Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1039 Trochodendron aralioides HOM05D006999 ORTHO05D008936 6.8e-311 1070.1 659 100.0
Nn5g29479 Nelumbo nucifera HOM05D006999 ORTHO05D008936 3.2e-207 725.7 659 67.4
Dinv39939 Davidia involucrata HOM05D006999 ORTHO05D008936 1.3e-195 687.2 655 61.1
Aqoxy6G01000 Aquilegia oxysepala HOM05D006999 ORTHO05D008936 4.5e-193 678.7 666 56.5
PSO541G6186 Papaver somniferum HOM05D006999 ORTHO05D008936 1.0e-189 667.5 641 56.2
Dinv29387 Davidia involucrata HOM05D006999 ORTHO05D008936 3.9e-181 639.0 631 56.4
GSVIVG01019040001 Vitis vinifera HOM05D006999 ORTHO05D008936 6.2e-179 631.7 654 52.8
CSS0009159 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 4.0e-178 629.0 661 54.5
CSS0003698 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 2.0e-177 626.7 661 54.3
Cc05_g07730 Coffea canephora HOM05D006999 ORTHO05D008936 8.4e-176 621.3 657 52.7
Prupe.7G147200 Prunus persica HOM05D006999 ORTHO05D008936 7.1e-175 618.2 658 59.0
QL06p044626 Quercus lobata HOM05D006999 ORTHO05D008936 9.3e-175 617.8 647 52.7
CiPaw.01G031400 Carya illinoinensis HOM05D006999 ORTHO05D008936 6.7e-173 611.7 657 52.1
RcHm_v2.0_Chr2g0102951 Rosa chinensis HOM05D006999 ORTHO05D008936 1.6e-171 607.1 659 51.4
CANSAT01G1763 Cannabis sativa HOM05D006999 ORTHO05D008936 1.5e-169 600.5 643 50.7
Nitab4.5_0000090g0200 Nicotiana tabacum HOM05D006999 ORTHO05D008936 1.7e-168 597.0 658 61.6
Oeu049321.1 Olea europaea HOM05D006999 ORTHO05D008936 2.1e-166 590.1 659 49.8
PGSC0003DMG400001186 Solanum tuberosum HOM05D006999 ORTHO05D008936 2.7e-166 589.7 654 56.4
Cpa.g.sc15.132 Carica papaya HOM05D006999 ORTHO05D008936 3.6e-166 589.3 660 49.1
Nitab4.5_0004292g0030 Nicotiana tabacum HOM05D006999 ORTHO05D008936 7.9e-166 588.2 658 60.9
MSTRG.15411 Avicennia marina HOM05D006999 ORTHO05D008936 1.4e-165 587.4 655 49.5
Peaxi162Scf00019g00154 Petunia axillaris HOM05D006999 ORTHO05D008936 1.4e-165 587.4 658 57.9
Oeu049309.1 Olea europaea HOM05D006999 ORTHO05D008936 6.7e-165 585.1 657 49.0
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 2.5e-164 583.2 653 64.9
Sopen02g015710 Solanum pennellii HOM05D006999 ORTHO05D008936 3.3e-164 582.8 654 56.0
Manes.13G134700 Manihot esculenta HOM05D006999 ORTHO05D008936 4.3e-164 582.4 644 50.5
FAN23G0790 Fragaria x ananassa HOM05D006999 ORTHO05D008936 9.7e-164 581.3 649 56.7
Lalb_Chr09g0322731 Lupinus albus HOM05D006999 ORTHO05D008936 8.2e-163 578.2 655 61.5
CAN.G93.18 Capsicum annuum HOM05D006999 ORTHO05D008936 1.1e-162 577.8 648 61.9
Rhsim02G0229300 Rhododendron simsii HOM05D006999 ORTHO05D008936 1.8e-162 577.0 661 61.6
arahy.Tifrunner.gnm1.ann1.ZB5P2M Arachis hypogaea HOM05D006999 ORTHO05D008936 3.1e-162 576.2 664 52.3
Solyc02g065510.1 Solanum lycopersicum HOM05D006999 ORTHO05D008936 6.9e-162 575.1 624 57.2
Thecc.01G043300 Theobroma cacao HOM05D006999 ORTHO05D008936 6.9e-162 575.1 641 49.8
Gohir.D12G067100 Gossypium hirsutum HOM05D006999 ORTHO05D008936 2.0e-161 573.5 641 49.6
Sabra05G0104700 Salix brachista HOM05D006999 ORTHO05D008936 2.0e-161 573.5 646 48.8
Cfa004253 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.0e-160 571.2 644 51.1
Migut.K00852 Erythranthe guttata HOM05D006999 ORTHO05D008936 1.3e-160 570.9 655 48.7
Gorai.008G070500 Gossypium raimondii HOM05D006999 ORTHO05D008936 5.0e-160 568.9 640 49.4
MD15G1270900 Malus domestica HOM05D006999 ORTHO05D008936 8.5e-160 568.2 641 49.9
DCAR_026261 Daucus carota HOM05D006999 ORTHO05D008936 1.4e-157 560.8 649 48.7
