Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.9e-133 479.2 241 100.0
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.6e-119 433.0 255 87.5
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 2.6e-106 389.0 255 76.1
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 3.4e-106 388.7 254 77.6
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.7e-105 386.3 255 75.7
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 3.7e-105 385.2 255 74.9
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.7e-105 385.2 242 77.3
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 3.7e-105 385.2 255 75.3
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 3.7e-105 385.2 255 75.7
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 8.3e-105 384.0 255 76.1
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 8.3e-105 384.0 255 75.3
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 1.4e-104 383.3 248 76.6
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 2.4e-104 382.5 255 73.7
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.4e-104 382.5 255 74.9
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.4e-104 382.5 255 74.9
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.4e-104 382.5 255 74.5
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 4.1e-104 381.7 255 74.5
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 4.1e-104 381.7 255 74.5
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 5.4e-104 381.3 252 73.8
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 7.0e-104 380.9 255 74.9
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 9.2e-104 380.6 255 73.3
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.2e-103 380.2 255 73.3
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 1.6e-103 379.8 255 72.9
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 1.6e-103 379.8 255 74.1
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 2.7e-103 379.0 255 74.1
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 7.8e-103 377.5 255 74.5
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 1.0e-102 377.1 255 74.5
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 1.3e-102 376.7 255 73.3
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 1.3e-102 376.7 255 74.5
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 1.7e-102 376.3 255 73.3
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 2.3e-102 375.9 255 73.7
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 3.0e-102 375.6 255 72.9
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 3.0e-102 375.6 255 74.1
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 3.0e-102 375.6 255 74.5
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 3.9e-102 375.2 253 76.3
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 6.6e-102 374.4 236 76.7
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 1.1e-101 373.6 255 73.3
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 1.1e-101 373.6 255 72.9
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 1.5e-101 373.2 253 73.9
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.5e-101 373.2 255 71.4
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.5e-101 373.2 255 72.9
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.5e-101 373.2 255 72.9
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 1.5e-101 373.2 253 75.9
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.5e-101 372.5 253 73.5
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 2.5e-101 372.5 252 72.6
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 5.6e-101 371.3 255 71.0
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 7.3e-101 370.9 255 72.5
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 7.3e-101 370.9 255 72.5
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 9.5e-101 370.5 255 72.2
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.6e-100 369.8 255 72.9
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 2.1e-100 369.4 255 70.6
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 2.1e-100 369.4 248 72.6
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 2.1e-100 369.4 255 71.0
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 4.7e-100 368.2 255 71.0
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 8.0e-100 367.5 255 72.2
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 1.0e-99 367.1 255 71.8
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 1.4e-99 366.7 255 70.6
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 1.8e-99 366.3 255 70.2
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 2.3e-99 365.9 248 73.8
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 2.3e-99 365.9 255 71.0
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 2.3e-99 365.9 255 72.2
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 3.1e-99 365.5 255 71.8
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 3.1e-99 365.5 255 71.4
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 5.2e-99 364.8 248 72.2
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 8.9e-99 364.0 248 72.2
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 2.6e-98 362.5 255 71.0
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 2.6e-98 362.5 255 71.4
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 2.6e-98 362.5 255 69.0
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 3.4e-98 362.1 259 70.3
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 4.4e-98 361.7 255 71.0
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 4.4e-98 361.7 248 73.4
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 5.8e-98 361.3 255 70.2
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 5.8e-98 361.3 255 69.4
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 7.5e-98 360.9 255 71.0
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 7.5e-98 360.9 255 70.2
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 7.5e-98 360.9 255 70.2
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 9.8e-98 360.5 241 75.1
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 9.8e-98 360.5 248 71.0
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 1.3e-97 360.1 255 70.6
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.7e-97 359.8 255 71.0
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 1.7e-97 359.8 255 69.4
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 1.7e-97 359.8 241 75.5
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 2.2e-97 359.4 255 70.6
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 3.7e-97 358.6 255 69.8
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 3.7e-97 358.6 255 69.8
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 3.7e-97 358.6 248 71.4
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 1.9e-96 356.3 255 69.4
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 9.2e-96 354.0 248 72.2
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 1.5e-93 346.7 247 68.4
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.9e-93 346.3 248 71.0
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 7.3e-93 344.4 255 70.2
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 7.3e-93 344.4 256 68.4
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 9.5e-93 344.0 255 67.8
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 8.1e-92 340.9 255 69.8
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.1e-91 340.5 255 67.5
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 1.5e-90 336.7 235 72.8
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 2.6e-90 335.9 241 72.2
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 9.2e-88 327.4 344 53.5
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 3.3e-85 318.9 215 74.4
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 3.6e-84 315.5 215 75.3
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 4.1e-80 302.0 257 63.4
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.0e-78 295.8 235 66.8
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 6.4e-73 278.1 255 58.0
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 2.7e-71 272.7 175 77.7
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 2.0e-66 256.5 234 54.7
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 3.2e-64 249.2 248 52.0
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 3.3e-61 239.2 264 49.2
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 9.6e-61 237.7 234 53.0
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.4e-59 233.8 232 52.2
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 2.2e-57 226.5 255 52.5
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 6.2e-52 208.4 149 71.1
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 1.4e-48 197.2 240 48.3
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 1.6e-39 167.2 261 41.0
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 2.1e-39 166.8 155 56.8
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.5e-37 160.6 151 58.9
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 1.9e-37 160.2 150 58.0
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 3.3e-37 159.5 150 58.7
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 9.7e-37 157.9 271 37.6
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.0e-33 145.6 182 50.5
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 3.6e-31 139.4 83 79.5
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.0e-30 136.3 169 49.1
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 9.4e-24 114.8 285 31.9
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.0e-18 97.1 58 82.8
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.8e-17 92.8 60 75.0
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 1.5e-16 90.9 56 78.6
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 1.6e-15 87.4 71 57.7
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 7.0e-11 72.0 80 45.0


User provided reference genes

Program Settings