Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0814 Trochodendron aralioides HOM05D000172 ORTHO05D000781 1.4e-66 256.1 129 100.0
TAR376G1010 Trochodendron aralioides HOM05D000172 ORTHO05D000781 3.8e-24 115.2 177 41.8
Aqoxy6G02848 Aquilegia oxysepala HOM05D000172 ORTHO05D000781 2.1e-22 109.4 178 41.0
Nn5g30430 Nelumbo nucifera HOM05D000172 ORTHO05D000781 4.7e-22 108.2 177 39.5
PSO210G7133 Papaver somniferum HOM05D000172 ORTHO05D000781 1.5e-20 103.2 184 38.6
PSO170G6860 Papaver somniferum HOM05D000172 ORTHO05D000781 2.6e-20 102.4 184 38.0
Dinv15768 Davidia involucrata HOM05D000172 ORTHO05D000781 3.4e-20 102.1 185 35.1
QL11p033375 Quercus lobata HOM05D000172 ORTHO05D000781 3.4e-20 102.1 177 40.1
GSVIVG01037920001 Vitis vinifera HOM05D000172 ORTHO05D000781 3.4e-20 102.1 176 37.5
Actinidia00407 Actinidia chinensis HOM05D000172 ORTHO05D000781 2.9e-19 99.0 189 35.4
AUR62039069 Chenopodium quinoa HOM05D000172 ORTHO05D000781 3.7e-19 98.6 145 41.4
MSTRG.16710 Avicennia marina HOM05D000172 ORTHO05D000781 4.9e-19 98.2 177 37.3
AUR62010317 Chenopodium quinoa HOM05D000172 ORTHO05D000781 1.4e-18 96.7 145 41.4
Hma1.2p1_0796F.1_g219270 Hydrangea macrophylla HOM05D000172 ORTHO05D000781 1.8e-18 96.3 177 35.6
Cc02_g19300 Coffea canephora HOM05D000172 ORTHO05D000781 2.4e-18 95.9 185 36.2
Peaxi162Scf00152g00236 Petunia axillaris HOM05D000172 ORTHO05D000781 2.4e-18 95.9 177 36.2
Cc02_g19310 Coffea canephora HOM05D000172 ORTHO05D000781 5.4e-18 94.7 185 36.2
Zm00001eb307440 Zea mays HOM05D000172 ORTHO05D000781 7.0e-18 94.4 178 35.4
CAN.G13.8 Capsicum annuum HOM05D000172 ORTHO05D000781 9.2e-18 94.0 177 34.5
Sabra09G0073200 Salix brachista HOM05D000172 ORTHO05D000781 9.2e-18 94.0 180 34.4
COL.COLO4_32584 Corchorus olitorius HOM05D000172 ORTHO05D000781 1.2e-17 93.6 176 36.4
CiPaw.05G012100 Carya illinoinensis HOM05D000172 ORTHO05D000781 1.6e-17 93.2 177 36.2
ATR0205G013 Amborella trichopoda HOM05D000172 ORTHO05D000781 2.0e-17 92.8 182 35.7
Duzib132G0167 Durio zibethinus HOM05D000172 ORTHO05D000781 2.0e-17 92.8 177 35.6
RcHm_v2.0_Chr6g0254931 Rosa chinensis HOM05D000172 ORTHO05D000781 2.0e-17 92.8 177 37.9
CSS0020672 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.7e-17 92.4 178 36.0
CSS0028991 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.7e-17 92.4 178 36.0
FAN20G3184 Fragaria x ananassa HOM05D000172 ORTHO05D000781 2.7e-17 92.4 177 38.4
Solyc11g032200.2 Solanum lycopersicum HOM05D000172 ORTHO05D000781 2.7e-17 92.4 180 33.9