Potri.005G128600 Populus trichocarpa HOM05D006999 ORTHO05D008936 1.8e-157 560.5 647 48.4
TWI73G1021 Tripterygium wilfordii HOM05D006999 ORTHO05D008936 5.1e-157 558.9 641 58.7
Lj2g0003627 Lotus japonicus HOM05D006999 ORTHO05D008936 6.7e-157 558.5 650 48.8
Gohir.A12G066700 Gossypium hirsutum HOM05D006999 ORTHO05D008936 2.6e-156 556.6 646 48.0
SGA_v2.0_scaffold62G21537 Striga asiatica HOM05D006999 ORTHO05D008936 4.4e-156 555.8 629 49.9
Duzib147G0594 Durio zibethinus HOM05D006999 ORTHO05D008936 1.3e-155 554.3 654 48.5
Sc03g0001020 Simmondsia chinensis HOM05D006999 ORTHO05D008936 1.7e-155 553.9 658 54.4
Medtr5g019030 Medicago truncatula HOM05D006999 ORTHO05D008936 2.2e-155 553.5 638 62.4
FvH4_2g07140 Fragaria vesca HOM05D006999 ORTHO05D008936 1.1e-154 551.2 636 49.2
VMungo1215G1670 Vigna mungo HOM05D006999 ORTHO05D008936 1.1e-154 551.2 667 54.0
Phvul.002G025400 Phaseolus vulgaris HOM05D006999 ORTHO05D008936 1.4e-154 550.8 665 54.7
Ca_24822_v3 Cicer arietinum L. HOM05D006999 ORTHO05D008936 1.8e-154 550.4 646 52.5
vmacro00136 Vaccinium macrocarpon HOM05D006999 ORTHO05D008936 1.2e-153 547.7 663 56.3
SalBow1G0035 Salvia bowleyana HOM05D006999 ORTHO05D008936 1.0e-152 544.7 625 48.5
Glyma.11G063000 Glycine max HOM05D006999 ORTHO05D008936 2.9e-152 543.1 664 60.2
Aa31LG1G15180 Aethionema arabicum HOM05D006999 ORTHO05D008936 1.6e-150 537.3 657 45.4
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 3.6e-150 536.2 567 58.2
TPR.G34465 Trifolium pratense HOM05D006999 ORTHO05D008936 2.0e-148 530.4 665 54.0
Ciclev10027580m.g Citrus clementina HOM05D006999 ORTHO05D008936 7.7e-145 518.5 636 61.0
Eucgr.I02485 Eucalyptus grandis HOM05D006999 ORTHO05D008936 7.7e-145 518.5 663 52.5
ECA232G3871 Erigeron canadensis HOM05D006999 ORTHO05D008936 2.9e-144 516.5 632 53.0
AT5G66631 Arabidopsis thaliana HOM05D006999 ORTHO05D008936 1.9e-143 513.8 653 45.8
Sp2g30070 Schrenkiella parvula HOM05D006999 ORTHO05D008936 2.3e-141 506.9 649 44.4
THA.LOC104826827 Tarenaya hassleriana HOM05D006999 ORTHO05D008936 2.3e-141 506.9 652 44.6
Actinidia36538 Actinidia chinensis HOM05D006999 ORTHO05D008936 1.2e-140 504.6 664 52.1
Lj4P134T41 Lonicera japonica HOM05D006999 ORTHO05D008936 2.8e-139 500.0 518 51.7
CARHR281110 Cardamine hirsuta HOM05D006999 ORTHO05D008936 3.1e-138 496.5 650 44.2
BcaB02g10006 Brassica carinata HOM05D006999 ORTHO05D008936 4.1e-138 496.1 659 44.6
Thhalv10005592m.g Eutrema salsugineum HOM05D006999 ORTHO05D008936 2.0e-137 493.8 652 44.9
AL8G44870 Arabidopsis lyrata HOM05D006999 ORTHO05D008936 5.9e-137 492.3 653 44.1
HanXRQChr09g0265111 Helianthus annuus HOM05D006999 ORTHO05D008936 5.9e-137 492.3 656 50.2
Psat2g162640 Pisum sativum HOM05D006999 ORTHO05D008936 1.0e-136 491.5 636 58.3
A07p17310 Brassica napus HOM05D006999 ORTHO05D008936 6.5e-136 488.8 646 44.4
BraA07t29457Z Brassica rapa HOM05D006999 ORTHO05D008936 2.5e-135 486.9 643 44.0
BcaC06g34726 Brassica carinata HOM05D006999 ORTHO05D008936 1.2e-134 484.6 658 43.6
Atru.chr3.494 Acer truncatum HOM05D006999 ORTHO05D008936 1.4e-133 481.1 504 54.8
BolC7t43049H Brassica oleracea HOM05D006999 ORTHO05D008936 4.0e-133 479.6 657 43.2
EL10Ac6g14872 Beta vulgaris HOM05D006999 ORTHO05D008936 1.2e-132 478.0 653 56.7
Oeu049317.1 Olea europaea HOM05D006999 ORTHO05D008936 1.7e-131 474.2 548 48.4
HPP92_025826 Vanilla planifolia HOM05D006999 ORTHO05D008936 4.1e-130 469.5 629 44.2
FvH4_1g14280 Fragaria vesca HOM05D006999 ORTHO05D008936 1.0e-128 464.9 512 49.4
