Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 4.9e-115 417.9 230 100.0
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 7.7e-100 367.5 230 88.7
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 3.7e-94 348.6 230 84.3
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 2.5e-90 335.9 225 83.6
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 4.2e-90 335.1 227 81.1
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.7e-89 332.4 225 75.1
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 2.7e-89 332.4 226 80.1
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 8.8e-88 327.4 230 79.6
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 1.1e-87 327.0 228 71.1
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 3.7e-86 322.0 216 82.4
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 8.2e-86 320.9 235 70.2
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 8.2e-86 320.9 225 80.0
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 1.1e-85 320.5 220 80.9
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.4e-85 320.1 230 70.9
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.4e-85 320.1 235 69.8
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 3.1e-85 318.9 225 79.6
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 4.1e-85 318.5 226 78.3
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 4.1e-85 318.5 225 80.0
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 9.1e-85 317.4 225 79.1
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.2e-84 317.0 226 74.8
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.2e-84 317.0 225 78.7
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 2.6e-84 315.8 220 80.0
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.5e-84 315.5 225 78.2
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.5e-84 315.5 216 75.9
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 3.5e-84 315.5 216 75.9
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 5.9e-84 314.7 222 79.3
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 7.7e-84 314.3 224 77.7
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.3e-83 313.5 216 80.1
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.7e-83 313.2 226 77.4
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.7e-83 313.2 226 77.4
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 5.0e-83 311.6 224 76.3
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 6.5e-83 311.2 223 76.7
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 1.1e-82 310.5 224 77.7
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.5e-82 310.1 216 80.1
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.5e-82 309.3 226 77.4
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 4.2e-82 308.5 209 83.3
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 1.6e-81 306.6 227 69.6
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.6e-81 306.6 207 83.1
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.6e-81 306.6 216 79.2
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 2.1e-81 306.2 219 71.2
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 4.7e-81 305.1 219 68.9
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.4e-80 303.5 216 78.7
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.8e-80 303.1 226 74.8
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 3.0e-80 302.4 230 73.0
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 3.0e-80 302.4 218 76.6
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 4.0e-80 302.0 225 76.9
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 4.0e-80 302.0 230 73.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 4.0e-80 302.0 227 72.2
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 5.2e-80 301.6 226 65.5
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 5.2e-80 301.6 226 67.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 4.4e-79 298.5 217 68.7
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 4.4e-79 298.5 211 78.2
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 1.3e-78 297.0 208 70.7
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.7e-78 295.4 217 67.7
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 3.7e-78 295.4 208 78.8
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 4.8e-78 295.0 234 73.1
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 4.8e-78 295.0 218 74.8
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 8.2e-78 294.3 218 74.3
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 8.2e-78 294.3 218 74.3
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 1.8e-77 293.1 218 74.3
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 2.4e-77 292.7 211 75.4
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 3.1e-77 292.4 227 63.9
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 7.0e-77 291.2 217 77.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 9.1e-77 290.8 218 76.1
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 9.1e-77 290.8 217 73.7
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 9.1e-77 290.8 268 57.8
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 1.6e-76 290.0 217 76.5
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 1.6e-76 290.0 217 76.5
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.0e-76 289.7 228 70.6
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 2.0e-76 289.7 218 73.9
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 3.5e-76 288.9 218 75.7
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 4.5e-76 288.5 225 71.1
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 5.9e-76 288.1 225 72.4
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 7.7e-76 287.7 211 67.3
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.0e-75 287.3 218 74.8
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.3e-75 287.0 218 75.2
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 1.3e-75 287.0 214 75.7
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 2.2e-75 286.2 218 74.3
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 5.0e-75 285.0 209 73.2
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 1.1e-74 283.9 218 73.9
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.9e-74 283.1 218 72.9
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 2.5e-74 282.7 218 74.3
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 3.2e-74 282.3 171 79.5
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 5.5e-74 281.6 207 76.3
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 5.5e-74 281.6 207 69.1
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 9.4e-74 280.8 207 75.4
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.2e-73 280.4 202 78.7
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 1.6e-73 280.0 216 73.1
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 2.7e-73 279.3 207 76.3
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.6e-73 278.9 171 76.6
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 2.3e-72 276.2 207 67.6
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 6.8e-72 274.6 217 71.4
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 6.8e-72 274.6 210 63.3
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 6.8e-72 274.6 205 77.1
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.2e-71 273.9 207 75.8
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 3.4e-71 272.3 207 75.4
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 9.8e-71 270.8 207 75.4
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.3e-70 270.4 218 64.2
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 2.8e-70 269.2 215 68.8
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 8.3e-70 267.7 227 66.1
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.1e-69 267.3 193 77.7
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.4e-69 266.2 209 72.7
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 2.0e-68 263.1 207 74.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.7e-67 260.0 209 70.8
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 2.3e-67 259.6 207 62.8
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 1.5e-63 246.9 222 56.8
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 6.3e-62 241.5 216 60.6
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 6.3e-62 241.5 215 58.6
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 8.3e-62 241.1 215 60.9
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 3.9e-59 232.3 225 63.6
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.2e-52 210.7 230 58.3
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 3.0e-51 206.1 211 58.3
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 6.2e-49 198.4 169 59.2
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 6.4e-46 188.3 218 45.0
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 7.3e-42 174.9 202 53.5
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.7e-38 162.5 138 60.9
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 3.0e-35 152.9 202 51.5
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.5e-34 150.6 99 74.7
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 1.7e-22 110.5 102 71.6
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.3e-17 94.4 78 59.0
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 3.5e-12 76.3 47 72.3
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 3.7e-09 66.2 96 42.7
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 2.9e-06 56.6 80 35.0
BcaC07g42481 Brassica carinata HOM05D000710 ORTHO05D000336 6.4e-06 55.5 162 29.6
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 6.4e-06 55.5 102 37.3
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.4e-06 55.5 83 39.8
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.4e-06 55.5 102 37.3
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 6.4e-06 55.5 52 53.8
FAN23G0561 Fragaria x ananassa HOM05D000710 ORTHO05D000336 8.4e-06 55.1 157 30.6


User provided reference genes

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