Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 6.4e-241 837.0 432 100.0
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 8.3e-164 580.9 430 74.2
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 7.8e-154 547.7 453 68.7
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 3.0e-153 545.8 455 68.8
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 9.5e-152 540.8 455 68.4
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 1.7e-148 530.0 451 68.5
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 1.6e-146 523.5 404 73.3
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 4.0e-142 508.8 440 65.0
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 2.0e-141 506.5 439 66.1
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 2.0e-141 506.5 441 66.0
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 9.9e-141 504.2 438 67.1
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 9.9e-141 504.2 395 73.2
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 2.2e-140 503.1 436 67.4
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.4e-139 499.6 435 64.6
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 3.2e-139 499.2 446 65.7
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 1.6e-138 496.9 450 64.4
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 7.8e-138 494.6 457 64.1
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 3.0e-137 492.7 389 71.5
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 6.6e-137 491.5 436 65.6
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 1.9e-136 490.0 387 70.5
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 1.9e-136 490.0 459 63.6
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.9e-136 490.0 448 65.0
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 3.3e-136 489.2 461 63.1
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 3.3e-136 489.2 443 65.2
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 7.3e-136 488.0 428 65.0
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 1.2e-135 487.3 441 64.9
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 1.2e-135 487.3 446 62.8
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 8.1e-135 484.6 455 62.2
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 8.9e-134 481.1 428 64.0
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 3.4e-133 479.2 436 64.0
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 3.4e-133 479.2 400 67.2
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 5.8e-133 478.4 508 58.7
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 9.9e-133 477.6 439 64.0
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.8e-132 475.7 380 70.0
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.4e-132 474.9 378 70.9
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 1.1e-131 474.2 435 64.6
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 1.4e-131 473.8 440 64.3
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 1.9e-131 473.4 435 63.7
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 2.4e-131 473.0 457 60.8
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 4.2e-131 472.2 443 62.3
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 1.2e-130 470.7 453 64.7
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.1e-130 469.9 459 62.3
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.7e-130 469.5 469 60.8
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 3.5e-130 469.2 436 63.3
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 4.6e-130 468.8 444 64.2
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 7.8e-130 468.0 449 63.9
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 6.6e-129 464.9 440 60.7
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 1.9e-128 463.4 452 62.2
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 2.5e-128 463.0 428 64.0
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 5.6e-128 461.8 423 64.3
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 9.6e-128 461.1 445 64.0
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 2.4e-126 456.4 463 59.8
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 4.0e-126 455.7 367 71.9
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 6.9e-126 454.9 411 62.5
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 2.2e-124 449.9 441 60.3
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 1.4e-123 447.2 375 68.0
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 1.9e-123 446.8 395 66.1
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 3.2e-123 446.0 379 67.8
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 5.4e-123 445.3 439 60.8
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 7.8e-122 441.4 489 54.8
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 5.6e-120 435.3 424 60.1
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 1.1e-118 431.0 368 64.4
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.8e-118 430.3 438 59.6
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 1.2e-117 427.6 452 55.5
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.5e-117 427.2 448 58.7
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 2.2e-116 423.3 410 60.0
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.4e-115 419.9 308 75.3
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 2.1e-111 406.8 439 56.3
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 5.3e-110 402.1 436 57.8
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.9e-107 393.7 461 55.3
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 9.3e-107 391.3 458 53.1
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 1.0e-105 387.9 310 71.3
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.0e-105 387.9 385 58.7
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 5.1e-105 385.6 456 53.3
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 5.1e-105 385.6 401 59.1
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 8.7e-105 384.8 467 51.2
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 8.7e-105 384.8 467 51.2
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 8.7e-105 384.8 380 61.3
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.3e-103 380.9 369 58.8
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 2.1e-103 380.2 464 50.6
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 6.2e-103 378.6 458 51.3
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 1.1e-102 377.9 617 43.4
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 1.2e-101 374.4 381 58.0
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 4.5e-101 372.5 446 53.1
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.3e-100 370.9 446 52.9
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.9e-99 367.1 461 51.6
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 4.2e-99 365.9 429 51.3
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 4.2e-99 365.9 458 50.4
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 7.9e-98 361.7 308 67.5
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 5.1e-97 359.0 381 54.3
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.1e-96 357.8 463 49.9
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 4.3e-96 355.9 340 62.4
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 4.3e-96 355.9 428 54.7
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 9.7e-96 354.8 431 50.6
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 1.3e-95 354.4 322 63.0
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.5e-93 347.4 596 41.9
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.5e-93 347.4 596 41.9
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 2.6e-93 346.7 439 50.8
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 1.7e-92 344.0 291 68.0
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 2.2e-92 343.6 454 48.2
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 6.5e-92 342.0 454 48.5
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 2.5e-91 340.1 430 50.7
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 7.2e-91 338.6 454 48.5
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 3.6e-90 336.3 464 48.1
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 3.0e-89 333.2 425 49.2
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 1.5e-88 330.9 394 51.8
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 2.8e-87 326.6 464 48.3
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 2.4e-86 323.6 299 63.5
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 1.0e-84 318.2 483 45.1
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 9.4e-83 311.6 360 53.1
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 4.4e-80 302.8 320 54.7
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 5.7e-80 302.4 395 49.9
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.7e-79 299.7 304 61.5
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.8e-78 297.4 464 44.6
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 6.5e-76 288.9 414 45.4
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 2.1e-74 283.9 321 56.7
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 1.5e-72 277.7 216 69.4
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 7.4e-72 275.4 400 47.0
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 5.7e-64 249.2 398 43.0
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.3e-63 248.1 209 63.2
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 3.0e-57 226.9 330 49.1
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 6.3e-55 219.2 283 48.1
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 9.1e-54 215.3 320 43.8
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.7e-53 213.8 119 89.9
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 9.5e-51 205.3 358 42.5
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.3e-47 194.9 307 45.3
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 1.4e-46 191.4 396 39.4
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 3.2e-46 190.3 231 53.7
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 5.4e-46 189.5 102 88.2
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 4.3e-35 153.3 141 49.6
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 5.8e-32 142.9 274 40.5
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.4e-30 137.5 274 39.1
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 7.1e-30 136.0 330 37.0
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 7.8e-29 132.5 67 97.0
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 2.3e-28 131.0 140 54.3
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 1.9e-27 127.9 149 40.9
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 5.2e-25 119.8 74 83.8
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 4.9e-23 113.2 191 44.5
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.9e-22 111.3 64 84.4
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 7.1e-22 109.4 69 82.6
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 2.4e-17 94.4 88 62.5
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 4.0e-17 93.6 126 51.6
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 5.8e-16 89.7 47 89.4
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 2.9e-15 87.4 87 52.9
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.3e-14 82.4 51 72.5
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 3.3e-11 73.9 65 52.3
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 3.3e-11 73.9 99 43.4
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.8e-09 68.2 137 40.1
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.5e-08 65.1 157 24.8
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 2.6e-08 64.3 52 65.4


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