Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0654 Trochodendron aralioides HOM05D000439 ORTHO05D415726 2.3e-105 385.6 191 100.0
Nn5g30474 Nelumbo nucifera HOM05D000439 ORTHO05D001363 3.8e-28 129.0 127 54.3
TAR625G0925 Trochodendron aralioides HOM05D000439 ORTHO05D001363 6.1e-26 121.7 133 51.1
Aqoxy6G02803 Aquilegia oxysepala HOM05D000439 ORTHO05D001363 1.7e-23 113.6 133 48.9
MBI16_g15950_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 5.9e-21 105.1 134 49.3
Cfa004083 Carpinus fangiana HOM05D000439 ORTHO05D001363 1.9e-19 100.1 133 48.1
CSS0028492 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.5e-19 99.8 133 46.6
Prupe.6G225800 Prunus persica HOM05D000439 ORTHO05D001363 3.6e-18 95.9 133 45.1
MD02G1180500 Malus domestica HOM05D000439 ORTHO05D001363 1.0e-17 94.4 133 45.1
Manes.13G115800 Manihot esculenta HOM05D000439 ORTHO05D001363 1.0e-17 94.4 130 41.5
Dinv26887 Davidia involucrata HOM05D000439 ORTHO05D001363 5.2e-17 92.0 134 44.0
CSS0022440 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 1.2e-16 90.9 133 42.9
FvH4_1g17030 Fragaria vesca HOM05D000439 ORTHO05D001363 3.3e-16 89.4 133 42.1
Ciclev10025275m.g Citrus clementina HOM05D000439 ORTHO05D001363 4.4e-16 89.0 114 44.7
FAN19G0252 Fragaria x ananassa HOM05D000439 ORTHO05D001363 5.7e-16 88.6 133 42.1
PSO541G6537 Papaver somniferum HOM05D000439 ORTHO05D001363 5.7e-16 88.6 133 42.9
Actinidia04648 Actinidia chinensis HOM05D000439 ORTHO05D001363 7.5e-16 88.2 130 43.1
RcHm_v2.0_Chr2g0107191 Rosa chinensis HOM05D000439 ORTHO05D001363 7.5e-16 88.2 133 42.9
Hund16373 Selenicereus undatus HOM05D000439 ORTHO05D001363 9.7e-16 87.8 134 41.8
FAN28G0097 Fragaria x ananassa HOM05D000439 ORTHO05D001363 1.1e-14 84.3 133 39.8
Cpa.g.sc6.69 Carica papaya HOM05D000439 ORTHO05D001363 1.4e-14 84.0 134 40.3
FAN23G2520 Fragaria x ananassa HOM05D000439 ORTHO05D001363 1.8e-14 83.6 133 40.6
Gorai.011G107000 Gossypium raimondii HOM05D000439 ORTHO05D001363 1.8e-14 83.6 133 42.1
Hma1.2p1_1039F.1_g250775 Hydrangea macrophylla HOM05D000439 ORTHO05D001363 3.1e-14 82.8 133 42.1
Actinidia36450 Actinidia chinensis HOM05D000702 ORTHO05D001796 4.1e-14 82.4 130 43.8
EL10Ac6g15673 Beta vulgaris HOM05D000439 ORTHO05D001363 5.9e-13 78.6 139 38.1
Lj7C85T4 Lonicera japonica HOM05D000439 ORTHO05D001363 7.7e-13 78.2 128 39.8
Gohir.A10G090400 Gossypium hirsutum HOM05D000439 ORTHO05D001363 1.0e-12 77.8 100 43.0
Zm00001eb326410 Zea mays HOM05D000439 ORTHO05D001363 1.0e-12 77.8 133 38.3
Lalb_Chr16g0378741 Lupinus albus HOM05D000439 ORTHO05D001363 1.3e-12 77.4 135 39.3
ATR0661G202 Amborella trichopoda HOM05D000439 ORTHO05D001363 1.7e-12 77.0 132 32.6
Lj4g0012966 Lotus japonicus HOM05D000439 ORTHO05D001363 1.7e-12 77.0 131 38.2
TPR.G23856 Trifolium pratense HOM05D000439 ORTHO05D001363 2.2e-12 76.6 134 39.6
VMungo0251G0144 Vigna mungo HOM05D000439 ORTHO05D001363 5.0e-12 75.5 130 40.0
CANSAT01G0256 Cannabis sativa HOM05D000439 ORTHO05D001363 8.5e-12 74.7 129 36.4
