Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.5e-291 1005.4 491 100.0
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 2.5e-204 715.7 488 72.3
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 4.3e-201 704.9 475 72.8
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 5.1e-194 681.4 470 70.0
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 8.2e-192 674.1 491 68.6
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 1.3e-189 666.8 479 68.7
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 3.8e-189 665.2 476 66.6
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 8.5e-189 664.1 476 67.9
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 1.4e-188 663.3 467 69.6
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 1.9e-188 662.9 474 69.2
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 3.2e-188 662.1 430 74.2
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 1.6e-187 659.8 440 71.4
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 7.9e-187 657.5 473 67.7
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 2.3e-186 656.0 461 68.5
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 6.7e-186 654.4 486 66.9
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 7.4e-185 651.0 480 68.1
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 9.7e-185 650.6 476 66.0
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 2.2e-184 649.4 438 69.2
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 8.2e-184 647.5 479 66.0
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 8.2e-184 647.5 474 66.7
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.4e-183 646.7 475 68.2
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 2.4e-183 646.0 479 67.0
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 5.3e-183 644.8 419 72.1
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 6.9e-183 644.4 445 67.6
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 9.1e-183 644.0 481 65.3
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 1.5e-182 643.3 435 70.6
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 1.5e-182 643.3 478 63.8
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 3.4e-182 642.1 518 61.6
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 7.7e-182 641.0 434 69.1
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 1.0e-181 640.6 478 65.3
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 1.3e-181 640.2 479 67.4
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 8.5e-181 637.5 479 65.3
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 1.9e-180 636.3 479 66.8
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 2.5e-180 636.0 484 65.1
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 7.2e-180 634.4 488 66.4
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 9.4e-180 634.0 425 72.2
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.6e-179 633.3 425 71.1
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 2.7e-179 632.5 460 66.5
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 3.0e-178 629.0 480 64.6
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 3.9e-178 628.6 498 64.1
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 3.9e-178 628.6 470 66.6
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 2.0e-177 626.3 475 66.3
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 2.6e-177 625.9 498 64.1
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 3.3e-177 625.5 480 65.0
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 4.4e-177 625.2 471 64.8
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 4.8e-176 621.7 474 63.7
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 4.8e-176 621.7 471 64.1
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 6.3e-176 621.3 471 64.8
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 8.2e-176 620.9 481 64.9
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 2.4e-175 619.4 508 62.6
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 5.3e-175 618.2 486 63.4
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 7.0e-175 617.8 466 62.2
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 7.0e-175 617.8 418 70.3
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 1.2e-174 617.1 481 64.2
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 1.3e-173 613.6 470 61.9
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 1.7e-173 613.2 468 62.0
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 2.2e-173 612.8 482 62.7
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 2.9e-173 612.5 474 62.0
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 3.8e-173 612.1 476 64.9
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 3.2e-172 609.0 475 61.7
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.6e-171 605.5 493 61.5
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 6.1e-171 604.7 520 58.7
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 1.0e-170 604.0 493 61.3
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 1.8e-170 603.2 479 62.6
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 1.5e-169 600.1 481 63.2
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 2.0e-169 599.7 459 64.5
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 6.3e-168 594.7 470 61.9
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 8.2e-168 594.3 468 61.1
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 8.2e-168 594.3 476 62.6
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 1.1e-167 594.0 470 62.1
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 9.1e-167 590.9 435 65.5
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 5.9e-166 588.2 388 71.4
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 2.9e-165 585.9 486 60.3
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 6.5e-165 584.7 493 58.0
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 1.1e-164 583.9 412 66.0
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 2.5e-164 582.8 419 66.1
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 8.0e-163 577.8 449 62.4
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 2.6e-161 572.8 389 69.2
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.8e-160 569.3 495 58.2
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 3.7e-160 568.9 405 68.1
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 5.3e-159 565.1 387 69.8
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 5.3e-159 565.1 431 65.4
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 3.0e-154 549.3 384 67.7
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 8.8e-154 547.7 391 65.2
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 7.5e-153 544.7 457 60.0
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.2e-147 527.3 495 55.6
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 3.6e-147 525.8 348 73.6
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 1.0e-146 524.2 465 58.7
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 5.0e-141 505.4 296 78.4
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 2.8e-139 499.6 360 66.7
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 1.0e-138 497.7 497 53.9
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.2e-134 484.2 531 51.2
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 2.7e-134 483.0 376 63.0
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 1.3e-133 480.7 422 55.9
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 3.3e-132 476.1 423 55.8
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 6.4e-128 461.8 382 60.7
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 1.0e-125 454.5 311 70.4
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 3.6e-123 446.0 364 56.3
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 2.6e-121 439.9 383 61.1
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 9.2e-119 431.4 340 56.8
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 4.3e-108 396.0 285 67.0
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 3.4e-97 359.8 252 70.2
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 1.3e-96 357.8 252 69.8
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 8.4e-96 355.1 310 58.4
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 6.9e-90 335.5 373 45.6
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 2.1e-86 323.9 236 66.1
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 2.1e-86 323.9 343 45.2
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 2.7e-86 323.6 236 65.7
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 5.1e-85 319.3 179 78.8
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 2.1e-83 313.9 284 54.6
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 4.1e-82 309.7 246 62.2
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 4.1e-82 309.7 246 62.2
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 1.4e-69 268.1 401 36.9
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.1e-66 258.5 331 42.0
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 1.4e-61 241.5 186 66.7
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 1.3e-59 235.0 232 54.3
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 8.2e-59 232.3 225 54.7
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 3.1e-58 230.3 178 65.2
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 4.1e-58 229.9 218 55.0
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 5.2e-45 186.4 106 78.3
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 2.2e-43 181.0 365 34.2
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 2.1e-38 164.5 98 69.4
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 2.1e-30 137.9 340 30.9
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 4.7e-30 136.7 98 62.2
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 1.2e-28 132.1 73 78.1
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 3.4e-20 104.0 55 78.2
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 4.1e-18 97.1 131 44.3
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 4.6e-17 93.6 377 24.4
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 9.5e-07 59.3 104 40.4
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 2.1e-06 58.2 83 30.1


User provided reference genes

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