Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.5e-121 439.5 218 100.0
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.6e-91 338.6 184 92.4
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.2e-81 307.0 184 82.6
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 3.0e-77 292.4 184 77.7
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 4.4e-73 278.5 184 73.4
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.1e-71 273.9 185 72.4
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 4.2e-71 271.9 184 72.8
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 2.7e-70 269.2 186 72.0
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.7e-70 269.2 185 73.0
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 4.6e-70 268.5 193 72.0
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 6.0e-70 268.1 157 81.5
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 7.8e-70 267.7 185 72.4
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 2.3e-69 266.2 206 68.0
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 3.9e-69 265.4 185 73.5
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 1.1e-68 263.8 193 69.4
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 1.9e-68 263.1 185 69.7
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 9.6e-68 260.8 185 71.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.3e-67 260.4 186 69.4
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 1.3e-67 260.4 185 70.8
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 2.1e-67 259.6 193 66.3
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 2.8e-67 259.2 186 71.0
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 8.1e-67 257.7 187 71.7
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.1e-66 257.3 186 68.3
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 1.4e-66 256.9 185 70.3
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.8e-66 256.5 186 68.3
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 4.0e-66 255.4 185 70.3
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 5.3e-66 255.0 190 69.5
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.2e-65 253.8 185 69.7
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 1.2e-65 253.8 186 71.0
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 1.5e-65 253.4 190 68.9
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.4e-65 252.3 186 66.7
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 7.6e-65 251.1 185 67.6
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 7.6e-65 251.1 186 70.4
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.3e-64 250.4 185 68.1
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.7e-64 250.0 186 67.7
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 2.2e-64 249.6 184 64.7
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 2.2e-64 249.6 186 65.6
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 2.9e-64 249.2 184 64.1
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 2.9e-64 249.2 187 67.4
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 2.9e-64 249.2 185 68.1
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 6.4e-64 248.1 184 64.1
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 8.4e-64 247.7 186 64.5
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.9e-63 246.5 185 65.9
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.9e-63 246.5 184 66.3
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 2.4e-63 246.1 187 65.8
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 3.2e-63 245.7 185 65.9
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 4.2e-63 245.4 199 62.8
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 9.3e-63 244.2 185 63.8
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.1e-62 243.0 185 66.5
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 2.1e-62 243.0 185 65.9
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 2.7e-62 242.7 187 64.7
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 3.5e-62 242.3 185 65.9
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 3.5e-62 242.3 192 63.0
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 4.6e-62 241.9 188 63.3
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.6e-62 241.9 186 66.7
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 7.9e-62 241.1 185 65.9
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 7.9e-62 241.1 187 64.2
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 7.9e-62 241.1 185 63.8
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.0e-61 240.7 189 66.1
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.3e-61 240.4 185 65.4
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 5.1e-61 238.4 185 65.4
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.1e-60 237.3 184 65.8
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 1.6e-59 233.4 188 61.7
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 1.6e-59 233.4 184 63.0
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 2.1e-59 233.0 184 65.2
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 2.8e-59 232.6 186 62.9
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 3.6e-59 232.3 184 62.5
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 4.8e-59 231.9 185 61.1
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.8e-58 229.9 184 63.6
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 1.8e-58 229.9 184 63.6
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.8e-58 229.9 185 61.6
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 5.3e-58 228.4 185 62.7
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 5.3e-58 228.4 185 62.7
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.2e-57 227.3 189 64.0
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 1.5e-57 226.9 185 62.7
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 3.4e-57 225.7 186 65.6
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 4.5e-57 225.3 184 61.4
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 7.6e-57 224.6 185 61.6
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 9.9e-57 224.2 196 62.2
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 1.3e-56 223.8 186 62.4
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 2.2e-56 223.0 197 58.4
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 2.9e-56 222.6 185 61.1
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 3.8e-56 222.2 158 69.0
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 4.9e-56 221.9 186 61.8
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 4.9e-56 221.9 186 61.8
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 4.9e-56 221.9 185 61.1
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 1.2e-54 217.2 164 61.0
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 2.7e-54 216.1 185 58.4
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 1.0e-53 214.2 198 57.1
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.0e-53 214.2 188 57.4
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 5.1e-53 211.8 189 55.0
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 8.7e-53 211.1 186 61.3
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 8.7e-53 211.1 218 52.8
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.1e-52 210.7 189 55.0
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.6e-51 206.8 184 58.7
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 2.1e-51 206.5 160 64.4
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 8.1e-51 204.5 160 63.8
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 2.4e-50 203.0 188 56.4
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 4.2e-47 192.2 140 69.3
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 5.5e-47 191.8 184 54.9
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 1.6e-46 190.3 155 62.6
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.0e-45 187.6 184 53.3
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 3.0e-45 186.0 161 62.1
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.1e-42 177.6 164 58.5
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.4e-41 172.6 135 65.2
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.8e-40 169.1 134 63.4
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 6.5e-40 168.3 188 48.4
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 4.6e-38 162.2 192 47.4
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 5.7e-36 155.2 188 47.9
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 4.8e-35 152.1 131 62.6
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 3.2e-31 139.4 139 53.2
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 2.6e-28 129.8 93 63.4
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 4.4e-28 129.0 184 44.0
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 9.7e-28 127.9 164 49.4
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.3e-27 127.5 160 48.1
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 4.8e-27 125.6 86 70.9
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 2.0e-25 120.2 109 64.2
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 1.7e-24 117.1 83 66.3
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 2.9e-24 116.3 184 42.4
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 6.5e-24 115.2 86 64.0
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.3e-19 100.9 200 33.5
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 3.3e-12 76.3 109 48.6
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 1.5e-07 60.8 87 49.4
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 1.5e-07 60.8 87 49.4


User provided reference genes

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