Haze_15331 Corylus avellana HOM05D000439 ORTHO05D001363 8.5e-12 74.7 133 38.3
Lalb_Chr05g0226081 Lupinus albus HOM05D000439 ORTHO05D001363 1.1e-11 74.3 129 39.5
Os07g0592300 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D001363 1.1e-11 74.3 133 38.3
Rhsim10G0105200 Rhododendron simsii HOM05D000439 ORTHO05D001363 1.5e-11 73.9 130 40.0
vmacro05235 Vaccinium macrocarpon HOM05D000439 ORTHO05D001363 1.5e-11 73.9 130 39.2
Psat4g082880 Pisum sativum HOM05D000439 ORTHO05D001363 2.5e-11 73.2 130 36.9
DCAR_010843 Daucus carota HOM05D000439 ORTHO05D001363 4.2e-11 72.4 121 38.0
Gohir.D10G097500 Gossypium hirsutum HOM05D000439 ORTHO05D001363 1.2e-10 70.9 133 37.6
Ah.02g125680 Amaranthus hybridus HOM05D000439 ORTHO05D001363 2.7e-10 69.7 130 39.2
MBI10_g23580_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 2.7e-10 69.7 120 41.7
Medtr4g095080 Medicago truncatula HOM05D000439 ORTHO05D001363 3.6e-10 69.3 130 36.9
AUR62038267 Chenopodium quinoa HOM05D000439 ORTHO05D001363 8.0e-10 68.2 131 38.2
CiPaw.01G008800 Carya illinoinensis HOM05D000439 ORTHO05D001363 1.0e-09 67.8 134 39.6
PSO675G8931 Papaver somniferum HOM05D000439 ORTHO05D001363 1.0e-09 67.8 124 38.7
Ah.03g146220 Amaranthus hybridus HOM05D000439 ORTHO05D001363 1.4e-09 67.4 134 36.6
Lalb_Chr16g0389031 Lupinus albus HOM05D000439 ORTHO05D001363 1.4e-09 67.4 129 34.1
Zm00001eb108320 Zea mays HOM05D000439 ORTHO05D001363 1.4e-09 67.4 134 35.8
TAR365G1139 Trochodendron aralioides HOM05D000439 ORTHO05D001363 1.8e-09 67.0 125 36.0
PSO732G0458 Papaver somniferum HOM05D000439 ORTHO05D001363 2.3e-09 66.6 124 38.7
CDE04G2575 Ceratophyllum demersum HOM05D000439 ORTHO05D001363 4.0e-09 65.9 105 33.3
Eucgr.K02358 Eucalyptus grandis HOM05D000439 ORTHO05D001363 5.2e-09 65.5 131 35.1
ECA232G4538 Erigeron canadensis HOM05D000439 ORTHO05D001363 6.8e-09 65.1 96 39.6
MBI07_g44864_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 6.8e-09 65.1 126 36.5
VMungo0331G1725 Vigna mungo HOM05D000439 ORTHO05D001363 1.2e-08 64.3 94 37.2
CsaV3_7G026740 Cucumis sativus L. HOM05D000439 ORTHO05D001363 1.5e-08 63.9 99 36.4
TAR636G0600 Trochodendron aralioides HOM05D000439 ORTHO05D001363 1.5e-08 63.9 180 30.6
Aqoxy5G00428 Aquilegia oxysepala HOM05D000439 ORTHO05D001363 2.0e-08 63.5 86 44.2
arahy.Tifrunner.gnm1.ann1.WFFD1N Arachis hypogaea HOM05D000439 ORTHO05D001363 2.0e-08 63.5 178 28.7
CSS0030820 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.6e-08 63.2 86 39.5
ClCG09G008320 Citrullus lanatus HOM05D000439 ORTHO05D001363 2.6e-08 63.2 84 39.3
MD05G1153400 Malus domestica HOM05D000439 ORTHO05D001363 2.6e-08 63.2 116 35.3
Sc16g0004910 Simmondsia chinensis HOM05D000439 ORTHO05D001363 3.4e-08 62.8 131 31.3
Actinidia34529 Actinidia chinensis HOM05D000439 ORTHO05D001363 4.4e-08 62.4 117 35.9
Ca_23160_v3 Cicer arietinum L. HOM05D000439 ORTHO05D001363 4.4e-08 62.4 95 35.8
QL09p045391 Quercus lobata HOM05D000439 ORTHO05D001363 4.4e-08 62.4 116 35.3