AUR62008030 Chenopodium quinoa HOM05D006999 ORTHO05D008936 6.6e-128 462.2 650 48.0
RcHm_v2.0_Chr2g0102871 Rosa chinensis HOM05D006999 ORTHO05D008936 2.1e-126 457.2 514 50.6
Ah.02g126330 Amaranthus hybridus HOM05D006999 ORTHO05D008936 2.3e-125 453.8 650 47.7
Haze_15147 Corylus avellana HOM05D000909 ORTHO05D000928 4.4e-124 449.5 653 43.0
Carub.0008s2788 Capsella rubella HOM05D006999 ORTHO05D008936 9.5e-119 431.8 512 45.9
CDE01G0819 Ceratophyllum demersum HOM05D006999 ORTHO05D008936 1.6e-118 431.0 633 40.4
C07p25190 Brassica napus HOM05D006999 ORTHO05D008936 6.4e-115 419.1 537 44.3
Os01g0167750 Oryza sativa ssp. japonica HOM05D006999 ORTHO05D008936 2.3e-109 400.6 653 42.7
Zm00001eb123240 Zea mays HOM05D006999 ORTHO05D008936 2.7e-105 387.1 626 46.5
ATR0782G111 Amborella trichopoda HOM05D006999 ORTHO05D008936 7.8e-105 385.6 683 36.7
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 7.8e-105 385.6 549 43.9
Dinv18613 Davidia involucrata HOM05D006999 ORTHO05D008936 7.3e-103 379.0 687 38.6
Dinv26229 Davidia involucrata HOM05D006999 ORTHO05D008936 7.3e-103 379.0 687 38.6
SEGI_35610 Sequoiadendron giganteum HOM05D006999 ORTHO05D008936 1.9e-95 354.4 664 42.5
Haze_25752 Corylus avellana HOM05D006999 ORTHO05D008936 4.2e-82 310.1 676 34.2
Cfa021547 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.3e-75 288.5 663 35.6
unitig_748.g8403 Utricularia gibba HOM05D006999 ORTHO05D008936 6.7e-72 276.2 386 41.7
Cfa003411 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.7e-59 235.0 665 33.5
Glyma.01G179201 Glycine max HOM05D006999 ORTHO05D008936 1.5e-55 221.9 216 75.5
unitig_748.g8404 Utricularia gibba HOM05D006999 ORTHO05D008936 2.0e-52 211.5 236 49.2
Glyma.01G179251 Glycine max HOM05D006999 ORTHO05D008936 9.4e-34 149.4 217 45.2
COL.COLO4_22153 Corchorus olitorius HOM05D000225 ORTHO05D003554 6.3e-30 136.7 192 43.2
FAN28G3023 Fragaria x ananassa HOM05D006999 ORTHO05D008936 2.0e-28 131.7 182 41.2
Actinidia12102 Actinidia chinensis HOM05D006999 ORTHO05D008936 4.5e-28 130.6 154 48.7
Aa31LG1G15170 Aethionema arabicum HOM05D000909 ORTHO05D008936 4.4e-23 114.0 152 45.4
HanXRQChr09g0268161 Helianthus annuus HOM05D006999 ORTHO05D008936 4.1e-21 107.5 148 41.2
MD02G1156600 Malus domestica HOM05D006999 ORTHO05D008936 2.0e-12 78.6 157 34.4
Pp3c4_14140 Physcomitrium patens HOM05D006999 ORTHO05D008936 1.4e-08 65.9 172 26.7
EL10Ac6g14214 Beta vulgaris HOM05D006999 ORTHO05D008936 8.9e-08 63.2 155 30.3
ATR1149G109 Amborella trichopoda HOM05D007202 ORTHO05D009125 1.5e-07 62.4 173 30.1
AagrBONN_evm.TU.Sc2ySwM_344.143 Anthoceros agrestis HOM05D004079 ORTHO05D008936 4.4e-07 60.8 131 29.8
ECA238G2420 Erigeron canadensis HOM05D006596 ORTHO05D008497 1.7e-06 58.9 171 29.2
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 1.7e-06 58.9 160 25.6
SEGI_11175 Sequoiadendron giganteum HOM05D007202 ORTHO05D009125 1.7e-06 58.9 158 29.1
Cpa.g.sc193.15 Carica papaya HOM05D002391 ORTHO05D003966 2.9e-06 58.2 142 30.3
ECA248G1043 Erigeron canadensis HOM05D000001 ORTHO05D000003 3.7e-06 57.8 139 28.8
ATR0712G074 Amborella trichopoda HOM05D007202 ORTHO05D009125 6.4e-06 57.0 173 28.9
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 6.4e-06 57.0 170 27.6
FvH4_1g14250 Fragaria vesca HOM05D000909 ORTHO05D000928 6.4e-06 57.0 168 28.6
MBI19_g17402_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D002854 8.3e-06 56.6 213 27.2


User provided reference genes

Program Settings