Sopen11g015400 Solanum pennellii HOM05D000172 ORTHO05D000781 2.7e-17 92.4 180 33.9
Eucgr.I01102 Eucalyptus grandis HOM05D000172 ORTHO05D000781 3.5e-17 92.0 177 37.3
FAN24G2782 Fragaria x ananassa HOM05D000172 ORTHO05D000781 3.5e-17 92.0 177 37.9
FAN15G3207 Fragaria x ananassa HOM05D000172 ORTHO05D000781 4.6e-17 91.7 177 38.4
Nitab4.5_0000292g0050 Nicotiana tabacum HOM05D000172 ORTHO05D000781 5.9e-17 91.3 177 34.5
Nitab4.5_0002894g0010 Nicotiana tabacum HOM05D000172 ORTHO05D000781 5.9e-17 91.3 177 35.0
Os09g0103100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D000781 7.8e-17 90.9 178 34.3
Prupe.8G135900 Prunus persica HOM05D000172 ORTHO05D000781 7.8e-17 90.9 177 35.6
Manes.07G070900 Manihot esculenta HOM05D000172 ORTHO05D000781 1.0e-16 90.5 177 35.0
Potri.009G094900 Populus trichocarpa HOM05D000172 ORTHO05D000781 1.0e-16 90.5 184 34.8
Thecc.02G109100 Theobroma cacao HOM05D000172 ORTHO05D000781 1.0e-16 90.5 177 35.0
Oeu010407.1 Olea europaea HOM05D000172 ORTHO05D000781 1.3e-16 90.1 177 33.3
Oeu045543.1 Olea europaea HOM05D000172 ORTHO05D000781 1.3e-16 90.1 171 35.7
Cfa004588 Carpinus fangiana HOM05D000172 ORTHO05D000781 1.7e-16 89.7 177 35.6
MD10G1098600 Malus domestica HOM05D000172 ORTHO05D000781 1.7e-16 89.7 177 35.0
Hund06313 Selenicereus undatus HOM05D000172 ORTHO05D000781 1.7e-16 89.7 177 37.3
Cpa.g.sc106.100 Carica papaya HOM05D000172 ORTHO05D000781 2.3e-16 89.4 185 34.6
Lalb_Chr06g0165421 Lupinus albus HOM05D000172 ORTHO05D000781 2.3e-16 89.4 177 38.4
Gorai.008G022600 Gossypium raimondii HOM05D000172 ORTHO05D000781 5.0e-16 88.2 177 35.0
Lsat_1_v5_gn_5_116180 Lactuca sativa HOM05D000172 ORTHO05D000781 6.6e-16 87.8 167 35.9
CANSAT25G0132 Cannabis sativa HOM05D000172 ORTHO05D000781 1.1e-15 87.0 177 35.0
CANSAT25G3736 Cannabis sativa HOM05D000172 ORTHO05D000781 1.1e-15 87.0 177 35.0
Gohir.D12G022200 Gossypium hirsutum HOM05D000172 ORTHO05D000781 1.1e-15 87.0 177 35.0
HanXRQChr10g0296971 Helianthus annuus HOM05D000172 ORTHO05D000781 1.1e-15 87.0 186 33.9
Rhsim11G0159500 Rhododendron simsii HOM05D000172 ORTHO05D000781 1.1e-15 87.0 180 31.7
Medtr1g107330 Medicago truncatula HOM05D000172 ORTHO05D000781 1.5e-15 86.7 177 35.0
Migut.B00393 Erythranthe guttata HOM05D000172 ORTHO05D000781 2.5e-15 85.9 177 34.5
SGA_v2.0_scaffold225G43067 Striga asiatica HOM05D000172 ORTHO05D000781 2.5e-15 85.9 177 33.3
PSO541G5053 Papaver somniferum HOM05D000172 ORTHO05D000781 3.3e-15 85.5 177 37.3
Gohir.A12G021700 Gossypium hirsutum HOM05D000172 ORTHO05D000781 4.3e-15 85.1 177 34.5