Duzib211G0280 Durio zibethinus HOM05D000439 ORTHO05D001363 5.7e-08 62.0 97 39.2
Manes.12G055300 Manihot esculenta HOM05D000439 ORTHO05D001363 5.7e-08 62.0 119 36.1
CANSAT25G0025 Cannabis sativa HOM05D000439 ORTHO05D001363 7.5e-08 61.6 116 35.3
CANSAT25G1996 Cannabis sativa HOM05D000439 ORTHO05D001363 7.5e-08 61.6 116 35.3
COL.COLO4_34278 Corchorus olitorius HOM05D000439 ORTHO05D001363 7.5e-08 61.6 95 41.1
Phvul.003G238500 Phaseolus vulgaris HOM05D000439 ORTHO05D001363 9.8e-08 61.2 130 35.4
Psat4g208400 Pisum sativum HOM05D000439 ORTHO05D001363 9.8e-08 61.2 122 32.0
arahy.Tifrunner.gnm1.ann1.0C3V8Z Arachis hypogaea HOM05D000439 ORTHO05D001363 1.3e-07 60.8 177 28.2
TPR.G17382 Trifolium pratense HOM05D000439 ORTHO05D001363 1.3e-07 60.8 91 37.4
EL10Ac5g10583 Beta vulgaris HOM05D000439 ORTHO05D001363 1.7e-07 60.5 134 33.6
MELO3C021129.2 Cucumis melo HOM05D000439 ORTHO05D001363 1.7e-07 60.5 122 33.6
SEGI_10765 Sequoiadendron giganteum HOM05D000439 ORTHO05D001363 1.7e-07 60.5 139 33.8
Thecc.01G207100 Theobroma cacao HOM05D000439 ORTHO05D001363 1.7e-07 60.5 95 38.9
Gohir.D07G202100 Gossypium hirsutum HOM05D000439 ORTHO05D001363 2.2e-07 60.1 88 39.8
Gorai.001G227000 Gossypium raimondii HOM05D000439 ORTHO05D001363 2.2e-07 60.1 88 39.8
MD10G1147800 Malus domestica HOM05D000439 ORTHO05D001363 2.2e-07 60.1 116 35.3
Nitab4.5_0002605g0050 Nicotiana tabacum HOM05D000439 ORTHO05D001363 2.2e-07 60.1 129 31.8
Sc06g0006580 Simmondsia chinensis HOM05D000439 ORTHO05D001363 2.2e-07 60.1 117 33.3
Ah.02g111020 Amaranthus hybridus HOM05D000439 ORTHO05D001363 2.8e-07 59.7 134 34.3
Hma1.2p1_1043F.1_g251270 Hydrangea macrophylla HOM05D000439 ORTHO05D001363 2.8e-07 59.7 132 33.3
Hma1.2p1_1368F.1_g278480 Hydrangea macrophylla HOM05D000439 ORTHO05D001363 2.8e-07 59.7 132 33.3
Duzib138G0503 Durio zibethinus HOM05D000439 ORTHO05D001363 3.7e-07 59.3 94 39.4
FAN15G3302 Fragaria x ananassa HOM05D000439 ORTHO05D001363 3.7e-07 59.3 116 33.6
Nn7g37467 Nelumbo nucifera HOM05D000439 ORTHO05D001363 3.7e-07 59.3 130 34.6
RcHm_v2.0_Chr6g0282181 Rosa chinensis HOM05D000439 ORTHO05D001363 3.7e-07 59.3 116 33.6
VMungo0331G1716 Vigna mungo HOM05D000439 ORTHO05D001363 3.7e-07 59.3 91 38.5
DCAR_018608 Daucus carota HOM05D000439 ORTHO05D001363 4.8e-07 58.9 131 30.5
Gohir.A07G195500 Gossypium hirsutum HOM05D000439 ORTHO05D001363 4.8e-07 58.9 116 33.6
Lj2C1111T3 Lonicera japonica HOM05D000439 ORTHO05D001363 4.8e-07 58.9 116 35.3
Lalb_Chr13g0290941 Lupinus albus HOM05D000439 ORTHO05D001363 4.8e-07 58.9 82 40.2
CAN.G419.7 Capsicum annuum HOM05D000439 ORTHO05D001363 6.3e-07 58.5 130 33.8
Ca_23161_v3 Cicer arietinum L. HOM05D000439 ORTHO05D001363 6.3e-07 58.5 88 36.4
Eucgr.I00737 Eucalyptus grandis HOM05D000439 ORTHO05D001363 6.3e-07 58.5 101 34.7
Medtr8g010160 Medicago truncatula HOM05D000439 ORTHO05D001363 6.3e-07 58.5 91 36.3
Nitab4.5_0006739g0010 Nicotiana tabacum HOM05D000439 ORTHO05D001363 6.3e-07 58.5 129 31.8
