Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0777 Trochodendron aralioides HOM05D009414 ORTHO05D010503 2.2e-40 168.7 96 100.0
TAR381G0868 Trochodendron aralioides HOM05D009414 ORTHO05D010503 2.2e-40 168.7 96 100.0
TAR628G0878 Trochodendron aralioides HOM05D009414 ORTHO05D010503 3.0e-21 105.1 87 66.7
Nn5g28783 Nelumbo nucifera HOM05D009414 ORTHO05D010503 3.4e-17 91.7 96 58.3
QL06p036391 Quercus lobata HOM05D009414 ORTHO05D010503 2.2e-16 89.0 90 54.4
Nn1g06054 Nelumbo nucifera HOM05D009414 ORTHO05D010503 1.2e-14 83.2 97 51.5
QL06p031201 Quercus lobata HOM05D009414 ORTHO05D010503 6.0e-14 80.9 103 52.4
Nn5g28786 Nelumbo nucifera HOM05D009414 ORTHO05D010503 1.7e-13 79.3 99 46.5
Nn1g06058 Nelumbo nucifera HOM05D009414 ORTHO05D010503 5.6e-12 74.3 87 54.0
Cfa002797 Carpinus fangiana HOM05D009414 ORTHO05D010503 7.3e-12 73.9 97 56.7
Cfa002796 Carpinus fangiana HOM05D009414 ORTHO05D010503 6.2e-11 70.9 105 49.5
Haze_25094 Corylus avellana HOM05D009414 ORTHO05D010503 1.8e-10 69.3 107 46.7
Manes.12G146500 Manihot esculenta HOM05D009414 ORTHO05D010503 3.1e-10 68.6 109 44.0
Nn5g28782 Nelumbo nucifera HOM05D009414 ORTHO05D010503 3.1e-10 68.6 97 46.4
Haze_25097 Corylus avellana HOM05D009414 ORTHO05D010503 5.2e-10 67.8 85 47.1
Haze_25098 Corylus avellana HOM05D009414 ORTHO05D010503 5.2e-10 67.8 85 47.1
Haze_25096 Corylus avellana HOM05D009414 ORTHO05D010503 2.6e-09 65.5 106 46.2
Manes.13G081600 Manihot esculenta HOM05D009414 ORTHO05D010503 9.9e-09 63.5 108 44.4
Atru.chr4.624 Acer truncatum HOM05D009414 ORTHO05D010503 1.3e-08 63.2 101 47.5
Potri.007G076600 Populus trichocarpa HOM05D009414 ORTHO05D010503 3.8e-08 61.6 101 44.6
Nn1g06059 Nelumbo nucifera HOM05D009414 ORTHO05D010503 4.9e-08 61.2 66 53.0
Prupe.6G161200 Prunus persica HOM05D009414 ORTHO05D010503 6.4e-08 60.8 96 52.1
Sabra07G0064500 Salix brachista HOM05D009414 ORTHO05D010503 1.4e-07 59.7 85 45.9
SGA_v2.0_scaffold1G00340 Striga asiatica HOM05D016242 ORTHO05D019113 1.4e-07 59.7 99 43.4
Haze_01982 Corylus avellana HOM05D016033 ORTHO05D017790 1.9e-07 59.3 113 38.1
CiPaw.03G130700 Carya illinoinensis HOM05D009414 ORTHO05D010503 7.1e-07 57.4 54 55.6
Cfa020111 Carpinus fangiana HOM05D016033 ORTHO05D017790 1.2e-06 56.6 114 43.0
Thecc.04G192300 Theobroma cacao HOM05D015425 ORTHO05D017884 1.6e-06 56.2 90 36.7
Ciclev10027329m.g Citrus clementina HOM05D009414 ORTHO05D010503 2.1e-06 55.8 83 51.8
QL06p031208 Quercus lobata HOM05D009414 ORTHO05D010503 2.1e-06 55.8 105 49.5
Cfa005378 Carpinus fangiana HOM05D016033 ORTHO05D017790 3.5e-06 55.1 104 35.6
Gohir.D03G048000 Gossypium hirsutum HOM05D018858 ORTHO05D010503 7.8e-06 53.9 51 56.9


User provided reference genes

Program Settings