Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0842 Trochodendron aralioides HOM05D000830 ORTHO05D002187 8.8e-84 313.5 154 100.0
Nn5g27108 Nelumbo nucifera HOM05D000830 ORTHO05D002187 8.6e-31 137.5 195 47.2
Manes.06G015700 Manihot esculenta HOM05D000830 ORTHO05D002187 2.5e-30 136.0 187 47.1
Aqoxy6G00010 Aquilegia oxysepala HOM05D000830 ORTHO05D002187 1.6e-29 133.3 183 49.7
Hma1.2p1_0157F.1_g069310 Hydrangea macrophylla HOM05D000830 ORTHO05D002187 4.4e-27 125.2 184 45.1
DCAR_022322 Daucus carota HOM05D000830 ORTHO05D002187 9.9e-27 124.0 175 45.1
Ciclev10003316m.g Citrus clementina HOM05D000830 ORTHO05D002187 5.4e-25 118.2 181 45.3
Nitab4.5_0001085g0060 Nicotiana tabacum HOM05D000830 ORTHO05D002187 9.3e-25 117.5 176 43.8
HPP92_004510 Vanilla planifolia HOM05D000830 ORTHO05D002187 2.7e-24 115.9 169 41.4
Cc02_g23850 Coffea canephora HOM05D000830 ORTHO05D002187 6.0e-24 114.8 201 40.3
MBI03_g28953_MAGBIO Magnolia biondii HOM05D000830 ORTHO05D002187 2.3e-23 112.8 174 42.0
Rhsim11G0114500 Rhododendron simsii HOM05D000830 ORTHO05D002187 3.0e-23 112.5 197 42.6
Peaxi162Scf00194g00098 Petunia axillaris HOM05D000830 ORTHO05D002187 1.9e-22 109.8 200 39.0
Potri.004G231100 Populus trichocarpa HOM05D000830 ORTHO05D002187 1.9e-22 109.8 176 43.2
Atru.chr6.69 Acer truncatum HOM05D000830 ORTHO05D002187 3.3e-22 109.0 186 42.5
Glyma.15G125000 Glycine max HOM05D000830 ORTHO05D002187 3.3e-22 109.0 184 40.8
Nitab4.5_0006947g0010 Nicotiana tabacum HOM05D000830 ORTHO05D002187 7.3e-22 107.8 179 41.3
HPP92_004553 Vanilla planifolia HOM05D000830 ORTHO05D002187 9.6e-22 107.5 161 39.8
Phvul.006G133100 Phaseolus vulgaris HOM05D000830 ORTHO05D002187 2.1e-21 106.3 169 42.0
PGR042G1470 Punica granatum HOM05D000830 ORTHO05D002187 2.1e-21 106.3 182 42.3
Glyma.09G019000 Glycine max HOM05D000830 ORTHO05D002187 6.2e-21 104.8 183 39.3
Lj6g0004650 Lotus japonicus HOM05D000830 ORTHO05D002187 4.0e-20 102.1 175 38.9
TPR.G17500 Trifolium pratense HOM05D000830 ORTHO05D002187 4.0e-20 102.1 180 37.8
Medtr2g028610 Medicago truncatula HOM05D000830 ORTHO05D002187 5.3e-20 101.7 181 39.2
VMungo0540G1753 Vigna mungo HOM05D000830 ORTHO05D002187 5.3e-20 101.7 170 42.4
Ca_11363_v3 Cicer arietinum L. HOM05D000830 ORTHO05D002187 9.0e-20 100.9 148 43.2
Eucgr.G00044 Eucalyptus grandis HOM05D000830 ORTHO05D002187 1.4e-17 93.6 180 37.8
Duzib235G0950 Durio zibethinus HOM05D000830 ORTHO05D002187 3.2e-17 92.4 184 38.0
Medtr2g028590 Medicago truncatula HOM05D000830 ORTHO05D002187 3.2e-17 92.4 146 40.4
QL02p103834 Quercus lobata HOM05D000830 ORTHO05D002187 9.3e-17 90.9 140 47.1
CDE05G1272 Ceratophyllum demersum HOM05D000830 ORTHO05D002187 1.2e-16 90.5 138 45.7
Lalb_Chr20g0119841 Lupinus albus HOM05D000830 ORTHO05D002187 1.6e-16 90.1 138 42.8
Gorai.010G194500 Gossypium raimondii HOM05D000830 ORTHO05D002187 3.9e-15 85.5 179 36.9
Zm00001eb081850 Zea mays HOM05D000830 ORTHO05D002187 8.7e-15 84.3 123 39.8
Eucgr.G00045 Eucalyptus grandis HOM05D000830 ORTHO05D002187 3.3e-14 82.4 163 38.0
Gohir.A06G160700 Gossypium hirsutum HOM05D000830 ORTHO05D002187 4.3e-14 82.0 179 37.4
CANSAT01G2808 Cannabis sativa HOM05D000830 ORTHO05D002187 9.6e-14 80.9 193 34.7
Psat1g170640 Pisum sativum HOM05D000830 ORTHO05D000104 9.6e-14 80.9 131 38.9
arahy.Tifrunner.gnm1.ann1.8Z0244 Arachis hypogaea HOM05D000830 ORTHO05D002187 2.8e-13 79.3 126 42.9
arahy.Tifrunner.gnm1.ann1.7VK1KP Arachis hypogaea HOM05D000830 ORTHO05D002187 3.6e-13 79.0 130 40.0
Migut.B00698 Erythranthe guttata HOM05D000830 ORTHO05D002187 6.2e-13 78.2 208 32.7
Gohir.D06G166766 Gossypium hirsutum HOM05D000830 ORTHO05D002187 6.2e-13 78.2 142 40.1
COL.COLO4_31128 Corchorus olitorius HOM05D000830 ORTHO05D002187 8.1e-13 77.8 136 38.2
CAN.G1379.18 Capsicum annuum HOM05D000830 ORTHO05D002187 1.8e-12 76.6 129 38.0
ATR1089G050 Amborella trichopoda HOM05D000830 ORTHO05D002187 6.9e-12 74.7 185 32.4
SGA_v2.0_scaffold254G45219 Striga asiatica HOM05D000830 ORTHO05D002187 6.9e-12 74.7 125 38.4
arahy.Tifrunner.gnm1.ann1.DGA0DJ Arachis hypogaea HOM05D000830 ORTHO05D002187 9.0e-12 74.3 130 37.7
unitig_60.g25501 Utricularia gibba HOM05D000830 ORTHO05D002187 2.2e-10 69.7 185 34.6
Zm00001eb260740 Zea mays HOM05D000830 ORTHO05D002187 1.4e-09 67.0 192 30.2
Rhsim11G0115600 Rhododendron simsii HOM05D000830 ORTHO05D002187 7.1e-09 64.7 236 31.4
CDE08G0341 Ceratophyllum demersum HOM05D000830 ORTHO05D002187 2.1e-08 63.2 129 31.8
Rhsim11G0115400 Rhododendron simsii HOM05D000830 ORTHO05D002187 1.3e-07 60.5 236 30.1
unitig_749.g14115 Utricularia gibba HOM05D000830 ORTHO05D002187 1.8e-07 60.1 124 34.7
Atru.chr6.189 Acer truncatum HOM05D000830 ORTHO05D030793 5.6e-06 55.1 85 43.5
unitig_744.g24434 Utricularia gibba HOM05D000830 ORTHO05D002187 9.6e-06 54.3 183 30.6


User provided reference genes

Program Settings