Phvul.007G039100 Phaseolus vulgaris HOM05D000172 ORTHO05D000781 4.3e-15 85.1 177 33.3
Sc14g0001870 Simmondsia chinensis HOM05D000172 ORTHO05D000781 9.5e-15 84.0 177 34.5
EL10Ac9g22267 Beta vulgaris HOM05D000172 ORTHO05D000781 1.2e-14 83.6 176 31.8
Glyma.10G262850 Glycine max HOM05D000172 ORTHO05D000781 1.2e-14 83.6 177 33.9
Glyma.20G127800 Glycine max HOM05D000172 ORTHO05D000781 1.2e-14 83.6 177 34.5
arahy.Tifrunner.gnm1.ann1.5497SD Arachis hypogaea HOM05D000172 ORTHO05D000781 1.6e-14 83.2 177 34.5
arahy.Tifrunner.gnm1.ann1.H077MW Arachis hypogaea HOM05D000172 ORTHO05D000781 1.6e-14 83.2 177 34.5
Haze_10181 Corylus avellana HOM05D000172 ORTHO05D000781 1.6e-14 83.2 210 33.8
Psat6g217800 Pisum sativum HOM05D000172 ORTHO05D000781 1.6e-14 83.2 177 33.9
Ciclev10028553m.g Citrus clementina HOM05D000172 ORTHO05D000781 2.1e-14 82.8 176 33.5
Oeu018583.1 Olea europaea HOM05D000172 ORTHO05D000781 2.1e-14 82.8 177 31.1
PSO675G8798 Papaver somniferum HOM05D000172 ORTHO05D000781 3.6e-14 82.0 177 37.3
TWI79G1031 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 3.6e-14 82.0 180 32.2
CDE02G2713 Ceratophyllum demersum HOM05D000172 ORTHO05D000781 4.7e-14 81.6 176 30.7
MELO3C018487.2 Cucumis melo HOM05D000172 ORTHO05D000781 4.7e-14 81.6 147 37.4
Atru.chr5.2514 Acer truncatum HOM05D000172 ORTHO05D000781 8.0e-14 80.9 177 34.5
Ca_11069_v3 Cicer arietinum L. HOM05D000172 ORTHO05D000781 1.1e-13 80.5 177 32.8
VMungo0720G2067 Vigna mungo HOM05D004179 ORTHO05D005248 1.4e-13 80.1 177 31.6
HPP92_008256 Vanilla planifolia HOM05D000172 ORTHO05D000781 1.8e-13 79.7 197 31.5
DCAR_001651 Daucus carota HOM05D000172 ORTHO05D000781 3.1e-13 79.0 177 33.9
Lj5g0008199 Lotus japonicus HOM05D000172 ORTHO05D000781 4.0e-13 78.6 180 33.3
Aa31LG8G13080 Aethionema arabicum HOM05D000172 ORTHO05D000781 5.2e-13 78.2 177 32.2
THA.LOC104807237 Tarenaya hassleriana HOM05D000172 ORTHO05D000781 6.8e-13 77.8 177 33.3
PGR142G0361 Punica granatum HOM05D000172 ORTHO05D000781 1.2e-12 77.0 193 32.6
Lsat_1_v5_gn_5_116261 Lactuca sativa HOM05D000172 ORTHO05D000781 1.5e-12 76.6 185 30.8
Lj5C214T14 Lonicera japonica HOM05D000172 ORTHO05D000781 5.8e-12 74.7 177 33.9
unitig_0.g101 Utricularia gibba HOM05D000172 ORTHO05D000781 5.8e-12 74.7 205 29.3
ECA234G4284 Erigeron canadensis HOM05D000172 ORTHO05D000781 7.5e-12 74.3 177 31.1
Sp3g28470 Schrenkiella parvula HOM05D000172 ORTHO05D000781 7.5e-12 74.3 176 34.7
TPR.G3257 Trifolium pratense HOM05D000172 ORTHO05D000781 9.8e-12 73.9 203 30.0
