-141 504.6 375 73.3
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 2.0e-140 503.1 427 69.3
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 3.5e-140 502.3 374 80.2
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.5e-140 502.3 375 74.7
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 4.6e-140 501.9 377 76.9
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.6e-140 501.9 414 70.8
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 7.8e-140 501.1 375 75.7
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 7.8e-140 501.1 381 76.6
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 3.0e-139 499.2 374 72.5
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 3.9e-139 498.8 375 75.5
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 8.6e-139 497.7 375 75.5
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.5e-138 496.9 376 75.8
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 1.4e-136 490.3 375 76.5
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 5.2e-136 488.4 374 75.7
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 3.4e-135 485.7 378 75.7
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.9e-134 482.6 390 72.1
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 8.3e-134 481.1 374 75.1
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.2e-133 479.2 389 71.7
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 4.1e-133 478.8 375 72.8
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 5.4e-133 478.4 374 75.4
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 5.4e-133 478.4 375 71.5
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 2.7e-132 476.1 392 71.2
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 7.8e-132 474.6 392 72.2
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.7e-131 473.4 374 74.6
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 1.9e-130 469.9 377 69.5
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.6e-130 468.4 389 69.7
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.2e-129 467.2 379 70.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 1.2e-129 467.2 376 71.0
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-129 466.8 417 67.9
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 4.7e-129 465.3 376 73.7
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 3.1e-128 462.6 377 74.5
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.1e-128 462.6 375 73.3
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 8.9e-128 461.1 377 71.1
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 1.2e-127 460.7 378 69.8
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.0e-127 459.9 378 70.9
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 2.6e-127 459.5 375 69.9
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 2.6e-127 459.5 375 69.9
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.6e-127 459.5 387 68.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 4.4e-127 458.8 375 70.1
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 1.9e-125 453.4 376 68.6
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 3.2e-125 452.6 375 67.5
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 3.2e-125 452.6 377 69.8
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 9.2e-125 451.1 374 69.0
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 4.6e-124 448.7 378 68.5
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 6.0e-124 448.4 374 69.5
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.0e-123 447.6 377 67.4
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.3e-123 447.2 375 67.7
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 5.6e-122 441.8 386 65.3
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.6e-121 440.3 375 70.9
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 7.8e-116 421.4 365 65.8
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 6.6e-115 418.3 387 68.5
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.5e-106 389.8 387 61.8
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 3.7e-105 386.0 360 68.9
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 5.1e-99 365.5 402 56.2
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 3.7e-97 359.4 374 55.3
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 2.0e-95 353.6 401 56.4
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 6.0e-92 342.0 310 70.0
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 3.8e-86 322.8 257 77.8
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 3.6e-84 316.2 391 52.7
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 1.5e-82 310.8 267 67.4
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.2e-77 292.7 388 48.7
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 7.2e-77 292.0 246 70.3
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 2.3e-75 287.0 240 72.5
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 7.4e-74 282.0 233 72.5
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 7.7e-71 271.9 377 45.1
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.6e-68 264.2 241 71.0
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 4.7e-68 262.7 236 72.9
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 1.3e-65 254.6 234 68.4
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.7e-62 244.2 154 79.2
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 6.1e-60 235.7 163 79.8
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 6.1e-60 235.7 245 55.5
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.5e-58 231.1 240 59.6
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.7e-57 226.5 352 50.9
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 3.7e-57 226.5 128 86.7
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 6.3e-57 225.7 128 85.2
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 1.2e-52 211.5 128 83.6
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 2.1e-44 184.1 226 55.8
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.4e-40 169.5 140 76.4
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.0e-38 162.9 84 91.7
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 8.6e-38 162.2 163 60.7
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 4.7e-36 156.4 161 58.4
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 6.8e-35 152.5 125 75.2
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 6.8e-35 152.5 125 76.8
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 6.4e-33 146.0 317 41.3
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 3.5e-31 140.2 144 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 7.3e-29 132.5 418 32.8
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.6e-23 113.2 72 77.8
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 4.6e-23 113.2 285 33.7
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-21 108.2 66 81.8
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 9.5e-21 105.5 86 65.1
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 1.2e-20 105.1 87 67.8
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.4e-18 97.1 64 79.7
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.3e-14 85.1 354 31.1
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 3.6e-12 77.0 50 76.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 3.4e-10 70.5 293 30.4


User provided reference genes

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