Sc17g0001560 Simmondsia chinensis HOM05D000439 ORTHO05D001363 6.3e-07 58.5 84 38.1
FvH4_2g17450 Fragaria vesca HOM05D000439 ORTHO05D001363 8.3e-07 58.2 116 32.8
Psat4g208360 Pisum sativum HOM05D000439 ORTHO05D001363 8.3e-07 58.2 134 31.3
PGR083G1451 Punica granatum HOM05D000439 ORTHO05D001363 8.3e-07 58.2 148 31.8
Sed0020305 Sechium edule HOM05D000439 ORTHO05D001363 8.3e-07 58.2 86 40.7
Duzib133G1231 Durio zibethinus HOM05D000439 ORTHO05D001363 1.1e-06 57.8 95 37.9
Lalb_Chr07g0194651 Lupinus albus HOM05D000439 ORTHO05D001363 1.1e-06 57.8 82 39.0
Phvul.010G036000 Phaseolus vulgaris HOM05D000439 ORTHO05D001363 1.1e-06 57.8 93 37.6
Sc16g0001520 Simmondsia chinensis HOM05D000439 ORTHO05D001363 1.1e-06 57.8 131 30.5
Peaxi162Scf00329g00011 Petunia axillaris HOM05D000439 ORTHO05D001363 1.4e-06 57.4 124 36.3
AL8G21190 Arabidopsis lyrata HOM05D000439 ORTHO05D001363 1.8e-06 57.0 108 36.1
Cfa010575 Carpinus fangiana HOM05D000439 ORTHO05D001363 1.8e-06 57.0 77 41.6
Sed0018459 Sechium edule HOM05D000439 ORTHO05D001363 1.8e-06 57.0 55 50.9
TWI18G0174 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 1.8e-06 57.0 82 37.8
CSS0005902 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.4e-06 56.6 175 26.9
CSS0033281 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.4e-06 56.6 175 26.9
Glyma.03G096400 Glycine max HOM05D000439 ORTHO05D001363 2.4e-06 56.6 128 32.8
Ca_13937_v3 Cicer arietinum L. HOM05D000439 ORTHO05D001363 3.1e-06 56.2 130 32.3
Nitab4.5_0001348g0110 Nicotiana tabacum HOM05D000439 ORTHO05D001363 3.1e-06 56.2 86 38.4
Nitab4.5_0007516g0020 Nicotiana tabacum HOM05D000439 ORTHO05D001363 3.1e-06 56.2 132 33.3
Hund09486 Selenicereus undatus HOM05D000439 ORTHO05D001363 3.1e-06 56.2 134 29.9
TAR362G0828 Trochodendron aralioides HOM05D000439 ORTHO05D001363 3.1e-06 56.2 82 39.0
AUR62003954 Chenopodium quinoa HOM05D000439 ORTHO05D001363 4.1e-06 55.8 131 35.9
Prupe.8G186800 Prunus persica HOM05D000439 ORTHO05D001363 4.1e-06 55.8 79 39.2
CiPaw.14G044300 Carya illinoinensis HOM05D000439 ORTHO05D001363 5.4e-06 55.5 77 40.3
Glyma.16G079100 Glycine max HOM05D000439 ORTHO05D001363 7.0e-06 55.1 128 32.0
Lj3g0012498 Lotus japonicus HOM05D000439 ORTHO05D001363 7.0e-06 55.1 82 37.8
Lalb_Chr12g0210231 Lupinus albus HOM05D000439 ORTHO05D001363 7.0e-06 55.1 82 37.8
Solyc04g008840.3 Solanum lycopersicum HOM05D000439 ORTHO05D001363 7.0e-06 55.1 103 37.9
AUR62008064 Chenopodium quinoa HOM05D000439 ORTHO05D001363 9.1e-06 54.7 134 32.1
AUR62028641 Chenopodium quinoa HOM05D000439 ORTHO05D001363 9.1e-06 54.7 134 32.1
Dinv28789 Davidia involucrata HOM05D000439 ORTHO05D001363 9.1e-06 54.7 132 30.3
Glyma.03G096300 Glycine max HOM05D000439 ORTHO05D001363 9.1e-06 54.7 91 34.1
Phvul.010G035900 Phaseolus vulgaris HOM05D000439 ORTHO05D001363 9.1e-06 54.7 94 35.1


User provided reference genes

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