AT2G15230 Arabidopsis thaliana HOM05D000172 ORTHO05D000781 1.3e-11 73.6 176 33.0
FvH4_2g05050 Fragaria vesca HOM05D000172 ORTHO05D000781 1.7e-11 73.2 45 80.0
HPP92_008253 Vanilla planifolia HOM05D000172 ORTHO05D000781 1.7e-11 73.2 50 74.0
AL3G46940 Arabidopsis lyrata HOM05D000172 ORTHO05D000781 2.9e-11 72.4 176 33.0
BcaC06g36039 Brassica carinata HOM05D000172 ORTHO05D000781 4.9e-11 71.6 176 33.5
C07p08650 Brassica napus HOM05D000172 ORTHO05D000781 4.9e-11 71.6 176 33.5
BolC7t41277H Brassica oleracea HOM05D000172 ORTHO05D000781 4.9e-11 71.6 176 33.5
Thhalv10022719m.g Eutrema salsugineum HOM05D000172 ORTHO05D000781 4.9e-11 71.6 176 33.5
SEGI_32303 Sequoiadendron giganteum HOM05D000172 ORTHO05D000781 4.9e-11 71.6 177 31.6
SEGI_36667 Sequoiadendron giganteum HOM05D000172 ORTHO05D000781 4.9e-11 71.6 177 31.6
Carub.0003s2907 Capsella rubella HOM05D000172 ORTHO05D000781 8.3e-11 70.9 176 31.2
FAN27G2874 Fragaria x ananassa HOM05D000172 ORTHO05D000781 8.3e-11 70.9 45 77.8
CARHR105620 Cardamine hirsuta HOM05D000172 ORTHO05D000781 1.1e-10 70.5 176 33.0
ClCG02G006410 Citrullus lanatus HOM05D000172 ORTHO05D000781 1.9e-10 69.7 177 30.5
BcaB03g16245 Brassica carinata HOM05D000172 ORTHO05D000781 3.2e-10 68.9 176 32.4
A07p05390 Brassica napus HOM05D000172 ORTHO05D000781 4.1e-10 68.6 176 33.0
Sed0009779 Sechium edule HOM05D000172 ORTHO05D000781 1.6e-09 66.6 182 27.5
vmacro02000 Vaccinium macrocarpon HOM05D000172 ORTHO05D000781 7.8e-09 64.3 45 68.9
AagrBONN_evm.TU.Sc2ySwM_228.409 Anthoceros agrestis HOM05D000172 ORTHO05D000781 3.9e-08 62.0 186 26.3
BraA07t28333Z Brassica rapa HOM05D000172 ORTHO05D000781 1.1e-07 60.5 45 64.4
Mapoly0134s0021 Marchantia polymorpha HOM05D000172 ORTHO05D000781 4.3e-07 58.5 177 29.4
Pp3c8_1920 Physcomitrium patens HOM05D000172 ORTHO05D000781 4.3e-07 58.5 188 28.2
Pp3c3_34940 Physcomitrium patens HOM05D000172 ORTHO05D000781 5.6e-07 58.2 184 28.3
PGSC0003DMG402018785 Solanum tuberosum HOM05D000172 ORTHO05D000781 7.3e-07 57.8 55 45.5
HPP92_008255 Vanilla planifolia HOM05D000172 ORTHO05D000781 1.2e-06 57.0 53 52.8
CsaV3_7G008200 Cucumis sativus L. HOM05D000172 ORTHO05D000781 2.8e-06 55.8 212 26.9
Nitab4.5_0007150g0040 Nicotiana tabacum HOM05D000172 ORTHO05D000781 3.6e-06 55.5 124 31.5
Oeu010405.1 Olea europaea HOM05D000172 ORTHO05D000781 4.7e-06 55.1 48 60.4
SMO202G0072 Selaginella moellendorffii HOM05D000172 ORTHO05D000781 6.2e-06 54.7 126 30.2


User provided reference genes

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