Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 6.5e-263 910.2 474 100.0
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 4.3e-206 721.5 472 79.0
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 4.6e-192 674.9 474 75.3
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.0e-191 673.7 485 74.0
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.1e-190 670.2 476 72.3
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.3e-186 656.8 481 71.9
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.4e-185 653.3 470 71.1
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 7.9e-184 647.5 479 72.2
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 7.9e-184 647.5 504 69.4
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 7.9e-184 647.5 505 69.3
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 2.5e-182 642.5 482 72.0
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 3.3e-182 642.1 473 70.4
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 1.3e-181 640.2 475 70.1
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 4.8e-181 638.3 481 70.5
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 6.3e-181 637.9 475 70.1
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 4.1e-180 635.2 514 66.3
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 4.1e-180 635.2 474 69.4
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 9.1e-180 634.0 474 70.3
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.2e-179 633.6 479 70.8
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.2e-178 629.4 471 69.0
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 3.8e-178 628.6 476 68.5
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 3.2e-177 625.5 470 68.5
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 9.4e-177 624.0 474 70.0
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.2e-176 623.6 472 67.6
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 1.6e-176 623.2 474 69.0
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 2.1e-176 622.9 473 68.9
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 2.1e-176 622.9 472 69.3
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 3.6e-176 622.1 474 68.8
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 3.6e-176 622.1 474 68.8
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.6e-176 621.7 474 68.1
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 2.8e-173 612.5 496 66.7
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 3.7e-173 612.1 469 67.8
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 4.8e-173 611.7 471 67.1
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.4e-172 610.1 491 66.6
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 9.1e-172 607.4 491 68.0
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.5e-171 606.7 476 66.4
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 5.9e-171 604.7 472 66.7
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.0e-170 604.0 472 66.7
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.9e-170 602.4 472 66.7
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.9e-170 602.4 472 66.7
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 8.5e-170 600.9 480 66.0
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 7.2e-169 597.8 474 66.0
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.6e-168 596.7 473 66.2
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 2.7e-168 595.9 477 65.8
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 3.6e-168 595.5 469 65.5
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 3.0e-167 592.4 468 66.9
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 3.9e-167 592.0 467 66.2
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.1e-166 590.5 475 65.5
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 5.7e-166 588.2 487 64.7
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.7e-165 586.6 474 65.2
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.1e-164 583.9 476 64.3
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 3.1e-164 582.4 470 64.5
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 4.1e-164 582.0 473 64.9
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 5.3e-164 581.6 474 64.3
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 4.5e-163 578.6 475 65.1
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 3.8e-162 575.5 483 63.8
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 8.5e-162 574.3 472 64.0
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.9e-161 573.2 468 63.0
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 3.2e-161 572.4 475 64.6
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 1.2e-160 570.5 475 64.6
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 4.7e-160 568.5 451 68.5
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 2.3e-159 566.2 473 63.2
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 4.0e-159 565.5 467 61.7
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 4.0e-159 565.5 481 62.6
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 6.7e-159 564.7 467 61.2
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 8.8e-159 564.3 468 62.0
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.2e-158 563.9 468 61.5
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 2.0e-158 563.1 489 61.1
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.0e-158 563.1 467 61.2
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 3.3e-158 562.4 474 63.9
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 7.5e-158 561.2 467 61.0
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.3e-157 560.5 468 64.3
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 8.2e-157 557.8 472 63.8
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 3.1e-156 555.8 469 61.0
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 3.1e-156 555.8 473 63.2
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 1.6e-155 553.5 469 61.0
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 1.0e-154 550.8 434 66.4
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 5.0e-154 548.5 494 59.9
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.1e-153 547.4 474 61.4
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.5e-153 547.0 423 67.8
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.9e-153 546.6 473 59.4
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.5e-150 537.0 426 66.7
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 2.2e-149 533.1 475 57.9
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 2.4e-148 529.6 473 59.6
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 5.0e-146 521.9 492 56.3
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.6e-144 516.9 465 59.1
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 2.1e-144 516.5 373 70.8
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.6e-144 515.8 438 63.7
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.0e-143 514.2 465 59.4
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 1.2e-142 510.8 381 69.6
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.8e-141 506.1 483 56.7
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 6.4e-133 478.4 316 77.2
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 3.2e-132 476.1 338 73.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.7e-130 470.3 464 53.2
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 4.3e-129 465.7 470 55.1
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 3.1e-127 459.5 371 64.7
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 4.0e-127 459.1 489 51.3
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 3.2e-124 449.5 319 72.7
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 3.5e-123 446.0 515 50.7
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 8.1e-112 408.3 350 62.9
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 5.4e-108 395.6 337 61.7
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.6e-107 394.0 331 64.4
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 9.9e-102 374.8 372 55.1
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.2e-101 373.6 348 56.9
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 3.6e-96 356.3 312 62.8
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 1.9e-92 344.0 490 40.6
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 2.2e-85 320.5 265 64.2
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 2.6e-78 297.0 219 68.9
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 4.2e-76 289.7 440 40.9
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 3.2e-68 263.5 388 44.1
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.2e-64 250.8 494 34.8
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.6e-51 208.0 154 73.4
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 3.1e-47 193.7 499 32.3
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 5.9e-46 189.5 197 56.3
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.5e-33 148.3 387 34.9
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 4.4e-33 146.7 126 67.5
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 4.8e-32 143.3 496 26.4
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 7.2e-28 129.4 429 27.7
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.8e-26 124.8 411 26.5
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 3.4e-25 120.6 84 71.4
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 9.8e-25 119.0 135 51.9
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 2.5e-20 104.4 81 63.0
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 4.3e-20 103.6 81 64.2
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 9.5e-20 102.4 82 64.6
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 1.5e-17 95.1 100 50.0
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 3.2e-15 87.4 102 50.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 5.2e-10 70.1 72 50.0
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 1.5e-09 68.6 72 50.0
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 6.0e-06 56.6 100 43.0


User provided reference genes

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