Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 3.3e-48 195.3 147 100.0
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 8.8e-25 117.5 94 75.5
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 4.4e-24 115.2 94 74.5
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 5.7e-24 114.8 94 85.1
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 2.2e-23 112.8 94 75.5
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 3.7e-23 112.1 78 89.7
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 6.3e-23 111.3 92 84.8
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.1e-22 110.5 92 80.4
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 1.1e-22 110.5 92 77.2
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.8e-22 109.8 78 84.6
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 1.8e-22 109.8 96 70.8
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 5.4e-22 108.2 78 80.8
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 1.2e-21 107.1 94 78.7
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.2e-21 107.1 94 74.5
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-21 106.7 94 78.7
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 2.7e-21 105.9 79 79.7
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 3.5e-21 105.5 77 79.2
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 5.9e-21 104.8 79 81.0
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 7.7e-21 104.4 96 77.1
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 7.7e-21 104.4 95 81.1
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 1.0e-20 104.0 94 70.2
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.0e-20 104.0 79 81.0
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 1.0e-20 104.0 90 72.2
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 1.3e-20 103.6 94 73.4
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 1.3e-20 103.6 94 73.4
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.7e-20 103.2 79 79.7
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 2.3e-20 102.8 92 79.3
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.9e-20 102.4 76 81.6
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 2.9e-20 102.4 79 77.2
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 3.8e-20 102.1 78 76.9
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 5.0e-20 101.7 78 76.9
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 5.0e-20 101.7 98 73.5
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 6.6e-20 101.3 74 82.4
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.1e-19 100.5 94 67.0
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 1.5e-19 100.1 76 80.3
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.5e-19 100.1 79 78.5
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 2.5e-19 99.4 77 80.5
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 2.5e-19 99.4 79 77.2
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 2.5e-19 99.4 91 79.1
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 5.5e-19 98.2 94 69.1
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.6e-18 96.7 92 75.0
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.6e-18 96.7 79 75.9
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.8e-18 95.9 93 76.3
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.8e-18 95.9 73 78.1
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 6.1e-18 94.7 78 74.4
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 8.0e-18 94.4 94 67.0
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 8.0e-18 94.4 94 66.0
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 1.0e-17 94.0 94 75.5
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.4e-17 93.6 77 76.6
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 1.8e-17 93.2 77 76.6
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 1.8e-17 93.2 77 76.6
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 2.3e-17 92.8 77 75.3
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 2.3e-17 92.8 77 75.3
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.3e-17 92.8 87 67.8
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 2.3e-17 92.8 94 71.3
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 3.0e-17 92.4 92 77.2
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.2e-16 90.5 94 62.8
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 2.6e-16 89.4 89 66.3
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 5.7e-16 88.2 76 73.7
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.2e-15 86.3 80 63.8
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 6.3e-15 84.7 92 66.3
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 1.4e-14 83.6 78 67.9
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.8e-14 83.2 77 71.4
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 5.4e-14 81.6 74 78.4
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 5.4e-14 81.6 83 63.9
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 7.0e-14 81.3 93 68.8
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 9.2e-14 80.9 73 72.6
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 1.7e-12 76.6 76 65.8
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 3.8e-12 75.5 76 67.1
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 8.6e-12 74.3 93 64.5
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 4.3e-11 72.0 93 58.1
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 5.6e-11 71.6 92 64.1
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 7.3e-11 71.2 78 61.5
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.6e-10 70.1 78 62.8
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 2.1e-10 69.7 96 66.7
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 4.7e-10 68.6 56 69.6
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 3.1e-09 65.9 93 62.4
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 4.0e-09 65.5 89 61.8
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 5.2e-09 65.1 62 61.3
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 6.8e-09 64.7 72 63.9
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.2e-07 59.7 71 56.3
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.9e-06 56.6 96 52.1
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 4.1e-06 55.5 76 53.9
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 5.4e-06 55.1 42 73.8
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.4e-06 55.1 45 77.8
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 5.4e-06 55.1 45 73.3
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 5.4e-06 55.1 42 71.4


User provided reference genes

Program Settings