Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 2.9e-210 734.9 368 100.0
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 1.3e-130 470.3 373 65.4
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 1.4e-119 433.7 368 62.8
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 1.0e-109 401.0 325 64.6
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 2.9e-109 399.4 327 62.7
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 1.4e-103 380.6 365 57.3
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 2.2e-101 373.2 359 57.4
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 3.2e-100 369.4 366 58.7
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 7.0e-95 351.7 355 54.6
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 1.1e-87 327.8 359 51.0
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 7.0e-87 325.1 292 58.9
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 1.5e-84 317.4 292 58.2
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 4.5e-70 269.2 190 71.6
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 5.0e-69 265.8 251 58.2
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 8.6e-69 265.0 183 72.7
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 2.8e-67 260.0 208 65.9
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 1.4e-66 257.7 203 64.0
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 3.1e-66 256.5 243 55.1
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 6.8e-66 255.4 190 68.9
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 8.9e-66 255.0 206 63.1
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 1.3e-64 251.1 191 67.5
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.3e-64 251.1 208 60.1
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 2.9e-64 250.0 189 69.3
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 4.9e-64 249.2 208 59.6
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 9.2e-63 245.0 204 60.8
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 1.2e-62 244.6 208 63.0
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 1.3e-61 241.1 188 63.3
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 3.0e-61 240.0 459 36.4
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 3.6e-59 233.0 203 63.1
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 8.0e-59 231.9 210 60.0
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.6e-57 226.9 208 57.2
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 4.4e-57 226.1 192 63.0
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 6.4e-56 222.2 170 69.4
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 5.4e-55 219.2 174 64.4
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 7.1e-47 192.2 175 59.4
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 3.0e-45 186.8 150 64.0
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 3.9e-45 186.4 273 44.0
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 2.4e-42 177.2 162 53.1
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 3.5e-38 163.3 206 42.7
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 1.0e-37 161.8 185 43.2
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 2.1e-35 154.1 198 50.0
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 1.1e-34 151.8 96 75.0
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 2.0e-33 147.5 131 60.3
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 3.9e-29 133.3 133 52.6
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 3.4e-25 120.2 125 48.8
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 2.2e-24 117.5 198 40.9
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 5.4e-23 112.8 89 61.8
Duzib041G0488 Durio zibethinus HOM05D008523 ORTHO05D010723 7.1e-23 112.5 98 58.2
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 9.3e-23 112.1 92 58.7
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 3.5e-22 110.2 166 44.0
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 1.9e-20 104.4 99 55.6
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 4.8e-19 99.8 121 46.3
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.4e-18 97.4 153 41.8
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 3.8e-16 90.1 134 35.1
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 3.5e-14 83.6 183 34.4
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 4.6e-14 83.2 105 42.9
Nitab4.5_0029384g0020 Nicotiana tabacum HOM05D008523 ORTHO05D010723 2.9e-08 63.9 140 35.0


User provided reference genes

Program Settings