Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 5.3e-59 231.1 141 100.0
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 1.9e-37 159.5 132 62.1
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 1.9e-37 159.5 134 65.7
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 2.5e-37 159.1 141 60.3
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 7.4e-37 157.5 141 60.3
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 9.6e-37 157.1 130 65.4
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 9.6e-37 157.1 134 64.9
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 9.6e-37 157.1 134 64.9
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 2.8e-36 155.6 144 57.6
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 8.2e-36 154.1 141 56.7
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 3.1e-35 152.1 134 61.2
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 4.1e-35 151.8 144 57.6
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 5.3e-35 151.4 144 57.6
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 6.9e-35 151.0 138 58.7
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 6.9e-35 151.0 144 56.9
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 6.9e-35 151.0 144 56.9
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 1.5e-34 149.8 141 56.7
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 1.5e-34 149.8 140 57.1
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 2.0e-34 149.4 123 64.2
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 2.6e-34 149.1 135 60.7
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 4.5e-34 148.3 135 57.0
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 5.9e-34 147.9 141 56.7
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 7.6e-34 147.5 141 57.4
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 1.7e-33 146.4 128 63.3
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 1.7e-33 146.4 135 59.3
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 1.7e-33 146.4 122 59.8
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 2.2e-33 146.0 128 61.7
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 2.2e-33 146.0 128 61.7
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 2.2e-33 146.0 136 56.6
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 2.9e-33 145.6 133 60.9
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 5.0e-33 144.8 131 58.0
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 8.5e-33 144.1 128 61.7
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 8.5e-33 144.1 128 61.7
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 1.1e-32 143.7 133 56.4
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 1.4e-32 143.3 143 54.5
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 1.9e-32 142.9 128 57.8
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 2.5e-32 142.5 130 60.0
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 3.2e-32 142.1 128 60.9
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 3.2e-32 142.1 128 60.9
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 3.2e-32 142.1 127 60.6
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 4.2e-32 141.7 143 56.6
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 4.2e-32 141.7 135 58.5
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 5.5e-32 141.4 119 62.2
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 9.3e-32 140.6 127 60.6
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 1.2e-31 140.2 135 57.8
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 1.2e-31 140.2 116 61.2
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 1.6e-31 139.8 98 75.5
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 1.6e-31 139.8 123 57.7
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 2.7e-31 139.0 137 56.2
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 2.7e-31 139.0 139 56.8
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 2.7e-31 139.0 123 57.7
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 4.6e-31 138.3 133 57.1
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 4.6e-31 138.3 116 62.1
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 6.1e-31 137.9 129 57.4
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 1.0e-30 137.1 128 60.9
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 1.8e-30 136.3 138 55.8
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 5.1e-30 134.8 132 56.8
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 6.7e-30 134.4 134 55.2
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 6.7e-30 134.4 128 54.7
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 1.1e-29 133.7 135 55.6
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 1.5e-29 133.3 116 60.3
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 1.9e-29 132.9 129 53.5
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 3.3e-29 132.1 129 58.9
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 3.3e-29 132.1 135 54.8
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.3e-29 131.7 139 54.7
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 4.3e-29 131.7 135 56.3
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 9.7e-29 130.6 92 71.7
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 9.7e-29 130.6 126 57.1
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 1.3e-28 130.2 140 52.1
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 1.3e-28 130.2 143 54.5
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 1.6e-28 129.8 128 55.5
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 2.2e-28 129.4 129 55.0
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 2.8e-28 129.0 131 54.2
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 2.8e-28 129.0 105 64.8
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 3.7e-28 128.6 150 61.3
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 8.2e-28 127.5 97 66.0
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 8.2e-28 127.5 137 53.3
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.1e-27 127.1 137 54.0
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 1.8e-27 126.3 100 65.0
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 2.4e-27 125.9 123 52.0
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 2.4e-27 125.9 140 51.4
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.1e-27 125.2 145 51.7
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 3.4e-26 122.1 118 55.1
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 4.5e-26 121.7 95 67.4
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 2.9e-25 119.0 108 57.4
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 6.5e-25 117.9 119 54.6
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 1.1e-24 117.1 106 56.6
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 2.5e-24 115.9 131 52.7
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 1.2e-23 113.6 109 56.9
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 4.6e-23 111.7 100 57.0
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 6.1e-23 111.3 117 54.7
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 3.0e-22 109.0 126 49.2
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 3.0e-22 109.0 92 57.6
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 7.4e-21 104.4 75 66.7
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 4.1e-19 98.6 93 59.1
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 1.6e-15 86.7 134 45.5
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 2.6e-13 79.3 121 38.0
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 2.0e-10 69.7 41 73.2
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 1.3e-09 67.0 88 39.8
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 1.5e-08 63.5 83 39.8
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 1.5e-08 63.5 83 39.8
CDE04G1622 Ceratophyllum demersum HOM05D002489 ORTHO05D002653 6.7e-06 54.7 77 37.7
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 6.7e-06 54.7 64 39.1


User provided reference genes

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