Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0904 Trochodendron aralioides HOM05D008201 ORTHO05D005639 3.9e-70 268.9 241 100.0
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 3.2e-24 116.3 234 55.6
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 3.2e-16 89.7 186 62.9
TAR381G0320 Trochodendron aralioides HOM05D008201 ORTHO05D005639 9.4e-16 88.2 110 50.0
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 3.7e-12 76.3 211 56.9
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 5.9e-10 68.9 202 42.6
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 1.3e-09 67.8 65 67.7
Sed0012310 Sechium edule HOM05D024756 ORTHO05D005639 2.2e-09 67.0 193 59.6
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 2.9e-09 66.6 243 56.8
QL11p053458 Quercus lobata HOM05D021524 ORTHO05D013106 5.0e-09 65.9 73 49.3
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 1.5e-08 64.3 220 53.6
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 1.9e-08 63.9 204 55.4
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 4.2e-08 62.8 249 63.9
Gorai.002G119600 Gossypium raimondii HOM05D008201 ORTHO05D005639 2.7e-07 60.1 203 43.3
Gohir.D01G094300 Gossypium hirsutum HOM05D008201 ORTHO05D005639 3.6e-07 59.7 203 41.4
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.7e-07 59.3 201 43.3
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 6.1e-07 58.9 243 50.6
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 8.0e-07 58.5 185 38.9
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.0e-06 58.2 277 49.1
Ciclev10029952m.g Citrus clementina HOM05D021524 ORTHO05D013106 3.0e-06 56.6 58 55.2
Haze_02059 Corylus avellana HOM05D021524 ORTHO05D013106 4.0e-06 56.2 61 50.8
Glyma.06G009350 Glycine max HOM05D015205 ORTHO05D005639 4.0e-06 56.2 82 51.2
Atru.chr5.3486 Acer truncatum HOM05D021524 ORTHO05D013106 5.2e-06 55.8 63 54.0
A07p28610 Brassica napus HOM05D008570 ORTHO05D005639 5.2e-06 55.8 65 55.4
Lalb_Chr19g0131701 Lupinus albus HOM05D008201 ORTHO05D005639 5.2e-06 55.8 104 40.4
Cfa014040 Carpinus fangiana HOM05D025300 ORTHO05D005639 6.8e-06 55.5 68 54.4
FAN20G0338 Fragaria x ananassa HOM05D008201 ORTHO05D005639 8.8e-06 55.1 62 54.8


User provided reference genes

Program Settings